RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 PRAMEF8Q5VWM4 474 aa11.73□□□□□ -0.53
PRKDC-206ENST00000536429 PRAMEF7Q5VXH5 474 aa11.73□□□□□ -0.53
PRKDC-206ENST00000536429 TMPPEQ6ZT21 453 aa11.73□□□□□ -0.53
PRKDC-206ENST00000536429 C22orf34Q6ZV56 151 aa11.73□□□□□ -0.53
PRKDC-206ENST00000536429 VPS13CQ709C8 3753 aa11.73□□□□□ -0.53
PRKDC-206ENST00000536429 PTOV1Q86YD1 416 aa11.73□□□□□ -0.53
PRKDC-206ENST00000536429 BBS10Q8TAM1 723 aa11.73□□□□□ -0.53
PRKDC-206ENST00000536429 FAM222BQ8WU58 562 aa11.73□□□□□ -0.53
PRKDC-206ENST00000536429 ZNF775Q96BV0 537 aaPredicted RBP11.73□□□□□ -0.53
PRKDC-206ENST00000536429 ANKRD27Q96NW4 1050 aa11.73□□□□□ -0.53
PRKDC-206ENST00000536429 CGREF1Q99674 301 aa11.73□□□□□ -0.53
PRKDC-206ENST00000536429 SLC39A3Q9BRY0 314 aa11.73□□□□□ -0.53
PRKDC-206ENST00000536429 SPATA9Q9BWV2 254 aa11.73□□□□□ -0.53
PRKDC-206ENST00000536429 TIGARQ9NQ88 270 aa11.73□□□□□ -0.53
PRKDC-206ENST00000536429 PLSCR4Q9NRQ2 329 aa11.73□□□□□ -0.53
PRKDC-206ENST00000536429 SERINC1Q9NRX5 453 aa11.73□□□□□ -0.53
PRKDC-206ENST00000536429 TMED7Q9Y3B3 224 aa11.73□□□□□ -0.53
PRKDC-206ENST00000536429 MPDZO75970 2070 aa11.72□□□□□ -0.53
PRKDC-206ENST00000536429 SH3D21A4FU49 640 aa11.72□□□□□ -0.53
PRKDC-206ENST00000536429 TMEM247A6NEH6 219 aa11.72□□□□□ -0.53
PRKDC-206ENST00000536429 A6NNC1 897 aa11.72□□□□□ -0.53
PRKDC-206ENST00000536429 FAAHO00519 579 aa11.72□□□□□ -0.53
PRKDC-206ENST00000536429 ATP8B1O43520 1251 aa11.72□□□□□ -0.53
PRKDC-206ENST00000536429 TPST1O60507 370 aa11.72□□□□□ -0.53
PRKDC-206ENST00000536429 RAMP1O60894 148 aa11.72□□□□□ -0.53
PRKDC-206ENST00000536429 EPXP11678 715 aa11.72□□□□□ -0.53
PRKDC-206ENST00000536429 IMPDH2P12268 514 aa11.72□□□□□ -0.53
PRKDC-206ENST00000536429 POU2F1P14859 743 aa11.72□□□□□ -0.53
PRKDC-206ENST00000536429 PPIBP23284 216 aaKnown RBP11.72□□□□□ -0.53
PRKDC-206ENST00000536429 AQP1P29972 269 aa11.72□□□□□ -0.53
PRKDC-206ENST00000536429 UGT2B10P36537 528 aa11.72□□□□□ -0.53
PRKDC-206ENST00000536429 CD79BP40259 229 aa11.72□□□□□ -0.53
PRKDC-206ENST00000536429 PEX19P40855 299 aa11.72□□□□□ -0.53
PRKDC-206ENST00000536429 POLR2HP52434 150 aaKnown RBP11.72□□□□□ -0.53
PRKDC-206ENST00000536429 SCARB2Q14108 478 aa11.72□□□□□ -0.53
PRKDC-206ENST00000536429 LARS2Q15031 903 aaKnown RBP11.72□□□□□ -0.53
PRKDC-206ENST00000536429 GLIPR1L2Q4G1C9 344 aa11.72□□□□□ -0.53
PRKDC-206ENST00000536429 ANKRD34AQ69YU3 496 aa11.72□□□□□ -0.53
PRKDC-206ENST00000536429 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.72□□□□□ -0.53
PRKDC-206ENST00000536429 ZNF550Q7Z398 422 aa11.72□□□□□ -0.53
PRKDC-206ENST00000536429 CADM2Q8N3J6 435 aa11.72□□□□□ -0.53
PRKDC-206ENST00000536429 TSPEARQ8WU66 669 aa11.72□□□□□ -0.53
PRKDC-206ENST00000536429 SLC25A43Q8WUT9 341 aaPredicted RBP11.72□□□□□ -0.53
PRKDC-206ENST00000536429 C10orf82Q8WW14 230 aa11.72□□□□□ -0.53
PRKDC-206ENST00000536429 REXO5Q96IC2 774 aaKnown RBP11.72□□□□□ -0.53
PRKDC-206ENST00000536429 WFIKKN1Q96NZ8 548 aa11.72□□□□□ -0.53
PRKDC-206ENST00000536429 ZNF300Q96RE9 604 aaPredicted RBP11.72□□□□□ -0.53
PRKDC-206ENST00000536429 PSD2Q9BQI7 771 aa11.72□□□□□ -0.53
PRKDC-206ENST00000536429 WFDC6Q9BQY6 131 aa11.72□□□□□ -0.53
PRKDC-206ENST00000536429 ADAM19Q9H013 955 aa11.72□□□□□ -0.53
PRKDC-206ENST00000536429 TMEM38AQ9H6F2 299 aa11.72□□□□□ -0.53
PRKDC-206ENST00000536429 SLC24A3Q9HC58 644 aa11.72□□□□□ -0.53
PRKDC-206ENST00000536429 RASSF1Q9NS23 344 aa11.72□□□□□ -0.53
PRKDC-206ENST00000536429 KLHL28Q9NXS3 571 aa11.72□□□□□ -0.53
PRKDC-206ENST00000536429 KLHL13Q9P2N7 655 aa11.72□□□□□ -0.53
PRKDC-206ENST00000536429 IFT52Q9Y366 437 aa11.72□□□□□ -0.53
PRKDC-206ENST00000536429 TESMINQ9Y4I5 508 aa11.72□□□□□ -0.53
PRKDC-206ENST00000536429 EVPLLA8MZ36 301 aa11.71□□□□□ -0.53
PRKDC-206ENST00000536429 FXYD1O00168 92 aa11.71□□□□□ -0.53
PRKDC-206ENST00000536429 SULT2B1O00204 365 aa11.71□□□□□ -0.53
PRKDC-206ENST00000536429 CYTIPO60759 359 aa11.71□□□□□ -0.53
PRKDC-206ENST00000536429 PRKD3O94806 890 aa11.71□□□□□ -0.53
PRKDC-206ENST00000536429 ETS2P15036 469 aa11.71□□□□□ -0.53
PRKDC-206ENST00000536429 KCNJ5P48544 419 aa11.71□□□□□ -0.53
PRKDC-206ENST00000536429 BNIP2Q12982 314 aa11.71□□□□□ -0.53
PRKDC-206ENST00000536429 DAZAP2Q15038 168 aaPredicted RBP11.71□□□□□ -0.53
PRKDC-206ENST00000536429 RNPS1Q15287 305 aaKnown RBP11.71□□□□□ -0.53
PRKDC-206ENST00000536429 POU4F3Q15319 338 aa11.71□□□□□ -0.53
PRKDC-206ENST00000536429 REEP3Q6NUK4 255 aa11.71□□□□□ -0.53
PRKDC-206ENST00000536429 TFAP2EQ6VUC0 442 aa11.71□□□□□ -0.53
PRKDC-206ENST00000536429 ZNF440Q8IYI8 595 aa11.71□□□□□ -0.53
PRKDC-206ENST00000536429 PRR14Q9BWN1 585 aa11.71□□□□□ -0.53
PRKDC-206ENST00000536429 KLHL4Q9C0H6 718 aa11.71□□□□□ -0.53
PRKDC-206ENST00000536429 LIME1Q9H400 295 aa11.71□□□□□ -0.53
PRKDC-206ENST00000536429 GLRX2Q9NS18 164 aa11.71□□□□□ -0.53
PRKDC-206ENST00000536429 ARMCX1Q9P291 453 aa11.71□□□□□ -0.53
PRKDC-206ENST00000536429 KLHL14Q9P2G3 628 aa11.71□□□□□ -0.53
PRKDC-206ENST00000536429 ZNF232Q9UNY5 417 aa11.71□□□□□ -0.53
PRKDC-206ENST00000536429 SPIN1Q9Y657 262 aaPredicted RBP11.71□□□□□ -0.53
PRKDC-206ENST00000536429 LOC100653049A0A140TA62 436 aa11.7□□□□□ -0.54
PRKDC-206ENST00000536429 A0A1W2PPR1 153 aa11.7□□□□□ -0.54
PRKDC-206ENST00000536429 SIAH2O43255 324 aa11.7□□□□□ -0.54
PRKDC-206ENST00000536429 GCM2O75603 506 aaPredicted RBP11.7□□□□□ -0.54
PRKDC-206ENST00000536429 KRT34O76011 436 aa11.7□□□□□ -0.54
PRKDC-206ENST00000536429 YES1P07947 543 aa11.7□□□□□ -0.54
PRKDC-206ENST00000536429 SLC6A2P23975 617 aa11.7□□□□□ -0.54
PRKDC-206ENST00000536429 HTR2AP28223 471 aa11.7□□□□□ -0.54
PRKDC-206ENST00000536429 PRKAR1BP31321 381 aa11.7□□□□□ -0.54
PRKDC-206ENST00000536429 HTR3AP46098 478 aa11.7□□□□□ -0.54
PRKDC-206ENST00000536429 GZMMP51124 257 aa11.7□□□□□ -0.54
PRKDC-206ENST00000536429 PCBP3P57721 371 aaKnown RBP11.7□□□□□ -0.54
PRKDC-206ENST00000536429 OR2B6P58173 313 aa11.7□□□□□ -0.54
PRKDC-206ENST00000536429 DMTNQ08495 405 aa11.7□□□□□ -0.54
PRKDC-206ENST00000536429 RASGEF1BQ0VAM2 473 aa11.7□□□□□ -0.54
PRKDC-206ENST00000536429 RABL3Q5HYI8 236 aa11.7□□□□□ -0.54
PRKDC-206ENST00000536429 TMEM201Q5SNT2 666 aa11.7□□□□□ -0.54
PRKDC-206ENST00000536429 REP15Q6BDI9 236 aa11.7□□□□□ -0.54
PRKDC-206ENST00000536429 GTF2IRD2BQ6EKJ0 949 aa11.7□□□□□ -0.54
PRKDC-206ENST00000536429 ABLIM2Q6H8Q1 611 aa11.7□□□□□ -0.54
PRKDC-206ENST00000536429 STAC2Q6ZMT1 411 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms