RNA–Protein interactions for RNA: ENST00000534636.5

CTSB-233, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-233ENST00000534636 SCN2BO60939 215 aa16.32■□□□□ 0.2
CTSB-233ENST00000534636 UQCRBP14927 111 aa16.32■□□□□ 0.2
CTSB-233ENST00000534636 BGNP21810 368 aa16.32■□□□□ 0.2
CTSB-233ENST00000534636 CDKN1AP38936 164 aa16.32■□□□□ 0.2
CTSB-233ENST00000534636 HTR3AP46098 478 aa16.32■□□□□ 0.2
CTSB-233ENST00000534636 KCNJ10P78508 379 aa16.32■□□□□ 0.2
CTSB-233ENST00000534636 TXNL4AP83876 142 aaKnown RBP16.32■□□□□ 0.2
CTSB-233ENST00000534636 FUT5Q11128 374 aa16.32■□□□□ 0.2
CTSB-233ENST00000534636 CHD3Q12873 2000 aaKnown RBP16.32■□□□□ 0.2
CTSB-233ENST00000534636 STX3Q13277 289 aa16.32■□□□□ 0.2
CTSB-233ENST00000534636 GNA13Q14344 377 aa16.32■□□□□ 0.2
CTSB-233ENST00000534636 CASP8Q14790 479 aa16.32■□□□□ 0.2
CTSB-233ENST00000534636 FBXW9Q5XUX1 488 aa16.32■□□□□ 0.2
CTSB-233ENST00000534636 ATG4DQ86TL0 474 aaPredicted RBP16.32■□□□□ 0.2
CTSB-233ENST00000534636 CMIPQ8IY22 773 aa16.32■□□□□ 0.2
CTSB-233ENST00000534636 ZNF75CPQ92670 426 aaPredicted RBP16.32■□□□□ 0.2
CTSB-233ENST00000534636 RADILQ96JH8 1075 aa16.32■□□□□ 0.2
CTSB-233ENST00000534636 DNHD1Q96M86 4753 aa16.32■□□□□ 0.2
CTSB-233ENST00000534636 SORT1Q99523 831 aa16.32■□□□□ 0.2
CTSB-233ENST00000534636 PAIP2Q9BPZ3 127 aaKnown RBP16.32■□□□□ 0.2
CTSB-233ENST00000534636 SAP130Q9H0E3 1048 aa16.32■□□□□ 0.2
CTSB-233ENST00000534636 BARX1Q9HBU1 254 aaPredicted RBP16.32■□□□□ 0.2
CTSB-233ENST00000534636 KCNK9Q9NPC2 374 aa16.32■□□□□ 0.2
CTSB-233ENST00000534636 CISD1Q9NZ45 108 aaKnown RBP16.32■□□□□ 0.2
CTSB-233ENST00000534636 RNF223E7ERA6 249 aa16.31■□□□□ 0.2
CTSB-233ENST00000534636 MRPL33O75394 65 aaKnown RBP16.31■□□□□ 0.2
CTSB-233ENST00000534636 RAD51DO75771 328 aa16.31■□□□□ 0.2
CTSB-233ENST00000534636 TP53P04637 393 aaPredicted RBP16.31■□□□□ 0.2
CTSB-233ENST00000534636 MAGEA8P43361 318 aa16.31■□□□□ 0.2
CTSB-233ENST00000534636 CLK1P49759 484 aaKnown RBP16.31■□□□□ 0.2
CTSB-233ENST00000534636 DMTNQ08495 405 aa16.31■□□□□ 0.2
CTSB-233ENST00000534636 LRRC74AQ0VAA2 488 aa16.31■□□□□ 0.2
CTSB-233ENST00000534636 KLHL17Q6TDP4 642 aa16.31■□□□□ 0.2
CTSB-233ENST00000534636 SEZ6L2Q6UXD5 910 aa16.31■□□□□ 0.2
CTSB-233ENST00000534636 TMEM108Q6UXF1 575 aa16.31■□□□□ 0.2
CTSB-233ENST00000534636 DNAJC14Q6Y2X3 702 aaPredicted RBP16.31■□□□□ 0.2
CTSB-233ENST00000534636 RNF130Q86XS8 419 aa16.31■□□□□ 0.2
CTSB-233ENST00000534636 ZNF433Q8N7K0 673 aaPredicted RBP16.31■□□□□ 0.2
CTSB-233ENST00000534636 DDIT4LQ96D03 193 aa16.31■□□□□ 0.2
CTSB-233ENST00000534636 DNAJA3Q96EY1 480 aa16.31■□□□□ 0.2
CTSB-233ENST00000534636 CCDC115Q96NT0 180 aa16.31■□□□□ 0.2
CTSB-233ENST00000534636 PANX1Q96RD7 426 aa16.31■□□□□ 0.2
CTSB-233ENST00000534636 ZBTB18Q99592 522 aa16.31■□□□□ 0.2
CTSB-233ENST00000534636 MEAF6Q9HAF1 191 aa16.31■□□□□ 0.2
CTSB-233ENST00000534636 ASB6Q9NWX5 421 aa16.31■□□□□ 0.2
CTSB-233ENST00000534636 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.31■□□□□ 0.23e-7■■□□□ 13.2
CTSB-233ENST00000534636 BTNL2Q9UIR0 455 aa16.31■□□□□ 0.2
CTSB-233ENST00000534636 HAO1Q9UJM8 370 aa16.31■□□□□ 0.2
CTSB-233ENST00000534636 POU2F3Q9UKI9 436 aa16.31■□□□□ 0.2
CTSB-233ENST00000534636 MGAT4BQ9UQ53 548 aa16.31■□□□□ 0.2
CTSB-233ENST00000534636 V9GYY5 206 aaPredicted RBP16.31■□□□□ 0.2
CTSB-233ENST00000534636 HEATR1Q9H583 2144 aaKnown RBP16.31■□□□□ 0.2
CTSB-233ENST00000534636 ATRQ13535 2644 aa16.3■□□□□ 0.2
CTSB-233ENST00000534636 HMGN4O00479 90 aa16.3■□□□□ 0.2
CTSB-233ENST00000534636 BCAS1O75363 584 aaPredicted RBP16.3■□□□□ 0.2
CTSB-233ENST00000534636 IGHV3-9P01782 118 aa16.3■□□□□ 0.2
CTSB-233ENST00000534636 DHRS4L1P0CG22 281 aa16.3■□□□□ 0.2
CTSB-233ENST00000534636 EDNRAP25101 427 aa16.3■□□□□ 0.2
CTSB-233ENST00000534636 IDH2P48735 452 aaKnown RBP16.3■□□□□ 0.2
CTSB-233ENST00000534636 NME5P56597 212 aa16.3■□□□□ 0.2
CTSB-233ENST00000534636 OR2B6P58173 313 aa16.3■□□□□ 0.2
CTSB-233ENST00000534636 PHC1P78364 1004 aa16.3■□□□□ 0.2
CTSB-233ENST00000534636 CHRNEQ04844 493 aa16.3■□□□□ 0.2
CTSB-233ENST00000534636 PGGHGQ32M88 737 aa16.3■□□□□ 0.2
CTSB-233ENST00000534636 CEP85LQ5SZL2 805 aa16.3■□□□□ 0.2
CTSB-233ENST00000534636 AGAP6Q5VW22 663 aa16.3■□□□□ 0.2
CTSB-233ENST00000534636 OGFOD2Q6N063 350 aa16.3■□□□□ 0.2
CTSB-233ENST00000534636 HMGN2P46Q86SG4 172 aa16.3■□□□□ 0.2
CTSB-233ENST00000534636 PIAS4Q8N2W9 510 aaPredicted RBP16.3■□□□□ 0.2
CTSB-233ENST00000534636 ARL5BQ96KC2 179 aa16.3■□□□□ 0.2
CTSB-233ENST00000534636 TRNT1Q96Q11 434 aaKnown RBP16.3■□□□□ 0.2
CTSB-233ENST00000534636 TRAF4Q9BUZ4 470 aaPredicted RBP16.3■□□□□ 0.2
CTSB-233ENST00000534636 OR11A1Q9GZK7 315 aa16.3■□□□□ 0.2
CTSB-233ENST00000534636 C20orf27Q9GZN8 174 aa16.3■□□□□ 0.2
CTSB-233ENST00000534636 SLCO5A1Q9H2Y9 848 aa16.3■□□□□ 0.2
CTSB-233ENST00000534636 TAS2R16Q9NYV7 291 aa16.3■□□□□ 0.2
CTSB-233ENST00000534636 CR1P17927 2039 aa16.29■□□□□ 0.2
CTSB-233ENST00000534636 CCDC154A6NI56 674 aa16.29■□□□□ 0.2
CTSB-233ENST00000534636 ZNF716A6NP11 495 aa16.29■□□□□ 0.2
CTSB-233ENST00000534636 SHISA9B4DS77 424 aa16.29■□□□□ 0.2
CTSB-233ENST00000534636 EIF1BO60739 113 aaKnown RBP16.29■□□□□ 0.2
CTSB-233ENST00000534636 RAMP1O60894 148 aa16.29■□□□□ 0.2
CTSB-233ENST00000534636 PGM3O95394 542 aa16.29■□□□□ 0.2
CTSB-233ENST00000534636 CCNA2P20248 432 aa16.29■□□□□ 0.2
CTSB-233ENST00000534636 POLR2HP52434 150 aaKnown RBP16.29■□□□□ 0.2
CTSB-233ENST00000534636 SLC16A1P53985 500 aa16.29■□□□□ 0.2
CTSB-233ENST00000534636 NRF1Q16656 503 aa16.29■□□□□ 0.2
CTSB-233ENST00000534636 OR7E24Q6IFN5 339 aa16.29■□□□□ 0.2
CTSB-233ENST00000534636 CASP12Q6UXS9 341 aa16.29■□□□□ 0.2
CTSB-233ENST00000534636 CROCCP2Q86T23 111 aa16.29■□□□□ 0.2
CTSB-233ENST00000534636 PRIMA1Q86XR5 153 aa16.29■□□□□ 0.2
CTSB-233ENST00000534636 DEPDC4Q8N2C3 294 aa16.29■□□□□ 0.2
CTSB-233ENST00000534636 OR52N5Q8NH56 324 aa16.29■□□□□ 0.2
CTSB-233ENST00000534636 WDR60Q8WVS4 1066 aa16.29■□□□□ 0.2
CTSB-233ENST00000534636 OR52E6Q96RD3 313 aa16.29■□□□□ 0.2
CTSB-233ENST00000534636 NAA11Q9BSU3 229 aaPredicted RBP16.29■□□□□ 0.2
CTSB-233ENST00000534636 REG4Q9BYZ8 158 aa16.29■□□□□ 0.2
CTSB-233ENST00000534636 TMEM181Q9P2C4 612 aa16.29■□□□□ 0.2
CTSB-233ENST00000534636 MALT1Q9UDY8 824 aa16.29■□□□□ 0.2
CTSB-233ENST00000534636 TRAPPC4Q9Y296 219 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms