RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 SLC25A46Q96AG3 418 aa9.89□□□□□ -0.83
CLIP1-210ENST00000538120 DIRAS2Q96HU8 199 aa9.89□□□□□ -0.83
CLIP1-210ENST00000538120 WDFY2Q96P53 400 aa9.89□□□□□ -0.83
CLIP1-210ENST00000538120 CUTCQ9NTM9 273 aa9.89□□□□□ -0.83
CLIP1-210ENST00000538120 SEMA5BQ9P283 1151 aa9.89□□□□□ -0.83
CLIP1-210ENST00000538120 SEC14L4Q9UDX3 406 aa9.89□□□□□ -0.83
CLIP1-210ENST00000538120 RPL36Q9Y3U8 105 aaKnown RBP9.89□□□□□ -0.83
CLIP1-210ENST00000538120 CSNK1G3Q9Y6M4 447 aa9.89□□□□□ -0.83
CLIP1-210ENST00000538120 CEP192Q8TEP8 1941 aa9.89□□□□□ -0.83
CLIP1-210ENST00000538120 SPAG17Q6Q759 2223 aa9.89□□□□□ -0.83
CLIP1-210ENST00000538120 NPIPB9F8W1W9 429 aa9.89□□□□□ -0.83
CLIP1-210ENST00000538120 FMO6PO60774 539 aa9.89□□□□□ -0.83
CLIP1-210ENST00000538120 CPNE3O75131 537 aaKnown RBP9.89□□□□□ -0.83
CLIP1-210ENST00000538120 CT45A8P0DMV1 189 aa9.89□□□□□ -0.83
CLIP1-210ENST00000538120 CT45A9P0DMV2 189 aa9.89□□□□□ -0.83
CLIP1-210ENST00000538120 MYL9P24844 172 aa9.89□□□□□ -0.83
CLIP1-210ENST00000538120 ETV5P41161 510 aa9.89□□□□□ -0.83
CLIP1-210ENST00000538120 ETV1P50549 477 aa9.89□□□□□ -0.83
CLIP1-210ENST00000538120 SNAPC1Q16533 368 aa9.89□□□□□ -0.83
CLIP1-210ENST00000538120 AMZ1Q400G9 498 aa9.89□□□□□ -0.83
CLIP1-210ENST00000538120 CT45A2Q5DJT8 189 aa9.89□□□□□ -0.83
CLIP1-210ENST00000538120 SLC27A4Q6P1M0 643 aa9.89□□□□□ -0.83
CLIP1-210ENST00000538120 RRM2BQ7LG56 351 aa9.89□□□□□ -0.83
CLIP1-210ENST00000538120 UBALD2Q8IYN6 164 aa9.89□□□□□ -0.83
CLIP1-210ENST00000538120 LSMEM1Q8N8F7 131 aa9.89□□□□□ -0.83
CLIP1-210ENST00000538120 GALNT6Q8NCL4 622 aa9.89□□□□□ -0.83
CLIP1-210ENST00000538120 OR1L3Q8NH93 324 aa9.89□□□□□ -0.83
CLIP1-210ENST00000538120 TEX47Q8TBZ9 253 aa9.89□□□□□ -0.83
CLIP1-210ENST00000538120 AHCYL2Q96HN2 611 aaKnown RBP9.89□□□□□ -0.83
CLIP1-210ENST00000538120 LRR1Q96L50 414 aa9.89□□□□□ -0.83
CLIP1-210ENST00000538120 SLC22A4Q9H015 551 aa9.89□□□□□ -0.83
CLIP1-210ENST00000538120 MALT1Q9UDY8 824 aa9.89□□□□□ -0.83
CLIP1-210ENST00000538120 TESQ9UGI8 421 aaKnown RBP9.89□□□□□ -0.83
CLIP1-210ENST00000538120 SSR3Q9UNL2 185 aa9.89□□□□□ -0.83
CLIP1-210ENST00000538120 ERVK-19Q9WJR5 959 aa9.89□□□□□ -0.83
CLIP1-210ENST00000538120 SPTBP11277 2137 aa9.88□□□□□ -0.83
CLIP1-210ENST00000538120 A0A0X1KG70 313 aa9.88□□□□□ -0.83
CLIP1-210ENST00000538120 IQCMA0A1B0GVH7 501 aa9.88□□□□□ -0.83
CLIP1-210ENST00000538120 TMEM150CB9EJG8 249 aa9.88□□□□□ -0.83
CLIP1-210ENST00000538120 ALG1L2C9J202 215 aa9.88□□□□□ -0.83
CLIP1-210ENST00000538120 OR2B3O76000 313 aa9.88□□□□□ -0.83
CLIP1-210ENST00000538120 SOX30O94993 753 aa9.88□□□□□ -0.83
CLIP1-210ENST00000538120 FOLR1P15328 257 aa9.88□□□□□ -0.83
CLIP1-210ENST00000538120 GLB1P16278 677 aa9.88□□□□□ -0.83
CLIP1-210ENST00000538120 SDC2P34741 201 aa9.88□□□□□ -0.83
CLIP1-210ENST00000538120 RPS5P46782 204 aaKnown RBP9.88□□□□□ -0.83
CLIP1-210ENST00000538120 OR1D4P47884 311 aa9.88□□□□□ -0.83
CLIP1-210ENST00000538120 RFX3P48380 749 aa9.88□□□□□ -0.83
CLIP1-210ENST00000538120 EFNA3P52797 238 aa9.88□□□□□ -0.83
CLIP1-210ENST00000538120 HSD11B2P80365 405 aa9.88□□□□□ -0.83
CLIP1-210ENST00000538120 ASAH1Q13510 395 aa9.88□□□□□ -0.83
CLIP1-210ENST00000538120 PYDC2Q56P42 97 aa9.88□□□□□ -0.83
CLIP1-210ENST00000538120 CLEC12AQ5QGZ9 265 aa9.88□□□□□ -0.83
CLIP1-210ENST00000538120 SLC35F1Q5T1Q4 408 aa9.88□□□□□ -0.83
CLIP1-210ENST00000538120 OR2G6Q5TZ20 316 aa9.88□□□□□ -0.83
CLIP1-210ENST00000538120 ZNF620Q6ZNG0 422 aa9.88□□□□□ -0.83
CLIP1-210ENST00000538120 TTLL10Q6ZVT0 673 aa9.88□□□□□ -0.83
CLIP1-210ENST00000538120 GRAMD2AQ8IUY3 354 aa9.88□□□□□ -0.83
CLIP1-210ENST00000538120 RDH10Q8IZV5 341 aa9.88□□□□□ -0.83
CLIP1-210ENST00000538120 D2HGDHQ8N465 521 aa9.88□□□□□ -0.83
CLIP1-210ENST00000538120 NLGN4YQ8NFZ3 816 aaPredicted RBP9.88□□□□□ -0.83
CLIP1-210ENST00000538120 PFN4Q8NHR9 129 aa9.88□□□□□ -0.83
CLIP1-210ENST00000538120 C16orf52Q8NHV5 167 aa9.88□□□□□ -0.83
CLIP1-210ENST00000538120 TMEM163Q8TC26 289 aa9.88□□□□□ -0.83
CLIP1-210ENST00000538120 MND1Q9BWT6 205 aa9.88□□□□□ -0.83
CLIP1-210ENST00000538120 OR10A5Q9H207 317 aa9.88□□□□□ -0.83
CLIP1-210ENST00000538120 RPRD1BQ9NQG5 326 aaKnown RBP9.88□□□□□ -0.83
CLIP1-210ENST00000538120 FLRT3Q9NZU0 649 aa9.88□□□□□ -0.83
CLIP1-210ENST00000538120 CACNA1IQ9P0X4 2223 aa9.88□□□□□ -0.83
CLIP1-210ENST00000538120 OR6C70A6NIJ9 312 aa9.88□□□□□ -0.83
CLIP1-210ENST00000538120 SMLR1H3BR10 107 aa9.88□□□□□ -0.83
CLIP1-210ENST00000538120 MYL12BO14950 172 aa9.88□□□□□ -0.83
CLIP1-210ENST00000538120 PRAMEF2O60811 474 aa9.88□□□□□ -0.83
CLIP1-210ENST00000538120 YES1P07947 543 aa9.88□□□□□ -0.83
CLIP1-210ENST00000538120 MAKP20794 623 aa9.88□□□□□ -0.83
CLIP1-210ENST00000538120 APEX1P27695 318 aaKnown RBP9.88□□□□□ -0.83
CLIP1-210ENST00000538120 ACAA2P42765 397 aaKnown RBP9.88□□□□□ -0.83
CLIP1-210ENST00000538120 RGS19P49795 217 aa9.88□□□□□ -0.83
CLIP1-210ENST00000538120 PGDP52209 483 aa9.88□□□□□ -0.83
CLIP1-210ENST00000538120 FXYD6P3P58550 94 aa9.88□□□□□ -0.83
CLIP1-210ENST00000538120 EFR3AQ14156 821 aa9.88□□□□□ -0.83
CLIP1-210ENST00000538120 ZNHIT3Q15649 155 aaPredicted RBP9.88□□□□□ -0.83
CLIP1-210ENST00000538120 ZNF141Q15928 474 aa9.88□□□□□ -0.83
CLIP1-210ENST00000538120 RNLSQ5VYX0 342 aa9.88□□□□□ -0.83
CLIP1-210ENST00000538120 MED25Q71SY5 747 aa9.88□□□□□ -0.83
CLIP1-210ENST00000538120 CARFQ8N187 725 aa9.88□□□□□ -0.83
CLIP1-210ENST00000538120 FAM181AQ8N9Y4 354 aa9.88□□□□□ -0.83
CLIP1-210ENST00000538120 ATP6V1C2Q8NEY4 427 aa9.88□□□□□ -0.83
CLIP1-210ENST00000538120 PTPMT1Q8WUK0 201 aaPredicted RBP9.88□□□□□ -0.83
CLIP1-210ENST00000538120 TM9SF4Q92544 642 aa9.88□□□□□ -0.83
CLIP1-210ENST00000538120 SLC41A2Q96JW4 573 aa9.88□□□□□ -0.83
CLIP1-210ENST00000538120 ELF4Q99607 663 aaPredicted RBP9.88□□□□□ -0.83
CLIP1-210ENST00000538120 TM9SF2Q99805 663 aa9.88□□□□□ -0.83
CLIP1-210ENST00000538120 RNF121Q9H920 327 aa9.88□□□□□ -0.83
CLIP1-210ENST00000538120 C20orf141Q9NUB4 165 aa9.88□□□□□ -0.83
CLIP1-210ENST00000538120 DNAJB12Q9NXW2 375 aaKnown RBP9.88□□□□□ -0.83
CLIP1-210ENST00000538120 NLGN3Q9NZ94 848 aa9.88□□□□□ -0.83
CLIP1-210ENST00000538120 GPR52Q9Y2T5 361 aa9.88□□□□□ -0.83
CLIP1-210ENST00000538120 LAMA1P25391 3075 aa9.87□□□□□ -0.83
CLIP1-210ENST00000538120 TSPAN19P0C672 248 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms