RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 NSUN5P2Q63ZY6 315 aa11.73□□□□□ -0.53
CHFR-216ENST00000538235 HIST2H2BCQ6DN03 193 aa11.73□□□□□ -0.53
CHFR-216ENST00000538235 B3GNT6Q6ZMB0 384 aa11.73□□□□□ -0.53
CHFR-216ENST00000538235 KRT73Q86Y46 540 aa11.73□□□□□ -0.53
CHFR-216ENST00000538235 P3H2Q8IVL5 708 aa11.73□□□□□ -0.53
CHFR-216ENST00000538235 ADGRG4Q8IZF6 3080 aa11.73□□□□□ -0.53
CHFR-216ENST00000538235 OR2V1Q8NHB1 315 aa11.73□□□□□ -0.53
CHFR-216ENST00000538235 ZPLD1Q8TCW7 415 aa11.73□□□□□ -0.53
CHFR-216ENST00000538235 UCN2Q96RP3 112 aa11.73□□□□□ -0.53
CHFR-216ENST00000538235 ZNF607Q96SK3 696 aa11.73□□□□□ -0.53
CHFR-216ENST00000538235 PTDSS2Q9BVG9 487 aa11.73□□□□□ -0.53
CHFR-216ENST00000538235 TMED7Q9Y3B3 224 aa11.73□□□□□ -0.53
CHFR-216ENST00000538235 HECTD1Q9ULT8 2610 aa11.72□□□□□ -0.53
CHFR-216ENST00000538235 A0A0B4J2E0 115 aa11.72□□□□□ -0.53
CHFR-216ENST00000538235 A0A1B0GUH1 482 aa11.72□□□□□ -0.53
CHFR-216ENST00000538235 A0A1B0GX12 115 aa11.72□□□□□ -0.53
CHFR-216ENST00000538235 ERICH4A6NGS2 130 aa11.72□□□□□ -0.53
CHFR-216ENST00000538235 CD8B2A6NJW9 211 aa11.72□□□□□ -0.53
CHFR-216ENST00000538235 C19orf84I3L1E1 186 aa11.72□□□□□ -0.53
CHFR-216ENST00000538235 ARPC2O15144 300 aa11.72□□□□□ -0.53
CHFR-216ENST00000538235 SMAD9O15198 467 aaKnown RBP11.72□□□□□ -0.53
CHFR-216ENST00000538235 NPIPB7O75200 414 aa11.72□□□□□ -0.53
CHFR-216ENST00000538235 SERPINA1P01009 418 aa11.72□□□□□ -0.53
CHFR-216ENST00000538235 SEMG1P04279 462 aa11.72□□□□□ -0.53
CHFR-216ENST00000538235 EDNRAP25101 427 aa11.72□□□□□ -0.53
CHFR-216ENST00000538235 GRNP28799 593 aaKnown RBP11.72□□□□□ -0.53
CHFR-216ENST00000538235 EIF1P41567 113 aaKnown RBP11.72□□□□□ -0.53
CHFR-216ENST00000538235 SLC1A3P43003 542 aa11.72□□□□□ -0.53
CHFR-216ENST00000538235 AGFG1P52594 562 aaKnown RBP11.72□□□□□ -0.53
CHFR-216ENST00000538235 MS4A2Q01362 244 aa11.72□□□□□ -0.53
CHFR-216ENST00000538235 BNIP1Q12981 228 aa11.72□□□□□ -0.53
CHFR-216ENST00000538235 PON3Q15166 354 aa11.72□□□□□ -0.53
CHFR-216ENST00000538235 OR1Q1Q15612 314 aa11.72□□□□□ -0.53
CHFR-216ENST00000538235 ZNF239Q16600 458 aaKnown RBP11.72□□□□□ -0.53
CHFR-216ENST00000538235 IQCCQ4KMZ1 466 aa11.72□□□□□ -0.53
CHFR-216ENST00000538235 SYT14P1Q58G82 188 aa11.72□□□□□ -0.53
CHFR-216ENST00000538235 C3orf33Q6P1S2 294 aa11.72□□□□□ -0.53
CHFR-216ENST00000538235 ENPP6Q6UWR7 440 aa11.72□□□□□ -0.53
CHFR-216ENST00000538235 CBLL1Q75N03 491 aa11.72□□□□□ -0.53
CHFR-216ENST00000538235 ZNF550Q7Z398 422 aa11.72□□□□□ -0.53
CHFR-216ENST00000538235 CARM1Q86X55 608 aa11.72□□□□□ -0.53
CHFR-216ENST00000538235 SLC30A8Q8IWU4 369 aa11.72□□□□□ -0.53
CHFR-216ENST00000538235 GCNT2Q8N0V5 402 aa11.72□□□□□ -0.53
CHFR-216ENST00000538235 SSC4DQ8WTU2 575 aa11.72□□□□□ -0.53
CHFR-216ENST00000538235 ROBO4Q8WZ75 1007 aa11.72□□□□□ -0.53
CHFR-216ENST00000538235 SLC35B4Q969S0 331 aa11.72□□□□□ -0.53
CHFR-216ENST00000538235 HSH2DQ96JZ2 352 aa11.72□□□□□ -0.53
CHFR-216ENST00000538235 PRSS27Q9BQR3 290 aa11.72□□□□□ -0.53
CHFR-216ENST00000538235 SPATA5L1Q9BVQ7 753 aa11.72□□□□□ -0.53
CHFR-216ENST00000538235 SEC14L4Q9UDX3 406 aa11.72□□□□□ -0.53
CHFR-216ENST00000538235 TESQ9UGI8 421 aaKnown RBP11.72□□□□□ -0.53
CHFR-216ENST00000538235 CHRNA9Q9UGM1 479 aa11.72□□□□□ -0.53
CHFR-216ENST00000538235 PRR14LQ5THK1 2151 aa11.71□□□□□ -0.53
CHFR-216ENST00000538235 A1L4Q6 167 aa11.71□□□□□ -0.53
CHFR-216ENST00000538235 CPSF4LA6NMK7 179 aaKnown RBP11.71□□□□□ -0.53
CHFR-216ENST00000538235 AHRRA9YTQ3 701 aa11.71□□□□□ -0.53
CHFR-216ENST00000538235 FAM47E-STBD1D6RA91 191 aa11.71□□□□□ -0.53
CHFR-216ENST00000538235 J3KTA2 159 aa11.71□□□□□ -0.53
CHFR-216ENST00000538235 FFAR1O14842 300 aa11.71□□□□□ -0.53
CHFR-216ENST00000538235 SERPINB7O75635 380 aa11.71□□□□□ -0.53
CHFR-216ENST00000538235 PRSS23O95084 383 aa11.71□□□□□ -0.53
CHFR-216ENST00000538235 ENPP1P22413 925 aa11.71□□□□□ -0.53
CHFR-216ENST00000538235 EIF1AXP47813 144 aaKnown RBP11.71□□□□□ -0.53
CHFR-216ENST00000538235 POLR2HP52434 150 aaKnown RBP11.71□□□□□ -0.53
CHFR-216ENST00000538235 CDH12P55289 794 aa11.71□□□□□ -0.53
CHFR-216ENST00000538235 MYBPHQ13203 477 aa11.71□□□□□ -0.53
CHFR-216ENST00000538235 ENTPD8Q5MY95 495 aa11.71□□□□□ -0.53
CHFR-216ENST00000538235 INTS11Q5TA45 600 aaKnown RBP11.71□□□□□ -0.53
CHFR-216ENST00000538235 WBP2NLQ6ICG8 309 aa11.71□□□□□ -0.53
CHFR-216ENST00000538235 ZNF440Q8IYI8 595 aa11.71□□□□□ -0.53
CHFR-216ENST00000538235 PM20D2Q8IYS1 436 aa11.71□□□□□ -0.53
CHFR-216ENST00000538235 LSMEM1Q8N8F7 131 aa11.71□□□□□ -0.53
CHFR-216ENST00000538235 OR5B2Q96R09 309 aa11.71□□□□□ -0.53
CHFR-216ENST00000538235 MCHR1Q99705 422 aa11.71□□□□□ -0.53
CHFR-216ENST00000538235 UCK2Q9BZX2 261 aa11.71□□□□□ -0.53
CHFR-216ENST00000538235 AMBRA1Q9C0C7 1298 aa11.71□□□□□ -0.53
CHFR-216ENST00000538235 MAN2C1Q9NTJ4 1040 aa11.71□□□□□ -0.53
CHFR-216ENST00000538235 CLEC4AQ9UMR7 237 aa11.71□□□□□ -0.53
CHFR-216ENST00000538235 ZNF232Q9UNY5 417 aa11.71□□□□□ -0.53
CHFR-216ENST00000538235 SH3GLB1Q9Y371 365 aa11.71□□□□□ -0.53
CHFR-216ENST00000538235 V9GYQ6 96 aa11.71□□□□□ -0.53
CHFR-216ENST00000538235 TCRBV5S2A0A599 114 aa11.7□□□□□ -0.54
CHFR-216ENST00000538235 NKX2-6A6NCS4 301 aa11.7□□□□□ -0.54
CHFR-216ENST00000538235 FTCDNL1E5RQL4 147 aa11.7□□□□□ -0.54
CHFR-216ENST00000538235 LRRN3E7EW58 273 aa11.7□□□□□ -0.54
CHFR-216ENST00000538235 LINC01387J3KSC0 135 aa11.7□□□□□ -0.54
CHFR-216ENST00000538235 TNFSF13O75888 250 aa11.7□□□□□ -0.54
CHFR-216ENST00000538235 C8BP07358 591 aa11.7□□□□□ -0.54
CHFR-216ENST00000538235 GABRA1P14867 456 aa11.7□□□□□ -0.54
CHFR-216ENST00000538235 APOBEC1P41238 236 aaKnown RBP11.7□□□□□ -0.54
CHFR-216ENST00000538235 P2RY4P51582 365 aa11.7□□□□□ -0.54
CHFR-216ENST00000538235 NCALDP61601 193 aa11.7□□□□□ -0.54
CHFR-216ENST00000538235 MXRA7P84157 204 aa11.7□□□□□ -0.54
CHFR-216ENST00000538235 LTBQ06643 244 aa11.7□□□□□ -0.54
CHFR-216ENST00000538235 TFF3Q07654 80 aa11.7□□□□□ -0.54
CHFR-216ENST00000538235 SAMD4BQ5PRF9 694 aaKnown RBP11.7□□□□□ -0.54
CHFR-216ENST00000538235 RIPPLY2Q5TAB7 128 aa11.7□□□□□ -0.54
CHFR-216ENST00000538235 HBMQ6B0K9 141 aa11.7□□□□□ -0.54
CHFR-216ENST00000538235 GLYATQ6IB77 296 aa11.7□□□□□ -0.54
CHFR-216ENST00000538235 VWA1Q6PCB0 445 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms