RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 MAGEB18Q96M61 343 aa13.29□□□□□ -0.28
RAB40B-202ENST00000538809 OR11A1Q9GZK7 315 aa13.29□□□□□ -0.28
RAB40B-202ENST00000538809 HEATR1Q9H583 2144 aaKnown RBP13.29□□□□□ -0.28
RAB40B-202ENST00000538809 GP6Q9HCN6 339 aa13.29□□□□□ -0.28
RAB40B-202ENST00000538809 CHRNA9Q9UGM1 479 aa13.29□□□□□ -0.28
RAB40B-202ENST00000538809 PRSS50Q9UI38 385 aa13.29□□□□□ -0.28
RAB40B-202ENST00000538809 GPR52Q9Y2T5 361 aa13.29□□□□□ -0.28
RAB40B-202ENST00000538809 PCDHB14Q9Y5E9 798 aa13.29□□□□□ -0.28
RAB40B-202ENST00000538809 USF3Q68DE3 2245 aa13.29□□□□□ -0.28
RAB40B-202ENST00000538809 ZFHX3Q15911 3703 aa13.28□□□□□ -0.28
RAB40B-202ENST00000538809 CYTIPO60759 359 aa13.28□□□□□ -0.28
RAB40B-202ENST00000538809 ANP32DO95626 131 aa13.28□□□□□ -0.28
RAB40B-202ENST00000538809 ADAP00813 363 aa13.28□□□□□ -0.28
RAB40B-202ENST00000538809 TFPTP0C1Z6 253 aa13.28□□□□□ -0.28
RAB40B-202ENST00000538809 IL32P24001 234 aa13.28□□□□□ -0.28
RAB40B-202ENST00000538809 APOBEC1P41238 236 aaKnown RBP13.28□□□□□ -0.28
RAB40B-202ENST00000538809 IDH2P48735 452 aaKnown RBP13.28□□□□□ -0.28
RAB40B-202ENST00000538809 ATP4BP51164 291 aa13.28□□□□□ -0.28
RAB40B-202ENST00000538809 AQP5P55064 265 aa13.28□□□□□ -0.28
RAB40B-202ENST00000538809 NKX6-1P78426 367 aaPredicted RBP13.28□□□□□ -0.28
RAB40B-202ENST00000538809 LRIF1Q5T3J3 769 aa13.28□□□□□ -0.28
RAB40B-202ENST00000538809 MRPL2Q5T653 305 aaKnown RBP13.28□□□□□ -0.28
RAB40B-202ENST00000538809 ABLIM2Q6H8Q1 611 aa13.28□□□□□ -0.28
RAB40B-202ENST00000538809 SLC2A7Q6PXP3 512 aa13.28□□□□□ -0.28
RAB40B-202ENST00000538809 BLOC1S3Q6QNY0 202 aa13.28□□□□□ -0.28
RAB40B-202ENST00000538809 ZNF704Q6ZNC4 412 aaPredicted RBP13.28□□□□□ -0.28
RAB40B-202ENST00000538809 TMPPEQ6ZT21 453 aa13.28□□□□□ -0.28
RAB40B-202ENST00000538809 GRINAQ7Z429 371 aa13.28□□□□□ -0.28
RAB40B-202ENST00000538809 MSRB3Q8IXL7 192 aa13.28□□□□□ -0.28
RAB40B-202ENST00000538809 STEAP2Q8NFT2 490 aa13.28□□□□□ -0.28
RAB40B-202ENST00000538809 DYDC1Q8WWB3 177 aa13.28□□□□□ -0.28
RAB40B-202ENST00000538809 ARL5BQ96KC2 179 aa13.28□□□□□ -0.28
RAB40B-202ENST00000538809 TACO1Q9BSH4 297 aaKnown RBP13.28□□□□□ -0.28
RAB40B-202ENST00000538809 MTHFD2LQ9H903 347 aaPredicted RBP13.28□□□□□ -0.28
RAB40B-202ENST00000538809 BCO1Q9HAY6 547 aa13.28□□□□□ -0.28
RAB40B-202ENST00000538809 DLL4Q9NR61 685 aa13.28□□□□□ -0.28
RAB40B-202ENST00000538809 SPIN1Q9Y657 262 aaPredicted RBP13.28□□□□□ -0.28
RAB40B-202ENST00000538809 ZNF814B7Z6K7 855 aa13.27□□□□□ -0.29
RAB40B-202ENST00000538809 FAAHO00519 579 aa13.27□□□□□ -0.29
RAB40B-202ENST00000538809 SMPD2O60906 423 aa13.27□□□□□ -0.29
RAB40B-202ENST00000538809 BCHEP06276 602 aa13.27□□□□□ -0.29
RAB40B-202ENST00000538809 BMP2P12643 396 aa13.27□□□□□ -0.29
RAB40B-202ENST00000538809 IL7RP16871 459 aa13.27□□□□□ -0.29
RAB40B-202ENST00000538809 FPR1P21462 350 aa13.27□□□□□ -0.29
RAB40B-202ENST00000538809 HOXC12P31275 282 aa13.27□□□□□ -0.29
RAB40B-202ENST00000538809 CRATP43155 626 aa13.27□□□□□ -0.29
RAB40B-202ENST00000538809 OR3A2P47893 321 aa13.27□□□□□ -0.29
RAB40B-202ENST00000538809 DSTNP60981 165 aa13.27□□□□□ -0.29
RAB40B-202ENST00000538809 STX1BP61266 288 aa13.27□□□□□ -0.29
RAB40B-202ENST00000538809 CSNK2A1P68400 391 aaPredicted RBP13.27□□□□□ -0.29
RAB40B-202ENST00000538809 RPS26P11Q5JNZ5 115 aaPredicted RBP13.27□□□□□ -0.29
RAB40B-202ENST00000538809 C6orf10Q5SRN2 563 aa13.27□□□□□ -0.29
RAB40B-202ENST00000538809 SFRP5Q5T4F7 317 aa13.27□□□□□ -0.29
RAB40B-202ENST00000538809 ADGRG3Q86Y34 549 aa13.27□□□□□ -0.29
RAB40B-202ENST00000538809 GOLGA6L1Q8N7Z2 621 aa13.27□□□□□ -0.29
RAB40B-202ENST00000538809 SLC38A5Q8WUX1 472 aa13.27□□□□□ -0.29
RAB40B-202ENST00000538809 KISS1RQ969F8 398 aaPredicted RBP13.27□□□□□ -0.29
RAB40B-202ENST00000538809 GSX1Q9H4S2 264 aaPredicted RBP13.27□□□□□ -0.29
RAB40B-202ENST00000538809 TMEM45AQ9NWC5 275 aa13.27□□□□□ -0.29
RAB40B-202ENST00000538809 SLC25A37Q9NYZ2 338 aa13.27□□□□□ -0.29
RAB40B-202ENST00000538809 P2RX2Q9UBL9 471 aa13.27□□□□□ -0.29
RAB40B-202ENST00000538809 GMEB1Q9Y692 573 aa13.27□□□□□ -0.29
RAB40B-202ENST00000538809 A0A096LPI6 279 aa13.26□□□□□ -0.29
RAB40B-202ENST00000538809 TRBV5-3A0A0A0MS03 114 aa13.26□□□□□ -0.29
RAB40B-202ENST00000538809 TMED7-TICAM2A0A0A6YYA0 188 aa13.26□□□□□ -0.29
RAB40B-202ENST00000538809 LYZL6O75951 148 aa13.26□□□□□ -0.29
RAB40B-202ENST00000538809 DBIP07108 87 aaKnown RBP13.26□□□□□ -0.29
RAB40B-202ENST00000538809 NR1H2P55055 460 aa13.26□□□□□ -0.29
RAB40B-202ENST00000538809 IRX1P78414 480 aaPredicted RBP13.26□□□□□ -0.29
RAB40B-202ENST00000538809 EPS8Q12929 822 aa13.26□□□□□ -0.29
RAB40B-202ENST00000538809 RGNQ15493 299 aa13.26□□□□□ -0.29
RAB40B-202ENST00000538809 TAB1Q15750 504 aa13.26□□□□□ -0.29
RAB40B-202ENST00000538809 PAGE3Q5JUK9 113 aa13.26□□□□□ -0.29
RAB40B-202ENST00000538809 Q5PR19 223 aa13.26□□□□□ -0.29
RAB40B-202ENST00000538809 ZNF836Q6ZNA1 936 aa13.26□□□□□ -0.29
RAB40B-202ENST00000538809 C20orf204Q6ZNR8 217 aa13.26□□□□□ -0.29
RAB40B-202ENST00000538809 BHLHA15Q7RTS1 189 aaPredicted RBP13.26□□□□□ -0.29
RAB40B-202ENST00000538809 ATG4DQ86TL0 474 aaPredicted RBP13.26□□□□□ -0.29
RAB40B-202ENST00000538809 VRK2Q86Y07 508 aa13.26□□□□□ -0.29
RAB40B-202ENST00000538809 P3H2Q8IVL5 708 aa13.26□□□□□ -0.29
RAB40B-202ENST00000538809 PEX5LQ8IYB4 626 aa13.26□□□□□ -0.29
RAB40B-202ENST00000538809 PIGTQ969N2 578 aa13.26□□□□□ -0.29
RAB40B-202ENST00000538809 SPDL1Q96EA4 605 aa13.26□□□□□ -0.29
RAB40B-202ENST00000538809 PERPQ96FX8 193 aa13.26□□□□□ -0.29
RAB40B-202ENST00000538809 TMEM19Q96HH6 336 aa13.26□□□□□ -0.29
RAB40B-202ENST00000538809 OR10A4Q9H209 315 aa13.26□□□□□ -0.29
RAB40B-202ENST00000538809 ZNF385DQ9H6B1 395 aa13.26□□□□□ -0.29
RAB40B-202ENST00000538809 RLIMQ9NVW2 624 aa13.26□□□□□ -0.29
RAB40B-202ENST00000538809 CALML5Q9NZT1 146 aa13.26□□□□□ -0.29
RAB40B-202ENST00000538809 SLAMF8Q9P0V8 285 aa13.26□□□□□ -0.29
RAB40B-202ENST00000538809 OSGIN1Q9UJX0 560 aa13.26□□□□□ -0.29
RAB40B-202ENST00000538809 TMED7Q9Y3B3 224 aa13.26□□□□□ -0.29
RAB40B-202ENST00000538809 CHST2Q9Y4C5 530 aa13.26□□□□□ -0.29
RAB40B-202ENST00000538809 TMEM72A0PK05 275 aa13.25□□□□□ -0.29
RAB40B-202ENST00000538809 CDHR4A6H8M9 788 aa13.25□□□□□ -0.29
RAB40B-202ENST00000538809 ZNF724A8MTY0 619 aa13.25□□□□□ -0.29
RAB40B-202ENST00000538809 CLIC1O00299 241 aa13.25□□□□□ -0.29
RAB40B-202ENST00000538809 EDF1O60869 148 aaKnown RBP13.25□□□□□ -0.29
RAB40B-202ENST00000538809 RAMP1O60894 148 aa13.25□□□□□ -0.29
RAB40B-202ENST00000538809 PMS2P2O95744 297 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 136.3 ms