RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 YES1P07947 543 aa12.69□□□□□ -0.38
UBE3B-206ENST00000536398 PABPC4LP0CB38 370 aaKnown RBP12.69□□□□□ -0.38
UBE3B-206ENST00000536398 PCYT1AP49585 367 aa12.69□□□□□ -0.38
UBE3B-206ENST00000536398 IST1P53990 364 aa12.69□□□□□ -0.38
UBE3B-206ENST00000536398 HOXC5Q00444 222 aa12.69□□□□□ -0.38
UBE3B-206ENST00000536398 TESK1Q15569 626 aa12.69□□□□□ -0.38
UBE3B-206ENST00000536398 TSC22D1Q15714 1073 aa12.69□□□□□ -0.38
UBE3B-206ENST00000536398 LIN52Q52LA3 116 aa12.69□□□□□ -0.38
UBE3B-206ENST00000536398 TMEM201Q5SNT2 666 aa12.69□□□□□ -0.38
UBE3B-206ENST00000536398 CGB2Q6NT52 195 aa12.69□□□□□ -0.38
UBE3B-206ENST00000536398 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.69□□□□□ -0.38
UBE3B-206ENST00000536398 RETREG3Q86VR2 466 aa12.69□□□□□ -0.38
UBE3B-206ENST00000536398 COMTD1Q86VU5 262 aa12.69□□□□□ -0.38
UBE3B-206ENST00000536398 NFKBIDQ8NI38 313 aa12.69□□□□□ -0.38
UBE3B-206ENST00000536398 MED18Q9BUE0 208 aa12.69□□□□□ -0.38
UBE3B-206ENST00000536398 TMEM120AQ9BXJ8 343 aa12.69□□□□□ -0.38
UBE3B-206ENST00000536398 PLEKHF2Q9H8W4 249 aa12.69□□□□□ -0.38
UBE3B-206ENST00000536398 BCL2L10Q9HD36 194 aa12.69□□□□□ -0.38
UBE3B-206ENST00000536398 CCM2LQ9NUG4 571 aaPredicted RBP12.69□□□□□ -0.38
UBE3B-206ENST00000536398 THUMPD1Q9NXG2 353 aaKnown RBP12.69□□□□□ -0.38
UBE3B-206ENST00000536398 PLEKHA6Q9Y2H5 1048 aa12.69□□□□□ -0.38
UBE3B-206ENST00000536398 ABCA4P78363 2273 aa12.68□□□□□ -0.38
UBE3B-206ENST00000536398 DEFB108AA8MXU0 73 aa12.68□□□□□ -0.38
UBE3B-206ENST00000536398 CASKO14936 926 aa12.68□□□□□ -0.38
UBE3B-206ENST00000536398 CYTIPO60759 359 aa12.68□□□□□ -0.38
UBE3B-206ENST00000536398 RAMP1O60894 148 aa12.68□□□□□ -0.38
UBE3B-206ENST00000536398 PGM3O95394 542 aa12.68□□□□□ -0.38
UBE3B-206ENST00000536398 IMPDH2P12268 514 aa12.68□□□□□ -0.38
UBE3B-206ENST00000536398 SLC1A3P43003 542 aa12.68□□□□□ -0.38
UBE3B-206ENST00000536398 POLR2HP52434 150 aaKnown RBP12.68□□□□□ -0.38
UBE3B-206ENST00000536398 RASGEF1BQ0VAM2 473 aa12.68□□□□□ -0.38
UBE3B-206ENST00000536398 BNIP2Q12982 314 aa12.68□□□□□ -0.38
UBE3B-206ENST00000536398 FADDQ13158 208 aa12.68□□□□□ -0.38
UBE3B-206ENST00000536398 SELPLGQ14242 412 aa12.68□□□□□ -0.38
UBE3B-206ENST00000536398 RUNDC3AQ59EK9 446 aa12.68□□□□□ -0.38
UBE3B-206ENST00000536398 ZNF311Q5JNZ3 666 aa12.68□□□□□ -0.38
UBE3B-206ENST00000536398 GCNT6Q5T4J0 391 aa12.68□□□□□ -0.38
UBE3B-206ENST00000536398 TFAP2EQ6VUC0 442 aa12.68□□□□□ -0.38
UBE3B-206ENST00000536398 SERPINA11Q86U17 422 aa12.68□□□□□ -0.38
UBE3B-206ENST00000536398 CXorf67Q86X51 503 aaPredicted RBP12.68□□□□□ -0.38
UBE3B-206ENST00000536398 CCDC103Q8IW40 242 aa12.68□□□□□ -0.38
UBE3B-206ENST00000536398 SLC43A2Q8N370 569 aa12.68□□□□□ -0.38
UBE3B-206ENST00000536398 CADM2Q8N3J6 435 aa12.68□□□□□ -0.38
UBE3B-206ENST00000536398 SLC25A43Q8WUT9 341 aaPredicted RBP12.68□□□□□ -0.38
UBE3B-206ENST00000536398 STON2Q8WXE9 905 aa12.68□□□□□ -0.38
UBE3B-206ENST00000536398 CPPED1Q9BRF8 314 aaPredicted RBP12.68□□□□□ -0.38
UBE3B-206ENST00000536398 ADAM19Q9H013 955 aa12.68□□□□□ -0.38
UBE3B-206ENST00000536398 RAD21L1Q9H4I0 556 aa12.68□□□□□ -0.38
UBE3B-206ENST00000536398 BCO1Q9HAY6 547 aa12.68□□□□□ -0.38
UBE3B-206ENST00000536398 FGFR1OP2Q9NVK5 253 aa12.68□□□□□ -0.38
UBE3B-206ENST00000536398 TMEM45AQ9NWC5 275 aa12.68□□□□□ -0.38
UBE3B-206ENST00000536398 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.68□□□□□ -0.38
UBE3B-206ENST00000536398 PRSS50Q9UI38 385 aa12.68□□□□□ -0.38
UBE3B-206ENST00000536398 ST6GALNAC2Q9UJ37 374 aa12.68□□□□□ -0.38
UBE3B-206ENST00000536398 TMEM247A6NEH6 219 aa12.67□□□□□ -0.38
UBE3B-206ENST00000536398 FAAHO00519 579 aa12.67□□□□□ -0.38
UBE3B-206ENST00000536398 GCM2O75603 506 aaPredicted RBP12.67□□□□□ -0.38
UBE3B-206ENST00000536398 PMS2P2O95744 297 aa12.67□□□□□ -0.38
UBE3B-206ENST00000536398 THBS1P07996 1170 aa12.67□□□□□ -0.38
UBE3B-206ENST00000536398 ARAFP10398 606 aa12.67□□□□□ -0.38
UBE3B-206ENST00000536398 NTF4P34130 210 aa12.67□□□□□ -0.38
UBE3B-206ENST00000536398 HTR3AP46098 478 aa12.67□□□□□ -0.38
UBE3B-206ENST00000536398 OR2B6P58173 313 aa12.67□□□□□ -0.38
UBE3B-206ENST00000536398 CSNK2A1P68400 391 aaPredicted RBP12.67□□□□□ -0.38
UBE3B-206ENST00000536398 CDK6Q00534 326 aa12.67□□□□□ -0.38
UBE3B-206ENST00000536398 GUCY1A3Q02108 690 aa12.67□□□□□ -0.38
UBE3B-206ENST00000536398 LARS2Q15031 903 aaKnown RBP12.67□□□□□ -0.38
UBE3B-206ENST00000536398 ADRM1Q16186 407 aa12.67□□□□□ -0.38
UBE3B-206ENST00000536398 RNF220Q5VTB9 566 aa12.67□□□□□ -0.38
UBE3B-206ENST00000536398 BEND4Q6ZU67 534 aa12.67□□□□□ -0.38
UBE3B-206ENST00000536398 MTDHQ86UE4 582 aaKnown RBP12.67□□□□□ -0.38
UBE3B-206ENST00000536398 GABRG1Q8N1C3 465 aa12.67□□□□□ -0.38
UBE3B-206ENST00000536398 PIK3IP1Q96FE7 263 aa12.67□□□□□ -0.38
UBE3B-206ENST00000536398 SPATA9Q9BWV2 254 aa12.67□□□□□ -0.38
UBE3B-206ENST00000536398 RABEP2Q9H5N1 569 aa12.67□□□□□ -0.38
UBE3B-206ENST00000536398 KLHL9Q9P2J3 617 aa12.67□□□□□ -0.38
UBE3B-206ENST00000536398 LEF1Q9UJU2 399 aaPredicted RBP12.67□□□□□ -0.38
UBE3B-206ENST00000536398 ZNF232Q9UNY5 417 aa12.67□□□□□ -0.38
UBE3B-206ENST00000536398 TRIM33Q9UPN9 1127 aa12.67□□□□□ -0.38
UBE3B-206ENST00000536398 SPIN1Q9Y657 262 aaPredicted RBP12.67□□□□□ -0.38
UBE3B-206ENST00000536398 GMEB1Q9Y692 573 aa12.67□□□□□ -0.38
UBE3B-206ENST00000536398 CELSR1Q9NYQ6 3014 aa12.67□□□□□ -0.38
UBE3B-206ENST00000536398 VPS13CQ709C8 3753 aa12.67□□□□□ -0.38
UBE3B-206ENST00000536398 ANKRD17O75179 2603 aaKnown RBP12.66□□□□□ -0.38
UBE3B-206ENST00000536398 C5orf58C9J3I9 102 aa12.66□□□□□ -0.38
UBE3B-206ENST00000536398 TPST1O60507 370 aa12.66□□□□□ -0.38
UBE3B-206ENST00000536398 ADAP00813 363 aa12.66□□□□□ -0.38
UBE3B-206ENST00000536398 GPX2P18283 190 aa12.66□□□□□ -0.38
UBE3B-206ENST00000536398 CRYGSP22914 178 aa12.66□□□□□ -0.38
UBE3B-206ENST00000536398 LOXP28300 417 aaPredicted RBP12.66□□□□□ -0.38
UBE3B-206ENST00000536398 ART1P52961 327 aa12.66□□□□□ -0.38
UBE3B-206ENST00000536398 IRX1P78414 480 aaPredicted RBP12.66□□□□□ -0.38
UBE3B-206ENST00000536398 GLIPR1L2Q4G1C9 344 aa12.66□□□□□ -0.38
UBE3B-206ENST00000536398 PRAMEF8Q5VWM4 474 aa12.66□□□□□ -0.38
UBE3B-206ENST00000536398 PRAMEF7Q5VXH5 474 aa12.66□□□□□ -0.38
UBE3B-206ENST00000536398 ABLIM2Q6H8Q1 611 aa12.66□□□□□ -0.38
UBE3B-206ENST00000536398 DHDDSQ86SQ9 333 aa12.66□□□□□ -0.38
UBE3B-206ENST00000536398 STK32CQ86UX6 486 aa12.66□□□□□ -0.38
UBE3B-206ENST00000536398 ZNF440Q8IYI8 595 aa12.66□□□□□ -0.38
UBE3B-206ENST00000536398 BBS10Q8TAM1 723 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms