RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 CALHM3Q86XJ0 350 aa7.48□□□□□ -1.21
SPARC-208ENST00000538026 TUSC5Q8IXB3 177 aa7.48□□□□□ -1.21
SPARC-208ENST00000538026 CMIPQ8IY22 773 aa7.48□□□□□ -1.21
SPARC-208ENST00000538026 ARFGAP2Q8N6H7 521 aa7.48□□□□□ -1.21
SPARC-208ENST00000538026 TSPEARQ8WU66 669 aa7.48□□□□□ -1.21
SPARC-208ENST00000538026 PMM1Q92871 262 aa7.48□□□□□ -1.21
SPARC-208ENST00000538026 GMPPAQ96IJ6 420 aaPredicted RBP7.48□□□□□ -1.21
SPARC-208ENST00000538026 WFIKKN1Q96NZ8 548 aa7.48□□□□□ -1.21
SPARC-208ENST00000538026 OR5B2Q96R09 309 aa7.48□□□□□ -1.21
SPARC-208ENST00000538026 CGREF1Q99674 301 aa7.48□□□□□ -1.21
SPARC-208ENST00000538026 PSD2Q9BQI7 771 aa7.48□□□□□ -1.21
SPARC-208ENST00000538026 SIKE1Q9BRV8 207 aa7.48□□□□□ -1.21
SPARC-208ENST00000538026 SLC39A3Q9BRY0 314 aa7.48□□□□□ -1.21
SPARC-208ENST00000538026 PIGMQ9H3S5 423 aa7.48□□□□□ -1.21
SPARC-208ENST00000538026 TMEM38AQ9H6F2 299 aa7.48□□□□□ -1.21
SPARC-208ENST00000538026 KAT8Q9H7Z6 458 aaKnown RBP7.48□□□□□ -1.21
SPARC-208ENST00000538026 MED4Q9NPJ6 270 aa7.48□□□□□ -1.21
SPARC-208ENST00000538026 NDUFAF1Q9Y375 327 aa7.48□□□□□ -1.21
SPARC-208ENST00000538026 RAI1Q7Z5J4 1906 aaPredicted RBP7.48□□□□□ -1.21
SPARC-208ENST00000538026 TLN2Q9Y4G6 2542 aa7.47□□□□□ -1.21
SPARC-208ENST00000538026 TMED7-TICAM2A0A0A6YYA0 188 aa7.47□□□□□ -1.21
SPARC-208ENST00000538026 CFAP73A6NFT4 308 aa7.47□□□□□ -1.21
SPARC-208ENST00000538026 A6NNC1 897 aa7.47□□□□□ -1.21
SPARC-208ENST00000538026 ZNF716A6NP11 495 aa7.47□□□□□ -1.21
SPARC-208ENST00000538026 DEFB108AA8MXU0 73 aa7.47□□□□□ -1.21
SPARC-208ENST00000538026 CYTIPO60759 359 aa7.47□□□□□ -1.21
SPARC-208ENST00000538026 NPIPB7O75200 414 aa7.47□□□□□ -1.21
SPARC-208ENST00000538026 SMNDC1O75940 238 aaKnown RBP eCLIP7.47□□□□□ -1.21
SPARC-208ENST00000538026 MFN2O95140 757 aa7.47□□□□□ -1.21
SPARC-208ENST00000538026 FESP07332 822 aa7.47□□□□□ -1.21
SPARC-208ENST00000538026 PABPC4LP0CB38 370 aaKnown RBP7.47□□□□□ -1.21
SPARC-208ENST00000538026 EPXP11678 715 aa7.47□□□□□ -1.21
SPARC-208ENST00000538026 ETS2P15036 469 aa7.47□□□□□ -1.21
SPARC-208ENST00000538026 ME2P23368 584 aa7.47□□□□□ -1.21
SPARC-208ENST00000538026 UGT2B10P36537 528 aa7.47□□□□□ -1.21
SPARC-208ENST00000538026 CD79BP40259 229 aa7.47□□□□□ -1.21
SPARC-208ENST00000538026 APOBEC1P41238 236 aaKnown RBP7.47□□□□□ -1.21
SPARC-208ENST00000538026 DIO1P49895 249 aa7.47□□□□□ -1.21
SPARC-208ENST00000538026 P2RY4P51582 365 aa7.47□□□□□ -1.21
SPARC-208ENST00000538026 ARFIP2P53365 341 aa7.47□□□□□ -1.21
SPARC-208ENST00000538026 SEC24CP53992 1094 aa7.47□□□□□ -1.21
SPARC-208ENST00000538026 CRISP3P54108 245 aa7.47□□□□□ -1.21
SPARC-208ENST00000538026 HPCAP84074 193 aa7.47□□□□□ -1.21
SPARC-208ENST00000538026 EGR4Q05215 589 aa7.47□□□□□ -1.21
SPARC-208ENST00000538026 DMTNQ08495 405 aa7.47□□□□□ -1.21
SPARC-208ENST00000538026 BNIP2Q12982 314 aa7.47□□□□□ -1.21
SPARC-208ENST00000538026 TESK1Q15569 626 aa7.47□□□□□ -1.21
SPARC-208ENST00000538026 ANKRD34AQ69YU3 496 aa7.47□□□□□ -1.21
SPARC-208ENST00000538026 C3orf33Q6P1S2 294 aa7.47□□□□□ -1.21
SPARC-208ENST00000538026 TFAP2EQ6VUC0 442 aa7.47□□□□□ -1.21
SPARC-208ENST00000538026 STAC2Q6ZMT1 411 aa7.47□□□□□ -1.21
SPARC-208ENST00000538026 FCRLAQ7L513 359 aa7.47□□□□□ -1.21
SPARC-208ENST00000538026 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.47□□□□□ -1.21
SPARC-208ENST00000538026 TREML1Q86YW5 311 aa7.47□□□□□ -1.21
SPARC-208ENST00000538026 LURAP1LQ8IV03 231 aa7.47□□□□□ -1.21
SPARC-208ENST00000538026 CCDC103Q8IW40 242 aa7.47□□□□□ -1.21
SPARC-208ENST00000538026 PEX5LQ8IYB4 626 aa7.47□□□□□ -1.21
SPARC-208ENST00000538026 GABRG1Q8N1C3 465 aa7.47□□□□□ -1.21
SPARC-208ENST00000538026 GPR32P1Q8NGA4 272 aa7.47□□□□□ -1.21
SPARC-208ENST00000538026 OR4D11Q8NGI4 311 aa7.47□□□□□ -1.21
SPARC-208ENST00000538026 OR6K3Q8NGY3 331 aa7.47□□□□□ -1.21
SPARC-208ENST00000538026 FAM222BQ8WU58 562 aa7.47□□□□□ -1.21
SPARC-208ENST00000538026 TMEM234Q8WY98 164 aa7.47□□□□□ -1.21
SPARC-208ENST00000538026 C3orf49Q96BT1 292 aa7.47□□□□□ -1.21
SPARC-208ENST00000538026 ZNF300Q96RE9 604 aaPredicted RBP7.47□□□□□ -1.21
SPARC-208ENST00000538026 ZNF559Q9BR84 538 aa7.47□□□□□ -1.21
SPARC-208ENST00000538026 GPATCH1Q9BRR8 931 aaKnown RBP7.47□□□□□ -1.21
SPARC-208ENST00000538026 SPATA9Q9BWV2 254 aa7.47□□□□□ -1.21
SPARC-208ENST00000538026 ACBD3Q9H3P7 528 aa7.47□□□□□ -1.21
SPARC-208ENST00000538026 BCO1Q9HAY6 547 aa7.47□□□□□ -1.21
SPARC-208ENST00000538026 RASSF1Q9NS23 344 aa7.47□□□□□ -1.21
SPARC-208ENST00000538026 ARMCX1Q9P291 453 aa7.47□□□□□ -1.21
SPARC-208ENST00000538026 KLHL13Q9P2N7 655 aa7.47□□□□□ -1.21
SPARC-208ENST00000538026 CHRNA9Q9UGM1 479 aa7.47□□□□□ -1.21
SPARC-208ENST00000538026 LEF1Q9UJU2 399 aaPredicted RBP7.47□□□□□ -1.21
SPARC-208ENST00000538026 FOXD3Q9UJU5 478 aaPredicted RBP7.47□□□□□ -1.21
SPARC-208ENST00000538026 TRIM33Q9UPN9 1127 aa7.47□□□□□ -1.21
SPARC-208ENST00000538026 TMED7Q9Y3B3 224 aa7.47□□□□□ -1.21
SPARC-208ENST00000538026 TESMINQ9Y4I5 508 aa7.47□□□□□ -1.21
SPARC-208ENST00000538026 IGKV1D-42A0A075B6H8 117 aa7.46□□□□□ -1.22
SPARC-208ENST00000538026 IGKV3D-15A0A087WSY6 115 aa7.46□□□□□ -1.22
SPARC-208ENST00000538026 LOC100653049A0A140TA62 436 aa7.46□□□□□ -1.22
SPARC-208ENST00000538026 TUBAL3A6NHL2 446 aa7.46□□□□□ -1.22
SPARC-208ENST00000538026 KRT34O76011 436 aa7.46□□□□□ -1.22
SPARC-208ENST00000538026 LYPD3O95274 346 aa7.46□□□□□ -1.22
SPARC-208ENST00000538026 SYNGR4O95473 234 aa7.46□□□□□ -1.22
SPARC-208ENST00000538026 HRGP04196 525 aa7.46□□□□□ -1.22
SPARC-208ENST00000538026 THY1P04216 161 aa7.46□□□□□ -1.22
SPARC-208ENST00000538026 DRD4P21917 467 aa7.46□□□□□ -1.22
SPARC-208ENST00000538026 AQP1P29972 269 aa7.46□□□□□ -1.22
SPARC-208ENST00000538026 CPOXP36551 454 aa7.46□□□□□ -1.22
SPARC-208ENST00000538026 ANXA11P50995 505 aaKnown RBP7.46□□□□□ -1.22
SPARC-208ENST00000538026 POLR2HP52434 150 aaKnown RBP7.46□□□□□ -1.22
SPARC-208ENST00000538026 FOXG1P55316 489 aaPredicted RBP7.46□□□□□ -1.22
SPARC-208ENST00000538026 SCARB2Q14108 478 aa7.46□□□□□ -1.22
SPARC-208ENST00000538026 TSC22D1Q15714 1073 aa7.46□□□□□ -1.22
SPARC-208ENST00000538026 NPTX1Q15818 432 aa7.46□□□□□ -1.22
SPARC-208ENST00000538026 DUSP7Q16829 419 aa7.46□□□□□ -1.22
SPARC-208ENST00000538026 LIN52Q52LA3 116 aa7.46□□□□□ -1.22
SPARC-208ENST00000538026 RABL3Q5HYI8 236 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms