RNA–Protein interactions for RNA: ENST00000537888.1

PEX11B-203, Transcript of peroxisomal biogenesis factor 11 beta, humanhuman

TSL 2 BASIC

Gene PEX11B, Length 1,632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX11B-203ENST00000537888 TMEM80Q96HE8 168 aa11.78□□□□□ -0.52
PEX11B-203ENST00000537888 FAM46AQ96IP4 442 aaKnown RBP11.78□□□□□ -0.52
PEX11B-203ENST00000537888 FER1L6-AS2Q96M78 137 aa11.78□□□□□ -0.52
PEX11B-203ENST00000537888 HS6ST2Q96MM7 605 aa11.78□□□□□ -0.52
PEX11B-203ENST00000537888 SLC38A2Q96QD8 506 aa11.78□□□□□ -0.52
PEX11B-203ENST00000537888 SMAD5Q99717 465 aaKnown RBP11.78□□□□□ -0.52
PEX11B-203ENST00000537888 TSSK6Q9BXA6 273 aa11.78□□□□□ -0.52
PEX11B-203ENST00000537888 TGIF2Q9GZN2 237 aa11.78□□□□□ -0.52
PEX11B-203ENST00000537888 OR10A5Q9H207 317 aa11.78□□□□□ -0.52
PEX11B-203ENST00000537888 EGLN3Q9H6Z9 239 aa11.78□□□□□ -0.52
PEX11B-203ENST00000537888 PLGRKTQ9HBL7 147 aa11.78□□□□□ -0.52
PEX11B-203ENST00000537888 DNAJC27Q9NZQ0 273 aa11.78□□□□□ -0.52
PEX11B-203ENST00000537888 TMEM5Q9Y2B1 443 aa11.78□□□□□ -0.52
PEX11B-203ENST00000537888 PCDHGB7Q9Y5F8 929 aa11.78□□□□□ -0.52
PEX11B-203ENST00000537888 CDH10Q9Y6N8 788 aa11.78□□□□□ -0.52
PEX11B-203ENST00000537888 TNRC6AQ8NDV7 1962 aaKnown RBP11.78□□□□□ -0.52
PEX11B-203ENST00000537888 COL12A1Q99715 3063 aa11.77□□□□□ -0.52
PEX11B-203ENST00000537888 IGKV3D-11A0A0A0MRZ8 115 aa11.77□□□□□ -0.53
PEX11B-203ENST00000537888 SNTNA6NMZ2 147 aa11.77□□□□□ -0.53
PEX11B-203ENST00000537888 PYCARD-AS1I3L0S3 204 aa11.77□□□□□ -0.53
PEX11B-203ENST00000537888 HRKO00198 91 aa11.77□□□□□ -0.53
PEX11B-203ENST00000537888 TLX2O43763 284 aaPredicted RBP11.77□□□□□ -0.53
PEX11B-203ENST00000537888 IGKV1D-16P01601 117 aa11.77□□□□□ -0.53
PEX11B-203ENST00000537888 IGHEP01854 428 aa11.77□□□□□ -0.53
PEX11B-203ENST00000537888 CT45A8P0DMV1 189 aa11.77□□□□□ -0.53
PEX11B-203ENST00000537888 CT45A9P0DMV2 189 aa11.77□□□□□ -0.53
PEX11B-203ENST00000537888 MAOAP21397 527 aa11.77□□□□□ -0.53
PEX11B-203ENST00000537888 PGDP52209 483 aa11.77□□□□□ -0.53
PEX11B-203ENST00000537888 ATP12AP54707 1039 aa11.77□□□□□ -0.53
PEX11B-203ENST00000537888 TLE1Q04724 770 aa11.77□□□□□ -0.53
PEX11B-203ENST00000537888 PRKCDQ05655 676 aa11.77□□□□□ -0.53
PEX11B-203ENST00000537888 FGFBP1Q14512 234 aa11.77□□□□□ -0.53
PEX11B-203ENST00000537888 SNAPC1Q16533 368 aa11.77□□□□□ -0.53
PEX11B-203ENST00000537888 CT45A2Q5DJT8 189 aa11.77□□□□□ -0.53
PEX11B-203ENST00000537888 LAPTM4BQ86VI4 370 aa11.77□□□□□ -0.53
PEX11B-203ENST00000537888 CROCCP3Q8IVE0 287 aa11.77□□□□□ -0.53
PEX11B-203ENST00000537888 LSMEM1Q8N8F7 131 aa11.77□□□□□ -0.53
PEX11B-203ENST00000537888 OR11G2Q8NGC1 345 aa11.77□□□□□ -0.53
PEX11B-203ENST00000537888 C16orf52Q8NHV5 167 aa11.77□□□□□ -0.53
PEX11B-203ENST00000537888 BRIX1Q8TDN6 353 aaKnown RBP11.77□□□□□ -0.53
PEX11B-203ENST00000537888 TMEM239Q8WW34 195 aa11.77□□□□□ -0.53
PEX11B-203ENST00000537888 ZNF582Q96NG8 517 aaPredicted RBP11.77□□□□□ -0.53
PEX11B-203ENST00000537888 SH3GL3Q99963 347 aa11.77□□□□□ -0.53
PEX11B-203ENST00000537888 CRB3Q9BUF7 120 aa11.77□□□□□ -0.53
PEX11B-203ENST00000537888 TEX12Q9BXU0 123 aa11.77□□□□□ -0.53
PEX11B-203ENST00000537888 TRIM2Q9C040 744 aa11.77□□□□□ -0.53
PEX11B-203ENST00000537888 DSN1Q9H410 356 aa11.77□□□□□ -0.53
PEX11B-203ENST00000537888 TMEM27Q9HBJ8 222 aa11.77□□□□□ -0.53
PEX11B-203ENST00000537888 CNIH4Q9P003 139 aa11.77□□□□□ -0.53
PEX11B-203ENST00000537888 FBXL4Q9UKA2 621 aa11.77□□□□□ -0.53
PEX11B-203ENST00000537888 ERVK-19Q9WJR5 959 aa11.77□□□□□ -0.53
PEX11B-203ENST00000537888 LSM2Q9Y333 95 aaKnown RBP11.77□□□□□ -0.53
PEX11B-203ENST00000537888 NPIPA5A0A0B4J1W7 369 aa11.76□□□□□ -0.53
PEX11B-203ENST00000537888 SYNDIG1LA6NDD5 238 aa11.76□□□□□ -0.53
PEX11B-203ENST00000537888 KDM4EB2RXH2 506 aaPredicted RBP11.76□□□□□ -0.53
PEX11B-203ENST00000537888 NPIPA7E9PJI5 369 aa11.76□□□□□ -0.53
PEX11B-203ENST00000537888 PRODHO43272 600 aa11.76□□□□□ -0.53
PEX11B-203ENST00000537888 CDC123O75794 336 aaPredicted RBP11.76□□□□□ -0.53
PEX11B-203ENST00000537888 HMGN1P05114 100 aa11.76□□□□□ -0.53
PEX11B-203ENST00000537888 ADRA2AP08913 450 aa11.76□□□□□ -0.53
PEX11B-203ENST00000537888 GKN3PP0CG01 181 aa11.76□□□□□ -0.53
PEX11B-203ENST00000537888 NPIPA8P0DM63 369 aa11.76□□□□□ -0.53
PEX11B-203ENST00000537888 RBM34P42696 430 aaKnown RBP11.76□□□□□ -0.53
PEX11B-203ENST00000537888 ACAA2P42765 397 aaKnown RBP11.76□□□□□ -0.53
PEX11B-203ENST00000537888 CTBP2P56545 445 aa11.76□□□□□ -0.53
PEX11B-203ENST00000537888 OCA2Q04671 838 aa11.76□□□□□ -0.53
PEX11B-203ENST00000537888 PDZK1Q5T2W1 519 aa11.76□□□□□ -0.53
PEX11B-203ENST00000537888 TMPRSS11FQ6ZWK6 438 aa11.76□□□□□ -0.53
PEX11B-203ENST00000537888 ZNF550Q7Z398 422 aa11.76□□□□□ -0.53
PEX11B-203ENST00000537888 CYP4Z2PQ8N1L4 340 aa11.76□□□□□ -0.53
PEX11B-203ENST00000537888 GALNT16Q8N428 558 aa11.76□□□□□ -0.53
PEX11B-203ENST00000537888 DYNC2LI1Q8TCX1 351 aa11.76□□□□□ -0.53
PEX11B-203ENST00000537888 LGALS12Q96DT0 336 aa11.76□□□□□ -0.53
PEX11B-203ENST00000537888 VMP1Q96GC9 406 aa11.76□□□□□ -0.53
PEX11B-203ENST00000537888 LRR1Q96L50 414 aa11.76□□□□□ -0.53
PEX11B-203ENST00000537888 DACH2Q96NX9 599 aa11.76□□□□□ -0.53
PEX11B-203ENST00000537888 ZNF426Q9BUY5 554 aa11.76□□□□□ -0.53
PEX11B-203ENST00000537888 CNPPD1Q9BV87 410 aa11.76□□□□□ -0.53
PEX11B-203ENST00000537888 ZNF552Q9H707 407 aaPredicted RBP11.76□□□□□ -0.53
PEX11B-203ENST00000537888 FGF20Q9NP95 211 aaPredicted RBP11.76□□□□□ -0.53
PEX11B-203ENST00000537888 MKKSQ9NPJ1 570 aaPredicted RBP11.76□□□□□ -0.53
PEX11B-203ENST00000537888 DNAJB12Q9NXW2 375 aaKnown RBP11.76□□□□□ -0.53
PEX11B-203ENST00000537888 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.76□□□□□ -0.53
PEX11B-203ENST00000537888 DIMT1Q9UNQ2 313 aaKnown RBP11.76□□□□□ -0.53
PEX11B-203ENST00000537888 DTX4Q9Y2E6 619 aa11.76□□□□□ -0.53
PEX11B-203ENST00000537888 LRRK2Q5S007 2527 aa11.76□□□□□ -0.53
PEX11B-203ENST00000537888 SCN2AQ99250 2005 aa11.76□□□□□ -0.53
PEX11B-203ENST00000537888 A0A0B4J2E0 115 aa11.75□□□□□ -0.53
PEX11B-203ENST00000537888 A0A1B0GX12 115 aa11.75□□□□□ -0.53
PEX11B-203ENST00000537888 A6NL46 340 aa11.75□□□□□ -0.53
PEX11B-203ENST00000537888 IDSB3KWA1 339 aa11.75□□□□□ -0.53
PEX11B-203ENST00000537888 CHP2O43745 196 aa11.75□□□□□ -0.53
PEX11B-203ENST00000537888 ALOX12BO75342 701 aa11.75□□□□□ -0.53
PEX11B-203ENST00000537888 NTN1O95631 604 aa11.75□□□□□ -0.53
PEX11B-203ENST00000537888 RGS6P49758 472 aa11.75□□□□□ -0.53
PEX11B-203ENST00000537888 GAS1P54826 345 aa11.75□□□□□ -0.53
PEX11B-203ENST00000537888 TUBA1BP68363 451 aa11.75□□□□□ -0.53
PEX11B-203ENST00000537888 PGGHGQ32M88 737 aa11.75□□□□□ -0.53
PEX11B-203ENST00000537888 ZNF829Q3KNS6 432 aaPredicted RBP11.75□□□□□ -0.53
PEX11B-203ENST00000537888 KLHL22Q53GT1 634 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms