RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.31□□□□□ -1.4
YBX3-206ENST00000536823 ANXA8L1Q5VT79 327 aa6.31□□□□□ -1.4
YBX3-206ENST00000536823 EEF1A1P5Q5VTE0 462 aa6.31□□□□□ -1.4
YBX3-206ENST00000536823 STEAP3Q658P3 488 aa6.31□□□□□ -1.4
YBX3-206ENST00000536823 ATG16L1Q676U5 607 aa6.31□□□□□ -1.4
YBX3-206ENST00000536823 OR2A2Q6IF42 318 aa6.31□□□□□ -1.4
YBX3-206ENST00000536823 P4HA3Q7Z4N8 544 aa6.31□□□□□ -1.4
YBX3-206ENST00000536823 SPATA19Q7Z5L4 167 aa6.31□□□□□ -1.4
YBX3-206ENST00000536823 MTERF4Q7Z6M4 381 aaKnown RBP6.31□□□□□ -1.4
YBX3-206ENST00000536823 TMEM200AQ86VY9 491 aa6.31□□□□□ -1.4
YBX3-206ENST00000536823 ANKRD46Q86W74 232 aa6.31□□□□□ -1.4
YBX3-206ENST00000536823 ZZZ3Q8IYH5 903 aa6.31□□□□□ -1.4
YBX3-206ENST00000536823 CHDHQ8NE62 594 aaPredicted RBP6.31□□□□□ -1.4
YBX3-206ENST00000536823 OR5D16Q8NGK9 328 aa6.31□□□□□ -1.4
YBX3-206ENST00000536823 OR4A15Q8NGL6 344 aa6.31□□□□□ -1.4
YBX3-206ENST00000536823 B4GALNT2Q8NHY0 566 aa6.31□□□□□ -1.4
YBX3-206ENST00000536823 FNDC9Q8TBE3 224 aa6.31□□□□□ -1.4
YBX3-206ENST00000536823 MIPOL1Q8TD10 442 aa6.31□□□□□ -1.4
YBX3-206ENST00000536823 FIG4Q92562 907 aa6.31□□□□□ -1.4
YBX3-206ENST00000536823 ZBTB8AQ96BR9 441 aa6.31□□□□□ -1.4
YBX3-206ENST00000536823 ADGRG7Q96K78 797 aa6.31□□□□□ -1.4
YBX3-206ENST00000536823 RNF145Q96MT1 663 aa6.31□□□□□ -1.4
YBX3-206ENST00000536823 CCDC115Q96NT0 180 aa6.31□□□□□ -1.4
YBX3-206ENST00000536823 OR7D2Q96RA2 312 aa6.31□□□□□ -1.4
YBX3-206ENST00000536823 NPAS1Q99742 590 aa6.31□□□□□ -1.4
YBX3-206ENST00000536823 KLHDC3Q9BQ90 382 aa6.31□□□□□ -1.4
YBX3-206ENST00000536823 RBM24Q9BX46 236 aaKnown RBP6.31□□□□□ -1.4
YBX3-206ENST00000536823 PINK1Q9BXM7 581 aa6.31□□□□□ -1.4
YBX3-206ENST00000536823 NMUR2Q9GZQ4 415 aa6.31□□□□□ -1.4
YBX3-206ENST00000536823 HOXD1Q9GZZ0 328 aa6.31□□□□□ -1.4
YBX3-206ENST00000536823 IFT22Q9H7X7 185 aa6.31□□□□□ -1.4
YBX3-206ENST00000536823 AIG1Q9NVV5 245 aa6.31□□□□□ -1.4
YBX3-206ENST00000536823 GALNT8Q9NY28 637 aa6.31□□□□□ -1.4
YBX3-206ENST00000536823 MARCOQ9UEW3 520 aaPredicted RBP6.31□□□□□ -1.4
YBX3-206ENST00000536823 PACSIN3Q9UKS6 424 aa6.31□□□□□ -1.4
YBX3-206ENST00000536823 PCDHGB4Q9UN71 923 aa6.31□□□□□ -1.4
YBX3-206ENST00000536823 VDAC3Q9Y277 283 aa6.31□□□□□ -1.4
YBX3-206ENST00000536823 CADP27708 2225 aa6.3□□□□□ -1.4
YBX3-206ENST00000536823 TLN2Q9Y4G6 2542 aa6.3□□□□□ -1.4
YBX3-206ENST00000536823 FREM1Q5H8C1 2179 aa6.3□□□□□ -1.4
YBX3-206ENST00000536823 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.3□□□□□ -1.4
YBX3-206ENST00000536823 DUXAA6NLW8 204 aa6.3□□□□□ -1.4
YBX3-206ENST00000536823 A6NNC1 897 aa6.3□□□□□ -1.4
YBX3-206ENST00000536823 SLCO1B7G3V0H7 640 aa6.3□□□□□ -1.4
YBX3-206ENST00000536823 H3BNH8 94 aa6.3□□□□□ -1.4
YBX3-206ENST00000536823 KLF11O14901 512 aa6.3□□□□□ -1.4
YBX3-206ENST00000536823 KIAA0513O60268 411 aa6.3□□□□□ -1.4
YBX3-206ENST00000536823 CTAG2O75638 210 aa6.3□□□□□ -1.4
YBX3-206ENST00000536823 TNFSF13O75888 250 aa6.3□□□□□ -1.4
YBX3-206ENST00000536823 GOSR1O95249 250 aa6.3□□□□□ -1.4
YBX3-206ENST00000536823 LINGO3P0C6S8 592 aa6.3□□□□□ -1.4
YBX3-206ENST00000536823 UQCRC2P22695 453 aa6.3□□□□□ -1.4
YBX3-206ENST00000536823 ME2P23368 584 aa6.3□□□□□ -1.4
YBX3-206ENST00000536823 PSMA4P25789 261 aaKnown RBP6.3□□□□□ -1.4
YBX3-206ENST00000536823 ELK4P28324 431 aa6.3□□□□□ -1.4
YBX3-206ENST00000536823 EPHA3P29320 983 aa6.3□□□□□ -1.4
YBX3-206ENST00000536823 IL12AP29459 219 aa6.3□□□□□ -1.4
YBX3-206ENST00000536823 S100A3P33764 101 aa6.3□□□□□ -1.4
YBX3-206ENST00000536823 EIF1P41567 113 aaKnown RBP6.3□□□□□ -1.4
YBX3-206ENST00000536823 CPA2P48052 419 aa6.3□□□□□ -1.4
YBX3-206ENST00000536823 KHKP50053 298 aa6.3□□□□□ -1.4
YBX3-206ENST00000536823 P2RX1P51575 399 aa6.3□□□□□ -1.4
YBX3-206ENST00000536823 FOXF1Q12946 379 aa6.3□□□□□ -1.4
YBX3-206ENST00000536823 SNTB1Q13884 538 aaKnown RBP6.3□□□□□ -1.4
YBX3-206ENST00000536823 PON3Q15166 354 aa6.3□□□□□ -1.4
YBX3-206ENST00000536823 GUSBP1Q15486 140 aa6.3□□□□□ -1.4
YBX3-206ENST00000536823 CTU2Q2VPK5 515 aaKnown RBP6.3□□□□□ -1.4
YBX3-206ENST00000536823 FAM174BQ3ZCQ3 159 aa6.3□□□□□ -1.4
YBX3-206ENST00000536823 AGBL2Q5U5Z8 902 aa6.3□□□□□ -1.4
YBX3-206ENST00000536823 SAXO2Q658L1 398 aa6.3□□□□□ -1.4
YBX3-206ENST00000536823 TNFAIP8L2Q6P589 184 aaPredicted RBP6.3□□□□□ -1.4
YBX3-206ENST00000536823 C16orf62Q7Z3J2 963 aa6.3□□□□□ -1.4
YBX3-206ENST00000536823 C6orf120Q7Z4R8 191 aa6.3□□□□□ -1.4
YBX3-206ENST00000536823 LUZP2Q86TE4 346 aa6.3□□□□□ -1.4
YBX3-206ENST00000536823 WDR75Q8IWA0 830 aaKnown RBP6.3□□□□□ -1.4
YBX3-206ENST00000536823 VPS37AQ8NEZ2 397 aa6.3□□□□□ -1.4
YBX3-206ENST00000536823 POC1BQ8TC44 478 aa6.3□□□□□ -1.4
YBX3-206ENST00000536823 NEURL3Q96EH8 262 aa6.3□□□□□ -1.4
YBX3-206ENST00000536823 ZNF845Q96IR2 970 aaPredicted RBP6.3□□□□□ -1.4
YBX3-206ENST00000536823 TEX37Q96LM6 180 aa6.3□□□□□ -1.4
YBX3-206ENST00000536823 SDF2Q99470 211 aa6.3□□□□□ -1.4
YBX3-206ENST00000536823 GPATCH1Q9BRR8 931 aaKnown RBP6.3□□□□□ -1.4
YBX3-206ENST00000536823 ZNF350Q9GZX5 532 aa6.3□□□□□ -1.4
YBX3-206ENST00000536823 OR51I1Q9H343 314 aa6.3□□□□□ -1.4
YBX3-206ENST00000536823 RNF122Q9H9V4 155 aa6.3□□□□□ -1.4
YBX3-206ENST00000536823 POLE3Q9NRF9 147 aa6.3□□□□□ -1.4
YBX3-206ENST00000536823 RASSF1Q9NS23 344 aa6.3□□□□□ -1.4
YBX3-206ENST00000536823 BTNL2Q9UIR0 455 aa6.3□□□□□ -1.4
YBX3-206ENST00000536823 DTNAQ9Y4J8 743 aa6.3□□□□□ -1.4
YBX3-206ENST00000536823 GPR45Q9Y5Y3 372 aa6.3□□□□□ -1.4
YBX3-206ENST00000536823 PLCE1Q9P212 2302 aa6.3□□□□□ -1.4
YBX3-206ENST00000536823 NAV3Q8IVL0 2385 aa6.29□□□□□ -1.4
YBX3-206ENST00000536823 A0A0J9YW62 118 aa6.29□□□□□ -1.4
YBX3-206ENST00000536823 GOLGA8QA0A0J9YX86 632 aa6.29□□□□□ -1.4
YBX3-206ENST00000536823 CENPVL1A0A0U1RR11 272 aa6.29□□□□□ -1.4
YBX3-206ENST00000536823 GOLGA8OA6NCC3 632 aa6.29□□□□□ -1.4
YBX3-206ENST00000536823 TUBAL3A6NHL2 446 aa6.29□□□□□ -1.4
YBX3-206ENST00000536823 A8MXE2 369 aa6.29□□□□□ -1.4
YBX3-206ENST00000536823 C9JVG2 144 aa6.29□□□□□ -1.4
YBX3-206ENST00000536823 GOLGA8NF8WBI6 632 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms