RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 HDGFL3Q9Y3E1 203 aa19.68■□□□□ 0.74
SCARB1-206ENST00000539320 RNF115Q9Y4L5 304 aa19.68■□□□□ 0.74
SCARB1-206ENST00000539320 TLN2Q9Y4G6 2542 aa19.67■□□□□ 0.74
SCARB1-206ENST00000539320 IGKV3D-15A0A087WSY6 115 aa19.67■□□□□ 0.74
SCARB1-206ENST00000539320 RFXANKO14593 260 aa19.67■□□□□ 0.74
SCARB1-206ENST00000539320 AP3D1O14617 1153 aa19.67■□□□□ 0.74
SCARB1-206ENST00000539320 ADAM11O75078 769 aa19.67■□□□□ 0.74
SCARB1-206ENST00000539320 PMS2P2O95744 297 aa19.67■□□□□ 0.74
SCARB1-206ENST00000539320 IL6P05231 212 aa19.67■□□□□ 0.74
SCARB1-206ENST00000539320 NR2F1P10589 423 aa19.67■□□□□ 0.74
SCARB1-206ENST00000539320 EDNRAP25101 427 aa19.67■□□□□ 0.74
SCARB1-206ENST00000539320 IDH2P48735 452 aaKnown RBP19.67■□□□□ 0.74
SCARB1-206ENST00000539320 PTH2RP49190 550 aa19.67■□□□□ 0.74
SCARB1-206ENST00000539320 GNA13Q14344 377 aa19.67■□□□□ 0.74
SCARB1-206ENST00000539320 CAPRIN1Q14444 709 aaKnown RBP19.67■□□□□ 0.74
SCARB1-206ENST00000539320 SLC9B1Q4ZJI4 515 aa19.67■□□□□ 0.74
SCARB1-206ENST00000539320 ZC3HAV1Q7Z2W4 902 aaKnown RBP19.67■□□□□ 0.74
SCARB1-206ENST00000539320 MAVSQ7Z434 540 aa19.67■□□□□ 0.74
SCARB1-206ENST00000539320 MTDHQ86UE4 582 aaKnown RBP19.67■□□□□ 0.74
SCARB1-206ENST00000539320 HSD17B8Q92506 261 aa19.67■□□□□ 0.74
SCARB1-206ENST00000539320 AKAP1Q92667 903 aaKnown RBP eCLIP19.67■□□□□ 0.74
SCARB1-206ENST00000539320 ZNF75CPQ92670 426 aaPredicted RBP19.67■□□□□ 0.74
SCARB1-206ENST00000539320 ZNF775Q96BV0 537 aaPredicted RBP19.67■□□□□ 0.74
SCARB1-206ENST00000539320 ARL5BQ96KC2 179 aa19.67■□□□□ 0.74
SCARB1-206ENST00000539320 COX4I2Q96KJ9 171 aa19.67■□□□□ 0.74
SCARB1-206ENST00000539320 SMR3AQ99954 134 aa19.67■□□□□ 0.74
SCARB1-206ENST00000539320 TMBIM4Q9HC24 238 aa19.67■□□□□ 0.74
SCARB1-206ENST00000539320 ZIM2Q9NZV7 527 aa19.67■□□□□ 0.74
SCARB1-206ENST00000539320 DNPH1O43598 174 aa19.66■□□□□ 0.74
SCARB1-206ENST00000539320 TMCC2O75069 709 aa19.66■□□□□ 0.74
SCARB1-206ENST00000539320 SLC22A3O75751 556 aa19.66■□□□□ 0.74
SCARB1-206ENST00000539320 LYZL6O75951 148 aa19.66■□□□□ 0.74
SCARB1-206ENST00000539320 HOXB4P17483 251 aaPredicted RBP19.66■□□□□ 0.74
SCARB1-206ENST00000539320 COX5AP20674 150 aa19.66■□□□□ 0.74
SCARB1-206ENST00000539320 FKBP2P26885 142 aaKnown RBP19.66■□□□□ 0.74
SCARB1-206ENST00000539320 MAGEA8P43361 318 aa19.66■□□□□ 0.74
SCARB1-206ENST00000539320 HTR3AP46098 478 aa19.66■□□□□ 0.74
SCARB1-206ENST00000539320 CLK1P49759 484 aaKnown RBP19.66■□□□□ 0.74
SCARB1-206ENST00000539320 PDK3Q15120 406 aa19.66■□□□□ 0.74
SCARB1-206ENST00000539320 NCMAPQ5T1S8 102 aa19.66■□□□□ 0.74
SCARB1-206ENST00000539320 MRPL2Q5T653 305 aaKnown RBP19.66■□□□□ 0.74
SCARB1-206ENST00000539320 ZNF100Q8IYN0 542 aa19.66■□□□□ 0.74
SCARB1-206ENST00000539320 PIGXQ8TBF5 258 aa19.66■□□□□ 0.74
SCARB1-206ENST00000539320 OR11A1Q9GZK7 315 aa19.66■□□□□ 0.74
SCARB1-206ENST00000539320 CXorf56Q9H5V9 222 aa19.66■□□□□ 0.74
SCARB1-206ENST00000539320 ESRP2Q9H6T0 727 aaKnown RBP19.66■□□□□ 0.74
SCARB1-206ENST00000539320 P2RX2Q9UBL9 471 aa19.66■□□□□ 0.74
SCARB1-206ENST00000539320 CSPG4Q6UVK1 2322 aa19.66■□□□□ 0.74
SCARB1-206ENST00000539320 CLOCKO15516 846 aa19.65■□□□□ 0.74
SCARB1-206ENST00000539320 CNOT4O95628 575 aaKnown RBP19.65■□□□□ 0.74
SCARB1-206ENST00000539320 DBIP07108 87 aaKnown RBP19.65■□□□□ 0.74
SCARB1-206ENST00000539320 CD3EP07766 207 aa19.65■□□□□ 0.74
SCARB1-206ENST00000539320 STK11Q15831 433 aa19.65■□□□□ 0.74
SCARB1-206ENST00000539320 GSTA3Q16772 222 aa19.65■□□□□ 0.74
SCARB1-206ENST00000539320 BEND6Q5SZJ8 279 aaPredicted RBP19.65■□□□□ 0.74
SCARB1-206ENST00000539320 SEZ6L2Q6UXD5 910 aa19.65■□□□□ 0.74
SCARB1-206ENST00000539320 MSANTD1Q6ZTZ1 278 aa19.65■□□□□ 0.74
SCARB1-206ENST00000539320 ADGRG3Q86Y34 549 aa19.65■□□□□ 0.74
SCARB1-206ENST00000539320 PIWIL2Q8TC59 973 aaKnown RBP19.65■□□□□ 0.74
SCARB1-206ENST00000539320 PMM1Q92871 262 aa19.65■□□□□ 0.74
SCARB1-206ENST00000539320 DNAJA3Q96EY1 480 aa19.65■□□□□ 0.74
SCARB1-206ENST00000539320 MTHFD2LQ9H903 347 aaPredicted RBP19.65■□□□□ 0.74
SCARB1-206ENST00000539320 SDR39U1Q9NRG7 319 aaPredicted RBP19.65■□□□□ 0.74
SCARB1-206ENST00000539320 SLC6A13Q9NSD5 602 aa19.65■□□□□ 0.74
SCARB1-206ENST00000539320 NSD1Q96L73 2696 aaPredicted RBP19.65■□□□□ 0.74
SCARB1-206ENST00000539320 TMED7-TICAM2A0A0A6YYA0 188 aa19.64■□□□□ 0.73
SCARB1-206ENST00000539320 ZNF716A6NP11 495 aa19.64■□□□□ 0.73
SCARB1-206ENST00000539320 H7C1Q1 480 aa19.64■□□□□ 0.73
SCARB1-206ENST00000539320 FAAHO00519 579 aa19.64■□□□□ 0.73
SCARB1-206ENST00000539320 UQCRBP14927 111 aa19.64■□□□□ 0.73
SCARB1-206ENST00000539320 PAX1P15863 534 aa19.64■□□□□ 0.73
SCARB1-206ENST00000539320 IL7RP16871 459 aa19.64■□□□□ 0.73
SCARB1-206ENST00000539320 CCNA2P20248 432 aa19.64■□□□□ 0.73
SCARB1-206ENST00000539320 POLR2HP52434 150 aaKnown RBP19.64■□□□□ 0.73
SCARB1-206ENST00000539320 ADAM5Q6NVV9 412 aa19.64■□□□□ 0.73
SCARB1-206ENST00000539320 CLEC9AQ6UXN8 241 aa19.64■□□□□ 0.73
SCARB1-206ENST00000539320 PEX5LQ8IYB4 626 aa19.64■□□□□ 0.73
SCARB1-206ENST00000539320 OR52B2Q96RD2 323 aa19.64■□□□□ 0.73
SCARB1-206ENST00000539320 RMND5AQ9H871 391 aa19.64■□□□□ 0.73
SCARB1-206ENST00000539320 OSGIN1Q9UJX0 560 aa19.64■□□□□ 0.73
SCARB1-206ENST00000539320 NOSIPQ9Y314 301 aaKnown RBP19.64■□□□□ 0.73
SCARB1-206ENST00000539320 TMED7Q9Y3B3 224 aa19.64■□□□□ 0.73
SCARB1-206ENST00000539320 CFAP73A6NFT4 308 aa19.63■□□□□ 0.73
SCARB1-206ENST00000539320 FAM171A2A8MVW0 826 aa19.63■□□□□ 0.73
SCARB1-206ENST00000539320 GPR171O14626 319 aa19.63■□□□□ 0.73
SCARB1-206ENST00000539320 KLF11O14901 512 aa19.63■□□□□ 0.73
SCARB1-206ENST00000539320 UBDO15205 165 aa19.63■□□□□ 0.73
SCARB1-206ENST00000539320 ANP32DO95626 131 aa19.63■□□□□ 0.73
SCARB1-206ENST00000539320 ZCCHC18P0CG32 403 aa19.63■□□□□ 0.73
SCARB1-206ENST00000539320 IGHV1-2P23083 117 aa19.63■□□□□ 0.73
SCARB1-206ENST00000539320 MVDP53602 400 aa19.63■□□□□ 0.73
SCARB1-206ENST00000539320 SLC16A1P53985 500 aa19.63■□□□□ 0.73
SCARB1-206ENST00000539320 OR2B6P58173 313 aa19.63■□□□□ 0.73
SCARB1-206ENST00000539320 EPS8Q12929 822 aa19.63■□□□□ 0.73
SCARB1-206ENST00000539320 LIN52Q52LA3 116 aa19.63■□□□□ 0.73
SCARB1-206ENST00000539320 ZNF440Q8IYI8 595 aa19.63■□□□□ 0.73
SCARB1-206ENST00000539320 OR9I1Q8NGQ6 314 aa19.63■□□□□ 0.73
SCARB1-206ENST00000539320 APH1AQ96BI3 265 aa19.63■□□□□ 0.73
SCARB1-206ENST00000539320 DDIT4LQ96D03 193 aa19.63■□□□□ 0.73
SCARB1-206ENST00000539320 BDH2Q9BUT1 245 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms