RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 TIGD2Q4W5G0 525 aa11.09□□□□□ -0.63
PRKDC-207ENST00000536483 C20orf204Q6ZNR8 217 aa11.09□□□□□ -0.63
PRKDC-207ENST00000536483 PLEKHM3Q6ZWE6 761 aa11.09□□□□□ -0.63
PRKDC-207ENST00000536483 OLIG3Q7RTU3 272 aa11.09□□□□□ -0.63
PRKDC-207ENST00000536483 SLC43A2Q8N370 569 aa11.09□□□□□ -0.63
PRKDC-207ENST00000536483 ZNF614Q8N883 585 aa11.09□□□□□ -0.63
PRKDC-207ENST00000536483 SLC25A43Q8WUT9 341 aaPredicted RBP11.09□□□□□ -0.63
PRKDC-207ENST00000536483 VPS33AQ96AX1 596 aa11.09□□□□□ -0.63
PRKDC-207ENST00000536483 MARK4Q96L34 752 aa11.09□□□□□ -0.63
PRKDC-207ENST00000536483 CCDC106Q9BWC9 280 aa11.09□□□□□ -0.63
PRKDC-207ENST00000536483 OR10A4Q9H209 315 aa11.09□□□□□ -0.63
PRKDC-207ENST00000536483 ZNF385DQ9H6B1 395 aa11.09□□□□□ -0.63
PRKDC-207ENST00000536483 BCL2L10Q9HD36 194 aa11.09□□□□□ -0.63
PRKDC-207ENST00000536483 PCDHB14Q9Y5E9 798 aa11.09□□□□□ -0.63
PRKDC-207ENST00000536483 ZANQ9Y493 2812 aa11.09□□□□□ -0.63
PRKDC-207ENST00000536483 DSCAMO60469 2012 aa11.09□□□□□ -0.63
PRKDC-207ENST00000536483 TRBV5-3A0A0A0MS03 114 aa11.08□□□□□ -0.64
PRKDC-207ENST00000536483 ERICH4A6NGS2 130 aa11.08□□□□□ -0.64
PRKDC-207ENST00000536483 INAFM1C9JVW0 142 aa11.08□□□□□ -0.64
PRKDC-207ENST00000536483 EDF1O60869 148 aaKnown RBP11.08□□□□□ -0.64
PRKDC-207ENST00000536483 ADAM11O75078 769 aa11.08□□□□□ -0.64
PRKDC-207ENST00000536483 BCAS1O75363 584 aaPredicted RBP11.08□□□□□ -0.64
PRKDC-207ENST00000536483 DBIP07108 87 aaKnown RBP11.08□□□□□ -0.64
PRKDC-207ENST00000536483 THBS1P07996 1170 aa11.08□□□□□ -0.64
PRKDC-207ENST00000536483 UBTFL6P0CB48 400 aaPredicted RBP11.08□□□□□ -0.64
PRKDC-207ENST00000536483 HTR3AP46098 478 aa11.08□□□□□ -0.64
PRKDC-207ENST00000536483 STX1BP61266 288 aa11.08□□□□□ -0.64
PRKDC-207ENST00000536483 HPCAP84074 193 aa11.08□□□□□ -0.64
PRKDC-207ENST00000536483 GUCY1A3Q02108 690 aa11.08□□□□□ -0.64
PRKDC-207ENST00000536483 GNA13Q14344 377 aa11.08□□□□□ -0.64
PRKDC-207ENST00000536483 RGNQ15493 299 aa11.08□□□□□ -0.64
PRKDC-207ENST00000536483 EXOC3L2Q2M3D2 409 aa11.08□□□□□ -0.64
PRKDC-207ENST00000536483 GPAT3Q53EU6 434 aa11.08□□□□□ -0.64
PRKDC-207ENST00000536483 METTL21CQ5VZV1 264 aa11.08□□□□□ -0.64
PRKDC-207ENST00000536483 C3orf33Q6P1S2 294 aa11.08□□□□□ -0.64
PRKDC-207ENST00000536483 GRINAQ7Z429 371 aa11.08□□□□□ -0.64
PRKDC-207ENST00000536483 MSRB3Q8IXL7 192 aa11.08□□□□□ -0.64
PRKDC-207ENST00000536483 TSPEARQ8WU66 669 aa11.08□□□□□ -0.64
PRKDC-207ENST00000536483 SLC38A5Q8WUX1 472 aa11.08□□□□□ -0.64
PRKDC-207ENST00000536483 DYDC1Q8WWB3 177 aa11.08□□□□□ -0.64
PRKDC-207ENST00000536483 SLC35B4Q969S0 331 aa11.08□□□□□ -0.64
PRKDC-207ENST00000536483 CCT8L2Q96SF2 557 aa11.08□□□□□ -0.64
PRKDC-207ENST00000536483 TACO1Q9BSH4 297 aaKnown RBP11.08□□□□□ -0.64
PRKDC-207ENST00000536483 PRRG4Q9BZD6 226 aa11.08□□□□□ -0.64
PRKDC-207ENST00000536483 KLHL4Q9C0H6 718 aa11.08□□□□□ -0.64
PRKDC-207ENST00000536483 NSRP1Q9H0G5 558 aaKnown RBP11.08□□□□□ -0.64
PRKDC-207ENST00000536483 RAD21L1Q9H4I0 556 aa11.08□□□□□ -0.64
PRKDC-207ENST00000536483 RABEP2Q9H5N1 569 aa11.08□□□□□ -0.64
PRKDC-207ENST00000536483 BCO1Q9HAY6 547 aa11.08□□□□□ -0.64
PRKDC-207ENST00000536483 SERINC1Q9NRX5 453 aa11.08□□□□□ -0.64
PRKDC-207ENST00000536483 P2RX2Q9UBL9 471 aa11.08□□□□□ -0.64
PRKDC-207ENST00000536483 PROCRQ9UNN8 238 aa11.08□□□□□ -0.64
PRKDC-207ENST00000536483 EMC9Q9Y3B6 208 aa11.08□□□□□ -0.64
PRKDC-207ENST00000536483 ANK3Q12955 4377 aaKnown RBP11.07□□□□□ -0.64
PRKDC-207ENST00000536483 USF3Q68DE3 2245 aa11.07□□□□□ -0.64
PRKDC-207ENST00000536483 A0A0G2JPF8 293 aa11.07□□□□□ -0.64
PRKDC-207ENST00000536483 A0A1W2PP18 115 aa11.07□□□□□ -0.64
PRKDC-207ENST00000536483 HNRNPCL2B2RXH8 293 aa11.07□□□□□ -0.64
PRKDC-207ENST00000536483 HNRNPCL3B7ZW38 293 aa11.07□□□□□ -0.64
PRKDC-207ENST00000536483 CLIC1O00299 241 aa11.07□□□□□ -0.64
PRKDC-207ENST00000536483 DNPH1O43598 174 aa11.07□□□□□ -0.64
PRKDC-207ENST00000536483 HNRNPCL1O60812 293 aaKnown RBP11.07□□□□□ -0.64
PRKDC-207ENST00000536483 PRKD3O94806 890 aa11.07□□□□□ -0.64
PRKDC-207ENST00000536483 CNOT4O95628 575 aaKnown RBP11.07□□□□□ -0.64
PRKDC-207ENST00000536483 OPN1LWP04000 364 aa11.07□□□□□ -0.64
PRKDC-207ENST00000536483 HNRNPCL4P0DMR1 293 aa11.07□□□□□ -0.64
PRKDC-207ENST00000536483 NR2F1P10589 423 aa11.07□□□□□ -0.64
PRKDC-207ENST00000536483 ETFAP13804 333 aa11.07□□□□□ -0.64
PRKDC-207ENST00000536483 SFTPDP35247 375 aa11.07□□□□□ -0.64
PRKDC-207ENST00000536483 PTH2RP49190 550 aa11.07□□□□□ -0.64
PRKDC-207ENST00000536483 RNF144AP50876 292 aaPredicted RBP11.07□□□□□ -0.64
PRKDC-207ENST00000536483 CRISP3P54108 245 aa11.07□□□□□ -0.64
PRKDC-207ENST00000536483 PPP2R2BQ00005 443 aa11.07□□□□□ -0.64
PRKDC-207ENST00000536483 PDK3Q15120 406 aa11.07□□□□□ -0.64
PRKDC-207ENST00000536483 GTDC1Q4AE62 458 aa11.07□□□□□ -0.64
PRKDC-207ENST00000536483 RNF220Q5VTB9 566 aa11.07□□□□□ -0.64
PRKDC-207ENST00000536483 TMPPEQ6ZT21 453 aa11.07□□□□□ -0.64
PRKDC-207ENST00000536483 ADGRG3Q86Y34 549 aa11.07□□□□□ -0.64
PRKDC-207ENST00000536483 ZNF440Q8IYI8 595 aa11.07□□□□□ -0.64
PRKDC-207ENST00000536483 CNOT9Q92600 299 aaKnown RBP11.07□□□□□ -0.64
PRKDC-207ENST00000536483 SPDL1Q96EA4 605 aa11.07□□□□□ -0.64
PRKDC-207ENST00000536483 SRXN1Q9BYN0 137 aa11.07□□□□□ -0.64
PRKDC-207ENST00000536483 GSX2Q9BZM3 304 aa11.07□□□□□ -0.64
PRKDC-207ENST00000536483 ADAM19Q9H013 955 aa11.07□□□□□ -0.64
PRKDC-207ENST00000536483 QRSL1Q9H0R6 528 aaKnown RBP11.07□□□□□ -0.64
PRKDC-207ENST00000536483 TMEM185BQ9H7F4 350 aa11.07□□□□□ -0.64
PRKDC-207ENST00000536483 A4GALTQ9NPC4 353 aa11.07□□□□□ -0.64
PRKDC-207ENST00000536483 SLC25A37Q9NYZ2 338 aa11.07□□□□□ -0.64
PRKDC-207ENST00000536483 KLHL13Q9P2N7 655 aa11.07□□□□□ -0.64
PRKDC-207ENST00000536483 ING1Q9UK53 422 aaPredicted RBP11.07□□□□□ -0.64
PRKDC-207ENST00000536483 TRAPPC4Q9Y296 219 aa11.07□□□□□ -0.64
PRKDC-207ENST00000536483 HDGFL3Q9Y3E1 203 aa11.07□□□□□ -0.64
PRKDC-207ENST00000536483 HEATR5AQ86XA9 2040 aa11.06□□□□□ -0.64
PRKDC-207ENST00000536483 FBN3Q75N90 2809 aa11.06□□□□□ -0.64
PRKDC-207ENST00000536483 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.06□□□□□ -0.64
PRKDC-207ENST00000536483 CDHR4A6H8M9 788 aa11.06□□□□□ -0.64
PRKDC-207ENST00000536483 CLDN24A6NM45 220 aa11.06□□□□□ -0.64
PRKDC-207ENST00000536483 ZNF208O43345 1280 aa11.06□□□□□ -0.64
PRKDC-207ENST00000536483 CYTIPO60759 359 aa11.06□□□□□ -0.64
PRKDC-207ENST00000536483 ANP32DO95626 131 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms