RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 KIAA0513O60268 411 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 SCGB2A1O75556 95 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 ZNF12P17014 697 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 CD53P19397 219 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 RAB3BP20337 219 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 SERPINA2P20848 420 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 TACR1P25103 407 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 ART1P52961 327 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 OR8B8Q15620 311 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 ZNF404Q494X3 552 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 SLC48A1Q6P1K1 146 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 AMDHD1Q96NU7 426 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 MGLLQ99685 303 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 SYNPO2LQ9H987 977 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 DCAF13Q9NV06 445 aaKnown RBP4.98□□□□□ -1.61
LRP6-203ENST00000538239 OTOL1A6NHN0 477 aaPredicted RBP4.98□□□□□ -1.61
LRP6-203ENST00000538239 H7C417 338 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 SLC1A7O00341 560 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 SERPINA5P05154 406 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 GCAP28676 217 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 VEZF1Q14119 521 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 SBSNQ6UWP8 590 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 ZNF704Q6ZNC4 412 aaPredicted RBP4.98□□□□□ -1.61
LRP6-203ENST00000538239 CSNK2A3Q8NEV1 391 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 IL17RDQ8NFM7 739 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 OR5H2Q8NGV7 314 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 OR11L1Q8NGX0 322 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 C12orf43Q96C57 262 aaKnown RBP4.98□□□□□ -1.61
LRP6-203ENST00000538239 TAAR9Q96RI9 348 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 CITED4Q96RK1 184 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 DHRS4Q9BTZ2 278 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 CXorf36Q9H7Y0 433 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 SLC6A20Q9NP91 592 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 WSB2Q9NYS7 404 aaPredicted RBP4.98□□□□□ -1.61
LRP6-203ENST00000538239 SLAMF8Q9P0V8 285 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 TMEM181Q9P2C4 612 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 SLC23A2Q9UGH3 650 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 POLR2AP24928 1970 aaKnown RBP4.98□□□□□ -1.61
LRP6-203ENST00000538239 SLC5A10A0PJK1 596 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 IDSB3KWA1 339 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 WNT11O96014 354 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 RETP07949 1114 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 ZNF44P15621 663 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 CAPZBP47756 277 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 BTG2P78543 158 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 COX20Q5RI15 118 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 TMEM71Q6P5X7 295 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 PPP1R35Q8TAP8 253 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 IL1F10Q8WWZ1 152 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 MED20Q9H944 212 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 C12orf4Q9NQ89 552 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 RDH8Q9NYR8 311 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 MKRN2OSH3BPM6 223 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 FBP2O00757 339 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 PCDH17O14917 1159 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 DSCR3O14972 297 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 B4GAT1O43505 415 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 PRKNO60260 465 aaPredicted RBP4.97□□□□□ -1.61
LRP6-203ENST00000538239 CBX7O95931 251 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 PDE7AQ13946 482 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 P2RY14Q15391 338 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 SLC36A2Q495M3 483 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 STT3BQ8TCJ2 826 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 SCGB1C1Q8TD33 95 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 TSLPQ969D9 159 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 SLC41A2Q96JW4 573 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 C4orf36Q96KX1 117 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 VRK1Q99986 396 aaPredicted RBP4.97□□□□□ -1.61
LRP6-203ENST00000538239 P2RY12Q9H244 342 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 B3GNT2Q9NY97 397 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 LRFN1Q9P244 771 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 PLXNB2O15031 1838 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 CCDC187A0A096LP49 1063 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 STOMP27105 288 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 AKR1C2P52895 323 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 ADARB1P78563 741 aaKnown RBP4.97□□□□□ -1.61
LRP6-203ENST00000538239 PPA1Q15181 289 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 GRK1Q15835 563 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 OR7E24Q6IFN5 339 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 TMEM92Q6UXU6 159 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 ZNF836Q6ZNA1 936 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 ZNF554Q86TJ5 538 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 GOT1L1Q8NHS2 421 aaPredicted RBP4.97□□□□□ -1.61
LRP6-203ENST00000538239 FBXO27Q8NI29 283 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 BAHD1Q8TBE0 780 aaPredicted RBP4.97□□□□□ -1.61
LRP6-203ENST00000538239 ACOT11Q8WXI4 607 aaPredicted RBP4.97□□□□□ -1.61
LRP6-203ENST00000538239 H1FXQ92522 213 aaKnown RBP4.97□□□□□ -1.61
LRP6-203ENST00000538239 ZNF285Q96NJ3 590 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 MNTQ99583 582 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 MICU1Q9BPX6 476 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 TREX2Q9BQ50 279 aaPredicted RBP4.97□□□□□ -1.61
LRP6-203ENST00000538239 PTTG2Q9NZH5 202 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 AK6Q9Y3D8 172 aaKnown RBP4.97□□□□□ -1.61
LRP6-203ENST00000538239 PCDHGA1Q9Y5H4 931 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 XIRP1Q702N8 1843 aaKnown RBP4.97□□□□□ -1.61
LRP6-203ENST00000538239 TRBV4-1A0A0J9YWV2 114 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 TARM1B6A8C7 271 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 TRAPPC2LH3BP13 241 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 PLPP1O14494 284 aa4.97□□□□□ -1.61
LRP6-203ENST00000538239 CEACAM5P06731 702 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms