RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 YIPF2Q9BWQ6 316 aa14.76□□□□□ -0.05
CHMP1A-202ENST00000535997 MFRPQ9BY79 579 aa14.76□□□□□ -0.05
CHMP1A-202ENST00000535997 CAPN10Q9HC96 672 aa14.76□□□□□ -0.05
CHMP1A-202ENST00000535997 CD93Q9NPY3 652 aa14.76□□□□□ -0.05
CHMP1A-202ENST00000535997 KLHL1Q9NR64 748 aa14.76□□□□□ -0.05
CHMP1A-202ENST00000535997 CHRNA9Q9UGM1 479 aa14.76□□□□□ -0.05
CHMP1A-202ENST00000535997 ST6GALNAC2Q9UJ37 374 aa14.76□□□□□ -0.05
CHMP1A-202ENST00000535997 HS3ST3A1Q9Y663 406 aa14.76□□□□□ -0.05
CHMP1A-202ENST00000535997 CACNG2Q9Y698 323 aa14.76□□□□□ -0.05
CHMP1A-202ENST00000535997 OR5K4A6NMS3 321 aa14.76□□□□□ -0.05
CHMP1A-202ENST00000535997 ALX3O95076 343 aa14.76□□□□□ -0.05
CHMP1A-202ENST00000535997 NDUFB2O95178 105 aa14.76□□□□□ -0.05
CHMP1A-202ENST00000535997 TNFP01375 233 aa14.76□□□□□ -0.05
CHMP1A-202ENST00000535997 EMDP50402 254 aa14.76□□□□□ -0.05
CHMP1A-202ENST00000535997 UBE2IP63279 158 aaKnown RBP14.76□□□□□ -0.05
CHMP1A-202ENST00000535997 SLC25A35Q3KQZ1 300 aa14.76□□□□□ -0.05
CHMP1A-202ENST00000535997 C9orf50Q5SZB4 431 aa14.76□□□□□ -0.05
CHMP1A-202ENST00000535997 ZC3H14Q6PJT7 736 aaKnown RBP14.76□□□□□ -0.05
CHMP1A-202ENST00000535997 SSX6Q7RTT6 188 aa14.76□□□□□ -0.05
CHMP1A-202ENST00000535997 THAP4Q8WY91 577 aa14.76□□□□□ -0.05
CHMP1A-202ENST00000535997 SLX1AQ9BQ83 275 aa14.76□□□□□ -0.05
CHMP1A-202ENST00000535997 CCDC3Q9BQI4 270 aa14.76□□□□□ -0.05
CHMP1A-202ENST00000535997 ABRACLQ9P1F3 81 aa14.76□□□□□ -0.05
CHMP1A-202ENST00000535997 NOTOA8MTQ0 251 aa14.75□□□□□ -0.05
CHMP1A-202ENST00000535997 EEF1E1O43324 174 aaKnown RBP14.75□□□□□ -0.05
CHMP1A-202ENST00000535997 ARL6IP5O75915 188 aa14.75□□□□□ -0.05
CHMP1A-202ENST00000535997 DHFRP00374 187 aa14.75□□□□□ -0.05
CHMP1A-202ENST00000535997 CD1AP06126 327 aa14.75□□□□□ -0.05
CHMP1A-202ENST00000535997 TPMTP51580 245 aa14.75□□□□□ -0.05
CHMP1A-202ENST00000535997 GBX2P52951 348 aaPredicted RBP14.75□□□□□ -0.05
CHMP1A-202ENST00000535997 MRPL28Q13084 256 aaKnown RBP14.75□□□□□ -0.05
CHMP1A-202ENST00000535997 ZNF141Q15928 474 aa14.75□□□□□ -0.05
CHMP1A-202ENST00000535997 SNAP47Q5SQN1 464 aa14.75□□□□□ -0.05
CHMP1A-202ENST00000535997 KIAA1324Q6UXG2 1013 aaKnown RBP14.75□□□□□ -0.05
CHMP1A-202ENST00000535997 SMIM19Q96E16 107 aa14.75□□□□□ -0.05
CHMP1A-202ENST00000535997 RBM18Q96H35 190 aaKnown RBP14.75□□□□□ -0.05
CHMP1A-202ENST00000535997 PEX11GQ96HA9 241 aa14.75□□□□□ -0.05
CHMP1A-202ENST00000535997 NDEL1Q9GZM8 345 aa14.75□□□□□ -0.05
CHMP1A-202ENST00000535997 GALNT9Q9HCQ5 603 aa14.75□□□□□ -0.05
CHMP1A-202ENST00000535997 STARD5Q9NSY2 213 aa14.75□□□□□ -0.05
CHMP1A-202ENST00000535997 TICRRQ7Z2Z1 1910 aa14.75□□□□□ -0.05
CHMP1A-202ENST00000535997 KIR2DS5A0A0G2JLQ3 304 aa14.75□□□□□ -0.05
CHMP1A-202ENST00000535997 A0A0G2JNG1 304 aa14.75□□□□□ -0.05
CHMP1A-202ENST00000535997 KIR2DS3K7RE56 304 aa14.75□□□□□ -0.05
CHMP1A-202ENST00000535997 RDH16O75452 317 aa14.75□□□□□ -0.05
CHMP1A-202ENST00000535997 GATBO75879 557 aaKnown RBP14.75□□□□□ -0.05
CHMP1A-202ENST00000535997 UBL3O95164 117 aa14.75□□□□□ -0.05
CHMP1A-202ENST00000535997 HIST1H1CP16403 213 aaKnown RBP14.75□□□□□ -0.05
CHMP1A-202ENST00000535997 ZNF24P17028 368 aa14.75□□□□□ -0.05
CHMP1A-202ENST00000535997 SIRPAP78324 504 aa14.75□□□□□ -0.05
CHMP1A-202ENST00000535997 PITPNAQ00169 270 aa14.75□□□□□ -0.05
CHMP1A-202ENST00000535997 GGTLC2Q14390 218 aa14.75□□□□□ -0.05
CHMP1A-202ENST00000535997 KIR2DS5Q14953 304 aa14.75□□□□□ -0.05
CHMP1A-202ENST00000535997 NTRK2Q16620 822 aa14.75□□□□□ -0.05
CHMP1A-202ENST00000535997 SLC36A2Q495M3 483 aa14.75□□□□□ -0.05
CHMP1A-202ENST00000535997 FAM98AQ8NCA5 519 aaKnown RBP14.75□□□□□ -0.05
CHMP1A-202ENST00000535997 OR4N2Q8NGD1 307 aa14.75□□□□□ -0.05
CHMP1A-202ENST00000535997 RIT1Q92963 219 aa14.75□□□□□ -0.05
CHMP1A-202ENST00000535997 PBX4Q9BYU1 374 aa14.75□□□□□ -0.05
CHMP1A-202ENST00000535997 A0A1B0GVC2 190 aa14.74□□□□□ -0.05
CHMP1A-202ENST00000535997 A6NIN4 97 aa14.74□□□□□ -0.05
CHMP1A-202ENST00000535997 CPNE3O75131 537 aaKnown RBP14.74□□□□□ -0.05
CHMP1A-202ENST00000535997 IGKV1D-16P01601 117 aa14.74□□□□□ -0.05
CHMP1A-202ENST00000535997 EPXP11678 715 aa14.74□□□□□ -0.05
CHMP1A-202ENST00000535997 EN2P19622 333 aaPredicted RBP14.74□□□□□ -0.05
CHMP1A-202ENST00000535997 PBX2P40425 430 aa14.74□□□□□ -0.05
CHMP1A-202ENST00000535997 MMP15P51511 669 aa14.74□□□□□ -0.05
CHMP1A-202ENST00000535997 MRPS21P82921 87 aaKnown RBP14.74□□□□□ -0.05
CHMP1A-202ENST00000535997 FGFBP1Q14512 234 aa14.74□□□□□ -0.05
CHMP1A-202ENST00000535997 PON3Q15166 354 aa14.74□□□□□ -0.05
CHMP1A-202ENST00000535997 KRT74Q7RTS7 529 aa14.74□□□□□ -0.05
CHMP1A-202ENST00000535997 OOSP2Q86WS3 158 aa14.74□□□□□ -0.05
CHMP1A-202ENST00000535997 DNAJC5GQ8N7S2 189 aa14.74□□□□□ -0.05
CHMP1A-202ENST00000535997 DTX3Q8N9I9 347 aa14.74□□□□□ -0.05
CHMP1A-202ENST00000535997 OR4K13Q8NH42 304 aa14.74□□□□□ -0.05
CHMP1A-202ENST00000535997 DEDD2Q8WXF8 326 aa14.74□□□□□ -0.05
CHMP1A-202ENST00000535997 ZMYND19Q96E35 227 aaPredicted RBP14.74□□□□□ -0.05
CHMP1A-202ENST00000535997 PELI1Q96FA3 418 aa14.74□□□□□ -0.05
CHMP1A-202ENST00000535997 HYLS1Q96M11 299 aa14.74□□□□□ -0.05
CHMP1A-202ENST00000535997 CNN2Q99439 309 aaKnown RBP14.74□□□□□ -0.05
CHMP1A-202ENST00000535997 GSDMCQ9BYG8 508 aa14.74□□□□□ -0.05
CHMP1A-202ENST00000535997 MKKSQ9NPJ1 570 aaPredicted RBP14.74□□□□□ -0.05
CHMP1A-202ENST00000535997 RPS6KB2Q9UBS0 482 aa14.74□□□□□ -0.05
CHMP1A-202ENST00000535997 ICAM5Q9UMF0 924 aa14.74□□□□□ -0.05
CHMP1A-202ENST00000535997 A0A0A6YYJ9 748 aa14.73□□□□□ -0.05
CHMP1A-202ENST00000535997 A0A1W2PRG6 482 aa14.73□□□□□ -0.05
CHMP1A-202ENST00000535997 ZNF780AO75290 641 aaPredicted RBP14.73□□□□□ -0.05
CHMP1A-202ENST00000535997 TFP02787 698 aa14.73□□□□□ -0.05
CHMP1A-202ENST00000535997 GPR143P51810 404 aa14.73□□□□□ -0.05
CHMP1A-202ENST00000535997 HCCSP53701 268 aa14.73□□□□□ -0.05
CHMP1A-202ENST00000535997 LGALS3BPQ08380 585 aa14.73□□□□□ -0.05
CHMP1A-202ENST00000535997 CDK5R1Q15078 307 aa14.73□□□□□ -0.05
CHMP1A-202ENST00000535997 CDONQ4KMG0 1287 aa14.73□□□□□ -0.05
CHMP1A-202ENST00000535997 CCDC58Q4VC31 144 aa14.73□□□□□ -0.05
CHMP1A-202ENST00000535997 TP53I3Q53FA7 332 aa14.73□□□□□ -0.05
CHMP1A-202ENST00000535997 RPL22L1Q6P5R6 122 aaKnown RBP14.73□□□□□ -0.05
CHMP1A-202ENST00000535997 CMIPQ8IY22 773 aa14.73□□□□□ -0.05
CHMP1A-202ENST00000535997 CADM2Q8N3J6 435 aa14.73□□□□□ -0.05
CHMP1A-202ENST00000535997 OR9A4Q8NGU2 314 aa14.73□□□□□ -0.05
CHMP1A-202ENST00000535997 VSTM2LQ96N03 204 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms