RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 PERM1Q5SV97 790 aa12.46□□□□□ -0.42
SMG6-203ENST00000536871 ARHGAP40Q5TG30 622 aa12.46□□□□□ -0.42
SMG6-203ENST00000536871 THSD4Q6ZMP0 1018 aa12.46□□□□□ -0.42
SMG6-203ENST00000536871 LYSMD2Q8IV50 215 aa12.46□□□□□ -0.42
SMG6-203ENST00000536871 ATP6V1C2Q8NEY4 427 aa12.46□□□□□ -0.42
SMG6-203ENST00000536871 BBS1Q8NFJ9 593 aa12.46□□□□□ -0.42
SMG6-203ENST00000536871 ELOA3Q8NG57 546 aa12.46□□□□□ -0.42
SMG6-203ENST00000536871 ZNF721Q8TF20 911 aa12.46□□□□□ -0.42
SMG6-203ENST00000536871 SPRYD4Q8WW59 207 aaPredicted RBP12.46□□□□□ -0.42
SMG6-203ENST00000536871 KIAA1143Q96AT1 154 aaPredicted RBP12.46□□□□□ -0.42
SMG6-203ENST00000536871 OTULINQ96BN8 352 aa12.46□□□□□ -0.42
SMG6-203ENST00000536871 C3orf49Q96BT1 292 aa12.46□□□□□ -0.42
SMG6-203ENST00000536871 TNFRSF13CQ96RJ3 184 aa12.46□□□□□ -0.42
SMG6-203ENST00000536871 ALG8Q9BVK2 526 aa12.46□□□□□ -0.42
SMG6-203ENST00000536871 SNTG1Q9NSN8 517 aa12.46□□□□□ -0.42
SMG6-203ENST00000536871 IL20RAQ9UHF4 553 aa12.46□□□□□ -0.42
SMG6-203ENST00000536871 CMAHPQ9Y471 501 aa12.46□□□□□ -0.42
SMG6-203ENST00000536871 TRAV27A0A087WT01 109 aa12.45□□□□□ -0.42
SMG6-203ENST00000536871 EIF4E2O60573 245 aaKnown RBP12.45□□□□□ -0.42
SMG6-203ENST00000536871 RFPL3O75679 317 aa12.45□□□□□ -0.42
SMG6-203ENST00000536871 UTS2O95399 124 aa12.45□□□□□ -0.42
SMG6-203ENST00000536871 SBK2P0C263 348 aa12.45□□□□□ -0.42
SMG6-203ENST00000536871 FUT1P19526 365 aa12.45□□□□□ -0.42
SMG6-203ENST00000536871 SLC2A5P22732 501 aa12.45□□□□□ -0.42
SMG6-203ENST00000536871 PTBP1P26599 531 aaKnown RBP eCLIP12.45□□□□□ -0.424e-7■■■■□ 26.4
SMG6-203ENST00000536871 OR1D4P47884 311 aa12.45□□□□□ -0.42
SMG6-203ENST00000536871 ACTA2P62736 377 aa12.45□□□□□ -0.42
SMG6-203ENST00000536871 ACTG2P63267 376 aa12.45□□□□□ -0.42
SMG6-203ENST00000536871 SKP2Q13309 424 aa12.45□□□□□ -0.42
SMG6-203ENST00000536871 KCNAB1Q14722 419 aa12.45□□□□□ -0.42
SMG6-203ENST00000536871 NR0B2Q15466 257 aa12.45□□□□□ -0.42
SMG6-203ENST00000536871 KLHL12Q53G59 568 aa12.45□□□□□ -0.42
SMG6-203ENST00000536871 SLC35F1Q5T1Q4 408 aa12.45□□□□□ -0.42
SMG6-203ENST00000536871 DDI2Q5TDH0 399 aa12.45□□□□□ -0.42
SMG6-203ENST00000536871 C22orf42Q6IC83 251 aa12.45□□□□□ -0.42
SMG6-203ENST00000536871 RHBDD2Q6NTF9 364 aa12.45□□□□□ -0.42
SMG6-203ENST00000536871 IQCF2Q8IXL9 164 aa12.45□□□□□ -0.42
SMG6-203ENST00000536871 SIRT6Q8N6T7 355 aa12.45□□□□□ -0.42
SMG6-203ENST00000536871 PTP4A1Q93096 173 aa12.45□□□□□ -0.42
SMG6-203ENST00000536871 ADIPOR1Q96A54 375 aa12.45□□□□□ -0.42
SMG6-203ENST00000536871 NACC2Q96BF6 587 aa12.45□□□□□ -0.42
SMG6-203ENST00000536871 ZNF501Q96CX3 271 aaPredicted RBP12.45□□□□□ -0.42
SMG6-203ENST00000536871 TMCO6Q96DC7 493 aa12.45□□□□□ -0.42
SMG6-203ENST00000536871 CDX2Q99626 313 aaPredicted RBP12.45□□□□□ -0.42
SMG6-203ENST00000536871 OR8D2Q9GZM6 311 aa12.45□□□□□ -0.42
SMG6-203ENST00000536871 FGF21Q9NSA1 209 aa12.45□□□□□ -0.42
SMG6-203ENST00000536871 CHRNA9Q9UGM1 479 aa12.45□□□□□ -0.42
SMG6-203ENST00000536871 CCDC182A6NF36 153 aa12.44□□□□□ -0.42
SMG6-203ENST00000536871 FAM183AA6NL82 134 aa12.44□□□□□ -0.42
SMG6-203ENST00000536871 RGS5O15539 181 aa12.44□□□□□ -0.42
SMG6-203ENST00000536871 APOL3O95236 402 aa12.44□□□□□ -0.42
SMG6-203ENST00000536871 PPP1R3DO95685 299 aa12.44□□□□□ -0.42
SMG6-203ENST00000536871 DDAH2O95865 285 aa12.44□□□□□ -0.42
SMG6-203ENST00000536871 CYC1P08574 325 aa12.44□□□□□ -0.42
SMG6-203ENST00000536871 GIMD1P0DJR0 217 aa12.44□□□□□ -0.42
SMG6-203ENST00000536871 CELP19835 753 aa12.44□□□□□ -0.42
SMG6-203ENST00000536871 EPHA8P29322 1005 aaPredicted RBP12.44□□□□□ -0.42
SMG6-203ENST00000536871 IL12BP29460 328 aa12.44□□□□□ -0.42
SMG6-203ENST00000536871 TNFSF8P32971 234 aa12.44□□□□□ -0.42
SMG6-203ENST00000536871 PNLIPRP2P54317 469 aa12.44□□□□□ -0.42
SMG6-203ENST00000536871 RPS4XP62701 263 aaKnown RBP12.44□□□□□ -0.42
SMG6-203ENST00000536871 RPS25P62851 125 aaKnown RBP12.44□□□□□ -0.42
SMG6-203ENST00000536871 IFITM3Q01628 133 aa12.44□□□□□ -0.42
SMG6-203ENST00000536871 HSF2Q03933 536 aa12.44□□□□□ -0.42
SMG6-203ENST00000536871 DOC2BQ14184 412 aa12.44□□□□□ -0.42
SMG6-203ENST00000536871 GGTLC2Q14390 218 aa12.44□□□□□ -0.42
SMG6-203ENST00000536871 NSDHLQ15738 373 aa12.44□□□□□ -0.42
SMG6-203ENST00000536871 KCNJ8Q15842 424 aa12.44□□□□□ -0.42
SMG6-203ENST00000536871 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.44□□□□□ -0.42
SMG6-203ENST00000536871 MZT2AQ6P582 158 aa12.44□□□□□ -0.42
SMG6-203ENST00000536871 PRR23CQ6ZRP0 262 aa12.44□□□□□ -0.42
SMG6-203ENST00000536871 CACTIN-AS1Q8N1I8 211 aa12.44□□□□□ -0.42
SMG6-203ENST00000536871 ARIH2OSQ8N7S6 290 aa12.44□□□□□ -0.42
SMG6-203ENST00000536871 ZSCAN1Q8NBB4 408 aa12.44□□□□□ -0.42
SMG6-203ENST00000536871 OR1N1Q8NGS0 311 aa12.44□□□□□ -0.42
SMG6-203ENST00000536871 PHOSPHO1Q8TCT1 267 aa12.44□□□□□ -0.42
SMG6-203ENST00000536871 HAVCR2Q8TDQ0 301 aa12.44□□□□□ -0.42
SMG6-203ENST00000536871 ACOT12Q8WYK0 555 aa12.44□□□□□ -0.42
SMG6-203ENST00000536871 KISS1RQ969F8 398 aaPredicted RBP12.44□□□□□ -0.42
SMG6-203ENST00000536871 ERMAPQ96PL5 475 aaPredicted RBP12.44□□□□□ -0.42
SMG6-203ENST00000536871 NXF5Q9H1B4 397 aaKnown RBP12.44□□□□□ -0.42
SMG6-203ENST00000536871 ABCB10Q9NRK6 738 aa12.44□□□□□ -0.42
SMG6-203ENST00000536871 ADAM30Q9UKF2 790 aa12.44□□□□□ -0.42
SMG6-203ENST00000536871 WWP2O00308 870 aa12.44□□□□□ -0.42
SMG6-203ENST00000536871 TBX1O43435 398 aa12.44□□□□□ -0.42
SMG6-203ENST00000536871 ADAM11O75078 769 aa12.44□□□□□ -0.42
SMG6-203ENST00000536871 RGS9O75916 674 aaPredicted RBP12.44□□□□□ -0.42
SMG6-203ENST00000536871 OR2T7P0C7T2 308 aa12.44□□□□□ -0.42
SMG6-203ENST00000536871 FOLR1P15328 257 aa12.44□□□□□ -0.42
SMG6-203ENST00000536871 CSF2RBP32927 897 aa12.44□□□□□ -0.42
SMG6-203ENST00000536871 SDC2P34741 201 aa12.44□□□□□ -0.42
SMG6-203ENST00000536871 PPP3R1P63098 170 aa12.44□□□□□ -0.42
SMG6-203ENST00000536871 CFHR1Q03591 330 aa12.44□□□□□ -0.42
SMG6-203ENST00000536871 CRMP1Q14194 572 aa12.44□□□□□ -0.42
SMG6-203ENST00000536871 EBPQ15125 230 aaKnown RBP12.44□□□□□ -0.42
SMG6-203ENST00000536871 EMC4Q5J8M3 183 aa12.44□□□□□ -0.42
SMG6-203ENST00000536871 METAP1DQ6UB28 335 aaPredicted RBP12.44□□□□□ -0.42
SMG6-203ENST00000536871 PAMR1Q6UXH9 720 aa12.44□□□□□ -0.42
SMG6-203ENST00000536871 SHFQ7M4L6 423 aa12.44□□□□□ -0.42
SMG6-203ENST00000536871 ATG4DQ86TL0 474 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms