RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 FKRPQ9H9S5 495 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 FOLH1BQ9HBA9 442 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 HCN3Q9P1Z3 774 aa11.62□□□□□ -0.55
SFSWAP-208ENST00000539506 A0A087WV48 116 aa11.61□□□□□ -0.55
SFSWAP-208ENST00000539506 SGK494L7N484 410 aa11.61□□□□□ -0.55
SFSWAP-208ENST00000539506 UCHL1P09936 223 aa11.61□□□□□ -0.55
SFSWAP-208ENST00000539506 TNFRSF17Q02223 184 aa11.61□□□□□ -0.55
SFSWAP-208ENST00000539506 CAMK2DQ13557 499 aa11.61□□□□□ -0.55
SFSWAP-208ENST00000539506 GPR68Q15743 365 aa11.61□□□□□ -0.55
SFSWAP-208ENST00000539506 PGGHGQ32M88 737 aa11.61□□□□□ -0.55
SFSWAP-208ENST00000539506 ITPRIPL2Q3MIP1 535 aa11.61□□□□□ -0.55
SFSWAP-208ENST00000539506 CDC73Q6P1J9 531 aa11.61□□□□□ -0.55
SFSWAP-208ENST00000539506 MTSS1LQ765P7 747 aa11.61□□□□□ -0.55
SFSWAP-208ENST00000539506 BOLLQ8N9W6 283 aaKnown RBP11.61□□□□□ -0.55
SFSWAP-208ENST00000539506 OR2T4Q8NH00 348 aa11.61□□□□□ -0.55
SFSWAP-208ENST00000539506 C4orf36Q96KX1 117 aa11.61□□□□□ -0.55
SFSWAP-208ENST00000539506 SDF2Q99470 211 aa11.61□□□□□ -0.55
SFSWAP-208ENST00000539506 TRAF4Q9BUZ4 470 aaPredicted RBP11.61□□□□□ -0.55
SFSWAP-208ENST00000539506 J3QRE1 110 aa11.61□□□□□ -0.55
SFSWAP-208ENST00000539506 PEX12O00623 359 aa11.61□□□□□ -0.55
SFSWAP-208ENST00000539506 LDB3O75112 727 aa11.61□□□□□ -0.55
SFSWAP-208ENST00000539506 VEGFCP49767 419 aa11.61□□□□□ -0.55
SFSWAP-208ENST00000539506 ZP1P60852 638 aa11.61□□□□□ -0.55
SFSWAP-208ENST00000539506 TP53I3Q53FA7 332 aa11.61□□□□□ -0.55
SFSWAP-208ENST00000539506 SSX6Q7RTT6 188 aa11.61□□□□□ -0.55
SFSWAP-208ENST00000539506 ZNF433Q8N7K0 673 aaPredicted RBP11.61□□□□□ -0.55
SFSWAP-208ENST00000539506 MS4A4EQ96PG1 132 aa11.61□□□□□ -0.55
SFSWAP-208ENST00000539506 CYSLTR2Q9NS75 346 aa11.61□□□□□ -0.55
SFSWAP-208ENST00000539506 LYARQ9NX58 379 aaKnown RBP11.61□□□□□ -0.55
SFSWAP-208ENST00000539506 ADAM30Q9UKF2 790 aa11.61□□□□□ -0.55
SFSWAP-208ENST00000539506 WDR45Q9Y484 360 aa11.61□□□□□ -0.55
SFSWAP-208ENST00000539506 COLEC10Q9Y6Z7 277 aa11.61□□□□□ -0.55
SFSWAP-208ENST00000539506 RPS10-NUDT3A0A1W2PQS6 291 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 RGS9O75916 674 aaPredicted RBP11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 SOX30O94993 753 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 TPOP07202 933 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 H2AFB2P0C5Z0 115 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 MAKP20794 623 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 GRPRP30550 384 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 STAT5AP42229 794 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 LSSP48449 732 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 RAB14P61106 215 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 PUDPQ08623 228 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 SNTB2Q13425 540 aaKnown RBP11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 MFSD13AQ14CX5 517 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 FHL5Q5TD97 284 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 FAAH2Q6GMR7 532 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 SLC25A25Q6KCM7 469 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 FAM198BQ6UWH4 519 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 CFAP77Q6ZQR2 320 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 OR5J2Q8NH18 312 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 NT5CQ8TCD5 201 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 PATE1Q8WXA2 126 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 ST8SIA2Q92186 375 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 BMFQ96LC9 184 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 PBX4Q9BYU1 374 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 B3GNT4Q9C0J1 378 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 UBQLN3Q9H347 655 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 SRMSQ9H3Y6 488 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 ANKRD19PQ9H560 264 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 MTHFD2LQ9H903 347 aaPredicted RBP11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 BABAM2Q9NXR7 383 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 EXOGQ9Y2C4 368 aaKnown RBP11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 TRAV27A0A087WT01 109 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 LYPD3O95274 346 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 IGHA1P01876 353 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 IFNGR2P38484 337 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 PSMB10P40306 273 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 RPS15AP62244 130 aaKnown RBP11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 TUSC1Q2TAM9 212 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 ARHGAP11BQ3KRB8 267 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 HES5Q5TA89 166 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 RTL4Q6ZR62 310 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 ZNF614Q8N883 585 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 OR5T3Q8NGG3 340 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 ZNF671Q8TAW3 534 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 OSTF1Q92882 214 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 SCMH1Q96GD3 660 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 DERL3Q96Q80 235 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 SLC25A18Q9H1K4 315 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 ISYNA1Q9NPH2 558 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 DLL4Q9NR61 685 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 USP36Q9P275 1121 aaKnown RBP11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 UBQLN2Q9UHD9 624 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 DAPP1Q9UN19 280 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 CNTRLQ7Z7A1 2325 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 M0R233 179 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 IMPA2O14732 288 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 KCNJ13O60928 360 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 THBS2P35442 1172 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 NUDT1P36639 197 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 BLVRAP53004 296 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 NHLRC1Q6VVB1 395 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 LINGO2Q7L985 606 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 ACBD7Q8N6N7 88 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 OR4K14Q8NGD5 310 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 ABHD4Q8TB40 342 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 NXPE2Q96DL1 559 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 SORCS2Q96PQ0 1159 aa11.6□□□□□ -0.55
SFSWAP-208ENST00000539506 RANBP3Q9H6Z4 567 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms