RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 PIGHQ14442 188 aaPredicted RBP4.6□□□□□ -1.67
CLIP1-207ENST00000536634 GRB7Q14451 532 aa4.6□□□□□ -1.67
CLIP1-207ENST00000536634 HKDC1Q2TB90 917 aa4.6□□□□□ -1.67
CLIP1-207ENST00000536634 TEX44Q53QW1 395 aa4.6□□□□□ -1.67
CLIP1-207ENST00000536634 DHRS7BQ6IAN0 325 aaPredicted RBP4.6□□□□□ -1.67
CLIP1-207ENST00000536634 SLC25A25Q6KCM7 469 aa4.6□□□□□ -1.67
CLIP1-207ENST00000536634 PPP1R2P3Q6NXS1 205 aa4.6□□□□□ -1.67
CLIP1-207ENST00000536634 UNC5DQ6UXZ4 953 aa4.6□□□□□ -1.67
CLIP1-207ENST00000536634 TBC1D21Q8IYX1 336 aa4.6□□□□□ -1.67
CLIP1-207ENST00000536634 MAPKAPK5-AS1Q8N8E1 139 aa4.6□□□□□ -1.67
CLIP1-207ENST00000536634 KCTD6Q8NC69 237 aa4.6□□□□□ -1.67
CLIP1-207ENST00000536634 PAPD5Q8NDF8 572 aaKnown RBP4.6□□□□□ -1.67
CLIP1-207ENST00000536634 IPMKQ8NFU5 416 aa4.6□□□□□ -1.67
CLIP1-207ENST00000536634 OR5M9Q8NGP3 310 aa4.6□□□□□ -1.67
CLIP1-207ENST00000536634 OR13C4Q8NGS5 318 aa4.6□□□□□ -1.67
CLIP1-207ENST00000536634 OR2T11Q8NH01 316 aa4.6□□□□□ -1.67
CLIP1-207ENST00000536634 PTPMT1Q8WUK0 201 aaPredicted RBP4.6□□□□□ -1.67
CLIP1-207ENST00000536634 SLCO2A1Q92959 643 aa4.6□□□□□ -1.67
CLIP1-207ENST00000536634 NSL1Q96IY1 281 aa4.6□□□□□ -1.67
CLIP1-207ENST00000536634 RNF157Q96PX1 679 aa4.6□□□□□ -1.67
CLIP1-207ENST00000536634 COPS8Q99627 209 aa4.6□□□□□ -1.67
CLIP1-207ENST00000536634 LMF2Q9BU23 707 aaKnown RBP4.6□□□□□ -1.67
CLIP1-207ENST00000536634 FICDQ9BVA6 458 aa4.6□□□□□ -1.67
CLIP1-207ENST00000536634 KCNK13Q9HB14 408 aa4.6□□□□□ -1.67
CLIP1-207ENST00000536634 MRPL47Q9HD33 250 aaKnown RBP4.6□□□□□ -1.67
CLIP1-207ENST00000536634 PNPLA3Q9NST1 481 aa4.6□□□□□ -1.67
CLIP1-207ENST00000536634 ATAD3AQ9NVI7 634 aa4.6□□□□□ -1.67
CLIP1-207ENST00000536634 C14orf105Q9NVL8 296 aa4.6□□□□□ -1.67
CLIP1-207ENST00000536634 PSD3Q9NYI0 1048 aa4.6□□□□□ -1.67
CLIP1-207ENST00000536634 HACD3Q9P035 362 aa4.6□□□□□ -1.67
CLIP1-207ENST00000536634 FAM153AQ9UHL3 310 aa4.6□□□□□ -1.67
CLIP1-207ENST00000536634 PCDHGB4Q9UN71 923 aa4.6□□□□□ -1.67
CLIP1-207ENST00000536634 WBP11Q9Y2W2 641 aaKnown RBP4.6□□□□□ -1.67
CLIP1-207ENST00000536634 FAM215AQ9Y5M1 114 aa4.6□□□□□ -1.67
CLIP1-207ENST00000536634 KIAA1549Q9HCM3 1950 aa4.6□□□□□ -1.67
CLIP1-207ENST00000536634 SLC5A10A0PJK1 596 aa4.59□□□□□ -1.67
CLIP1-207ENST00000536634 MEIOCA2RUB1 952 aa4.59□□□□□ -1.67
CLIP1-207ENST00000536634 H0YGG7 62 aa4.59□□□□□ -1.67
CLIP1-207ENST00000536634 CRLF1O75462 422 aa4.59□□□□□ -1.67
CLIP1-207ENST00000536634 TSPAN9O75954 239 aa4.59□□□□□ -1.67
CLIP1-207ENST00000536634 AP2A1O95782 977 aa4.59□□□□□ -1.67
CLIP1-207ENST00000536634 AGTP01019 485 aa4.59□□□□□ -1.67
CLIP1-207ENST00000536634 EPOP01588 193 aa4.59□□□□□ -1.67
CLIP1-207ENST00000536634 FAM157CP0CG43 387 aa4.59□□□□□ -1.67
CLIP1-207ENST00000536634 MYBL1P10243 752 aa4.59□□□□□ -1.67
CLIP1-207ENST00000536634 GZMAP12544 262 aa4.59□□□□□ -1.67
CLIP1-207ENST00000536634 CD9P21926 228 aa4.59□□□□□ -1.67
CLIP1-207ENST00000536634 KDELR1P24390 212 aa4.59□□□□□ -1.67
CLIP1-207ENST00000536634 CSE1LP55060 971 aaKnown RBP4.59□□□□□ -1.67
CLIP1-207ENST00000536634 IRX1P78414 480 aaPredicted RBP4.59□□□□□ -1.67
CLIP1-207ENST00000536634 EPS8Q12929 822 aa4.59□□□□□ -1.67
CLIP1-207ENST00000536634 MSLNQ13421 630 aaPredicted RBP4.59□□□□□ -1.67
CLIP1-207ENST00000536634 TAZQ16635 292 aa4.59□□□□□ -1.67
CLIP1-207ENST00000536634 SHEQ5VZ18 495 aa4.59□□□□□ -1.67
CLIP1-207ENST00000536634 RTL6Q6ICC9 239 aa4.59□□□□□ -1.67
CLIP1-207ENST00000536634 EML6Q6ZMW3 1958 aa4.59□□□□□ -1.67
CLIP1-207ENST00000536634 C16orf47Q6ZP98 133 aaPredicted RBP4.59□□□□□ -1.67
CLIP1-207ENST00000536634 TMPRSS11FQ6ZWK6 438 aa4.59□□□□□ -1.67
CLIP1-207ENST00000536634 PRSS41Q7RTY9 318 aa4.59□□□□□ -1.67
CLIP1-207ENST00000536634 APTXQ7Z2E3 356 aaKnown RBP4.59□□□□□ -1.67
CLIP1-207ENST00000536634 CPEB2Q7Z5Q1 589 aaKnown RBP4.59□□□□□ -1.67
CLIP1-207ENST00000536634 SNX20Q7Z614 316 aa4.59□□□□□ -1.67
CLIP1-207ENST00000536634 MTERF4Q7Z6M4 381 aaKnown RBP4.59□□□□□ -1.67
CLIP1-207ENST00000536634 ANKRD37Q7Z713 158 aa4.59□□□□□ -1.67
CLIP1-207ENST00000536634 SERPINA9Q86WD7 417 aa4.59□□□□□ -1.67
CLIP1-207ENST00000536634 PIANPQ8IYJ0 282 aa4.59□□□□□ -1.67
CLIP1-207ENST00000536634 KIF2BQ8N4N8 673 aa4.59□□□□□ -1.67
CLIP1-207ENST00000536634 RELL2Q8NC24 303 aaPredicted RBP4.59□□□□□ -1.67
CLIP1-207ENST00000536634 OR10Q1Q8NGQ4 319 aa4.59□□□□□ -1.67
CLIP1-207ENST00000536634 MOSPD2Q8NHP6 518 aa4.59□□□□□ -1.67
CLIP1-207ENST00000536634 HPSE2Q8WWQ2 592 aa4.59□□□□□ -1.67
CLIP1-207ENST00000536634 ELMO1Q92556 727 aa4.59□□□□□ -1.67
CLIP1-207ENST00000536634 SLC22A18Q96BI1 424 aa4.59□□□□□ -1.67
CLIP1-207ENST00000536634 GMPPAQ96IJ6 420 aaPredicted RBP4.59□□□□□ -1.67
CLIP1-207ENST00000536634 DNAJC1Q96KC8 554 aaKnown RBP4.59□□□□□ -1.67
CLIP1-207ENST00000536634 CABS1Q96KC9 395 aa4.59□□□□□ -1.67
CLIP1-207ENST00000536634 ERGIC2Q96RQ1 377 aa4.59□□□□□ -1.67
CLIP1-207ENST00000536634 APOL2Q9BQE5 337 aa4.59□□□□□ -1.67
CLIP1-207ENST00000536634 TTYH2Q9BSA4 534 aa4.59□□□□□ -1.67
CLIP1-207ENST00000536634 BTBD10Q9BSF8 475 aa4.59□□□□□ -1.67
CLIP1-207ENST00000536634 VPS37BQ9H9H4 285 aa4.59□□□□□ -1.67
CLIP1-207ENST00000536634 SDR39U1Q9NRG7 319 aaPredicted RBP4.59□□□□□ -1.67
CLIP1-207ENST00000536634 ZNF701Q9NV72 531 aaPredicted RBP4.59□□□□□ -1.67
CLIP1-207ENST00000536634 FLRT3Q9NZU0 649 aa4.59□□□□□ -1.67
CLIP1-207ENST00000536634 KLK4Q9Y5K2 254 aa4.59□□□□□ -1.67
CLIP1-207ENST00000536634 LIPGQ9Y5X9 500 aa4.59□□□□□ -1.67
CLIP1-207ENST00000536634 FAM169AQ9Y6X4 670 aa4.59□□□□□ -1.67
CLIP1-207ENST00000536634 NOTCH1P46531 2555 aa4.58□□□□□ -1.68
CLIP1-207ENST00000536634 IGHV4-4A0A075B6R2 117 aa4.58□□□□□ -1.68
CLIP1-207ENST00000536634 A0A0A6YYC8 382 aaPredicted RBP4.58□□□□□ -1.68
CLIP1-207ENST00000536634 TRBV5-4A0A0C4DH59 114 aa4.58□□□□□ -1.68
CLIP1-207ENST00000536634 IGKV1-8A0A0C4DH67 115 aa4.58□□□□□ -1.68
CLIP1-207ENST00000536634 A0A1W2PN81 502 aa4.58□□□□□ -1.68
CLIP1-207ENST00000536634 A0A1W2PPV9 198 aa4.58□□□□□ -1.68
CLIP1-207ENST00000536634 PINLYPA6NC86 204 aa4.58□□□□□ -1.68
CLIP1-207ENST00000536634 USP27XA6NNY8 438 aa4.58□□□□□ -1.68
CLIP1-207ENST00000536634 ARHGEF33A8MVX0 844 aa4.58□□□□□ -1.68
CLIP1-207ENST00000536634 HMGB1P1B2RPK0 211 aaPredicted RBP4.58□□□□□ -1.68
CLIP1-207ENST00000536634 NPIPA2E9PIF3 369 aa4.58□□□□□ -1.68
CLIP1-207ENST00000536634 NPIPA3F8WFD2 350 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms