RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 VMP1Q96GC9 406 aa18.65■□□□□ 0.58
DDX55-205ENST00000538744 LPAR4Q99677 370 aa18.65■□□□□ 0.58
DDX55-205ENST00000538744 RTN4RQ9BZR6 473 aa18.65■□□□□ 0.58
DDX55-205ENST00000538744 ARRDC1-AS1Q9H2J1 176 aa18.65■□□□□ 0.58
DDX55-205ENST00000538744 MED20Q9H944 212 aa18.65■□□□□ 0.58
DDX55-205ENST00000538744 C12orf10Q9HB07 376 aa18.65■□□□□ 0.58
DDX55-205ENST00000538744 ISYNA1Q9NPH2 558 aa18.65■□□□□ 0.58
DDX55-205ENST00000538744 NDUFB11Q9NX14 153 aa18.65■□□□□ 0.58
DDX55-205ENST00000538744 C19orf25Q9UFG5 118 aaPredicted RBP18.65■□□□□ 0.58
DDX55-205ENST00000538744 EXPH5Q8NEV8 1989 aa18.64■□□□□ 0.57
DDX55-205ENST00000538744 IGHA1P01876 353 aa18.64■□□□□ 0.57
DDX55-205ENST00000538744 GP1BAP07359 652 aa18.64■□□□□ 0.57
DDX55-205ENST00000538744 LIMS3P0CW19 117 aa18.64■□□□□ 0.57
DDX55-205ENST00000538744 LIMS4P0CW20 117 aa18.64■□□□□ 0.57
DDX55-205ENST00000538744 NOS3P29474 1203 aa18.64■□□□□ 0.57
DDX55-205ENST00000538744 ZNF829Q3KNS6 432 aaPredicted RBP18.64■□□□□ 0.57
DDX55-205ENST00000538744 LCN10Q6JVE6 187 aa18.64■□□□□ 0.57
DDX55-205ENST00000538744 CPEB2Q7Z5Q1 589 aaKnown RBP18.64■□□□□ 0.57
DDX55-205ENST00000538744 NUBPLQ8TB37 319 aa18.64■□□□□ 0.57
DDX55-205ENST00000538744 CENPOQ9BU64 300 aa18.64■□□□□ 0.57
DDX55-205ENST00000538744 JAM3Q9BX67 310 aa18.64■□□□□ 0.57
DDX55-205ENST00000538744 RXFP3Q9NSD7 469 aa18.64■□□□□ 0.57
DDX55-205ENST00000538744 TNFRSF10DQ9UBN6 386 aa18.64■□□□□ 0.57
DDX55-205ENST00000538744 SEC14L4Q9UDX3 406 aa18.64■□□□□ 0.57
DDX55-205ENST00000538744 KHNYNO15037 678 aaKnown RBP18.63■□□□□ 0.57
DDX55-205ENST00000538744 FADS1O60427 444 aa18.63■□□□□ 0.57
DDX55-205ENST00000538744 PAICSP22234 425 aaKnown RBP18.63■□□□□ 0.57
DDX55-205ENST00000538744 MST1P26927 711 aa18.63■□□□□ 0.57
DDX55-205ENST00000538744 EVI2BP34910 448 aa18.63■□□□□ 0.57
DDX55-205ENST00000538744 BMXP51813 675 aa18.63■□□□□ 0.57
DDX55-205ENST00000538744 ITGADQ13349 1161 aa18.63■□□□□ 0.57
DDX55-205ENST00000538744 MRPL14Q6P1L8 145 aaKnown RBP18.63■□□□□ 0.57
DDX55-205ENST00000538744 CROCCP3Q8IVE0 287 aa18.63■□□□□ 0.57
DDX55-205ENST00000538744 LRRC17Q8N6Y2 441 aa18.63■□□□□ 0.57
DDX55-205ENST00000538744 SLC37A3Q8NCC5 494 aa18.63■□□□□ 0.57
DDX55-205ENST00000538744 BORCS5Q969J3 196 aa18.63■□□□□ 0.57
DDX55-205ENST00000538744 LRFN5Q96NI6 719 aa18.63■□□□□ 0.57
DDX55-205ENST00000538744 ERMAPQ96PL5 475 aaPredicted RBP18.63■□□□□ 0.57
DDX55-205ENST00000538744 WDR77Q9BQA1 342 aaPredicted RBP18.63■□□□□ 0.57
DDX55-205ENST00000538744 MESP1Q9BRJ9 268 aa18.63■□□□□ 0.57
DDX55-205ENST00000538744 PCDHGB2Q9Y5G2 931 aa18.63■□□□□ 0.57
DDX55-205ENST00000538744 NPFFR2Q9Y5X5 522 aa18.63■□□□□ 0.57
DDX55-205ENST00000538744 PMF1-BGLAPU3KQ54 211 aa18.63■□□□□ 0.57
DDX55-205ENST00000538744 SLC22A31A6NKX4 558 aa18.63■□□□□ 0.57
DDX55-205ENST00000538744 LRRN3E7EW58 273 aa18.63■□□□□ 0.57
DDX55-205ENST00000538744 CPEP16870 476 aa18.63■□□□□ 0.57
DDX55-205ENST00000538744 ACP1P24666 158 aa18.63■□□□□ 0.57
DDX55-205ENST00000538744 PSMA1P25786 263 aaKnown RBP18.63■□□□□ 0.57
DDX55-205ENST00000538744 RPS3AP61247 264 aaKnown RBP18.63■□□□□ 0.57
DDX55-205ENST00000538744 MC2RQ01718 297 aa18.63■□□□□ 0.57
DDX55-205ENST00000538744 EFR3AQ14156 821 aa18.63■□□□□ 0.57
DDX55-205ENST00000538744 ANGPT1Q15389 498 aa18.63■□□□□ 0.57
DDX55-205ENST00000538744 OR2G6Q5TZ20 316 aa18.63■□□□□ 0.57
DDX55-205ENST00000538744 FCRLBQ6BAA4 426 aa18.63■□□□□ 0.57
DDX55-205ENST00000538744 TCEAL6Q6IPX3 200 aa18.63■□□□□ 0.57
DDX55-205ENST00000538744 TMEM205Q6UW68 189 aa18.63■□□□□ 0.57
DDX55-205ENST00000538744 GDPGP1Q6ZNW5 385 aa18.63■□□□□ 0.57
DDX55-205ENST00000538744 OR5M3Q8NGP4 307 aa18.63■□□□□ 0.57
DDX55-205ENST00000538744 ATOH1Q92858 354 aaPredicted RBP18.63■□□□□ 0.57
DDX55-205ENST00000538744 TCEAL3Q969E4 200 aa18.63■□□□□ 0.57
DDX55-205ENST00000538744 HCAR1Q9BXC0 346 aa18.63■□□□□ 0.57
DDX55-205ENST00000538744 SLIRPQ9GZT3 109 aaKnown RBP18.63■□□□□ 0.57
DDX55-205ENST00000538744 ADAM19Q9H013 955 aa18.63■□□□□ 0.57
DDX55-205ENST00000538744 WDR54Q9H977 334 aa18.63■□□□□ 0.57
DDX55-205ENST00000538744 CHRNA9Q9UGM1 479 aa18.63■□□□□ 0.57
DDX55-205ENST00000538744 KLHL21Q9UJP4 597 aa18.63■□□□□ 0.57
DDX55-205ENST00000538744 NXT1Q9UKK6 140 aaKnown RBP18.63■□□□□ 0.57
DDX55-205ENST00000538744 TRBV11-1A0A0K0K1C0 115 aa18.62■□□□□ 0.57
DDX55-205ENST00000538744 SCO2O43819 266 aa18.62■□□□□ 0.57
DDX55-205ENST00000538744 GPX5O75715 221 aa18.62■□□□□ 0.57
DDX55-205ENST00000538744 TSPAN19P0C672 248 aa18.62■□□□□ 0.57
DDX55-205ENST00000538744 PGCP20142 388 aa18.62■□□□□ 0.57
DDX55-205ENST00000538744 ITPKBP27987 946 aa18.62■□□□□ 0.57
DDX55-205ENST00000538744 TACR3P29371 465 aa18.62■□□□□ 0.57
DDX55-205ENST00000538744 OPRL1P41146 370 aa18.62■□□□□ 0.57
DDX55-205ENST00000538744 RPS4XP62701 263 aaKnown RBP18.62■□□□□ 0.57
DDX55-205ENST00000538744 CRMP1Q14194 572 aa18.62■□□□□ 0.57
DDX55-205ENST00000538744 KLHL12Q53G59 568 aa18.62■□□□□ 0.57
DDX55-205ENST00000538744 SOWAHCQ53LP3 525 aaPredicted RBP18.62■□□□□ 0.57
DDX55-205ENST00000538744 ZNF362Q5T0B9 420 aaPredicted RBP18.62■□□□□ 0.57
DDX55-205ENST00000538744 DPY19L2P2Q6ZN68 376 aa18.62■□□□□ 0.57
DDX55-205ENST00000538744 LHFPL3Q86UP9 236 aa18.62■□□□□ 0.57
DDX55-205ENST00000538744 PHC2Q8IXK0 858 aa18.62■□□□□ 0.57
DDX55-205ENST00000538744 SIRT6Q8N6T7 355 aa18.62■□□□□ 0.57
DDX55-205ENST00000538744 AMER2Q8N7J2 671 aa18.62■□□□□ 0.57
DDX55-205ENST00000538744 OR51G2Q8NGK0 314 aa18.62■□□□□ 0.57
DDX55-205ENST00000538744 OR8K3Q8NH51 312 aa18.62■□□□□ 0.57
DDX55-205ENST00000538744 OR5W2Q8NH69 310 aa18.62■□□□□ 0.57
DDX55-205ENST00000538744 PTP4A1Q93096 173 aa18.62■□□□□ 0.57
DDX55-205ENST00000538744 LOXL4Q96JB6 756 aa18.62■□□□□ 0.57
DDX55-205ENST00000538744 RNF167Q9H6Y7 350 aa18.62■□□□□ 0.57
DDX55-205ENST00000538744 FBXO8Q9NRD0 319 aa18.62■□□□□ 0.57
DDX55-205ENST00000538744 GPN3Q9UHW5 284 aaPredicted RBP18.62■□□□□ 0.57
DDX55-205ENST00000538744 STUB1Q9UNE7 303 aa18.62■□□□□ 0.57
DDX55-205ENST00000538744 SPIN1Q9Y657 262 aaPredicted RBP18.62■□□□□ 0.57
DDX55-205ENST00000538744 MCIDASD6RGH6 385 aa18.61■□□□□ 0.57
DDX55-205ENST00000538744 GDF9O60383 454 aa18.61■□□□□ 0.57
DDX55-205ENST00000538744 RPL4P36578 427 aaKnown RBP18.61■□□□□ 0.57
DDX55-205ENST00000538744 PRPS1P60891 318 aa18.61■□□□□ 0.57
DDX55-205ENST00000538744 CBFBQ13951 182 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms