RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 FKBP14Q9NWM8 211 aa16.33■□□□□ 0.2
PHRF1-205ENST00000533464 CDK5RAP2Q96SN8 1893 aa16.33■□□□□ 0.2
PHRF1-205ENST00000533464 CRTAPO75718 401 aaPredicted RBP16.33■□□□□ 0.2
PHRF1-205ENST00000533464 TSPAN12O95859 305 aa16.33■□□□□ 0.2
PHRF1-205ENST00000533464 GNMTQ14749 295 aa16.33■□□□□ 0.2
PHRF1-205ENST00000533464 IL20RBQ6UXL0 311 aa16.33■□□□□ 0.2
PHRF1-205ENST00000533464 SLC37A2Q8TED4 501 aa16.33■□□□□ 0.2
PHRF1-205ENST00000533464 ADAMTS14Q8WXS8 1223 aa16.33■□□□□ 0.2
PHRF1-205ENST00000533464 MS4A6EQ96DS6 147 aa16.33■□□□□ 0.2
PHRF1-205ENST00000533464 FXYD1O00168 92 aa16.32■□□□□ 0.2
PHRF1-205ENST00000533464 GABRA5P31644 462 aa16.32■□□□□ 0.2
PHRF1-205ENST00000533464 IDUAP35475 653 aa16.32■□□□□ 0.2
PHRF1-205ENST00000533464 TMEM244Q5VVB8 128 aa16.32■□□□□ 0.2
PHRF1-205ENST00000533464 FN3KQ9H479 309 aa16.32■□□□□ 0.2
PHRF1-205ENST00000533464 IKZF5Q9H5V7 419 aa16.32■□□□□ 0.2
PHRF1-205ENST00000533464 ELOVL3Q9HB03 270 aa16.32■□□□□ 0.2
PHRF1-205ENST00000533464 KCNS2Q9ULS6 477 aa16.32■□□□□ 0.2
PHRF1-205ENST00000533464 LOC102723532A0A0G2JNH3 316 aa16.32■□□□□ 0.2
PHRF1-205ENST00000533464 NCR1O76036 304 aa16.32■□□□□ 0.2
PHRF1-205ENST00000533464 DIRAS3O95661 229 aa16.32■□□□□ 0.2
PHRF1-205ENST00000533464 BMP4P12644 408 aa16.32■□□□□ 0.2
PHRF1-205ENST00000533464 AGTR1P30556 359 aa16.32■□□□□ 0.2
PHRF1-205ENST00000533464 AQP2P41181 271 aa16.32■□□□□ 0.2
PHRF1-205ENST00000533464 GDF7Q7Z4P5 450 aa16.32■□□□□ 0.2
PHRF1-205ENST00000533464 DUSP19Q8WTR2 217 aa16.32■□□□□ 0.2
PHRF1-205ENST00000533464 SLCO4A1Q96BD0 722 aa16.32■□□□□ 0.2
PHRF1-205ENST00000533464 HTR3BO95264 441 aa16.32■□□□□ 0.2
PHRF1-205ENST00000533464 ZNF35P13682 527 aa16.32■□□□□ 0.2
PHRF1-205ENST00000533464 UQCRC1P31930 480 aa16.32■□□□□ 0.2
PHRF1-205ENST00000533464 RPS25P62851 125 aaKnown RBP16.32■□□□□ 0.2
PHRF1-205ENST00000533464 CRMP1Q14194 572 aa16.32■□□□□ 0.2
PHRF1-205ENST00000533464 LRRC28Q86X40 367 aaPredicted RBP16.32■□□□□ 0.2
PHRF1-205ENST00000533464 ASB12Q8WXK4 309 aa16.32■□□□□ 0.2
PHRF1-205ENST00000533464 SLC6A18Q96N87 628 aa16.32■□□□□ 0.2
PHRF1-205ENST00000533464 NT5DC2Q9H857 520 aa16.32■□□□□ 0.2
PHRF1-205ENST00000533464 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.32■□□□□ 0.2
PHRF1-205ENST00000533464 MEIOCA2RUB1 952 aa16.32■□□□□ 0.2
PHRF1-205ENST00000533464 SCG5P05408 212 aa16.32■□□□□ 0.2
PHRF1-205ENST00000533464 OR8G3PP0DMU2 310 aa16.32■□□□□ 0.2
PHRF1-205ENST00000533464 ISL1P61371 349 aa16.32■□□□□ 0.2
PHRF1-205ENST00000533464 FGL1Q08830 312 aa16.32■□□□□ 0.2
PHRF1-205ENST00000533464 HYAL4Q2M3T9 481 aa16.32■□□□□ 0.2
PHRF1-205ENST00000533464 OR14A16Q8NHC5 309 aa16.32■□□□□ 0.2
PHRF1-205ENST00000533464 MCOLN1Q9GZU1 580 aa16.32■□□□□ 0.2
PHRF1-205ENST00000533464 FGF21Q9NSA1 209 aa16.32■□□□□ 0.2
PHRF1-205ENST00000533464 SNX11Q9Y5W9 270 aa16.32■□□□□ 0.2
PHRF1-205ENST00000533464 BORCS7-ASMTA0A0B4J1R7 106 aa16.32■□□□□ 0.2
PHRF1-205ENST00000533464 TMEM269A0A1B0GVZ9 245 aa16.32■□□□□ 0.2
PHRF1-205ENST00000533464 GALR3O60755 368 aaPredicted RBP16.32■□□□□ 0.2
PHRF1-205ENST00000533464 ARSBP15848 533 aa16.32■□□□□ 0.2
PHRF1-205ENST00000533464 FGFBP1Q14512 234 aa16.32■□□□□ 0.2
PHRF1-205ENST00000533464 PLK5Q496M5 336 aa16.32■□□□□ 0.2
PHRF1-205ENST00000533464 CFAP77Q6ZQR2 320 aa16.32■□□□□ 0.2
PHRF1-205ENST00000533464 DEDD2Q8WXF8 326 aa16.32■□□□□ 0.2
PHRF1-205ENST00000533464 SPHK1Q9NYA1 384 aa16.32■□□□□ 0.2
PHRF1-205ENST00000533464 ICKQ9UPZ9 632 aa16.32■□□□□ 0.2
PHRF1-205ENST00000533464 MEIS3P1A6NDR6 274 aa16.31■□□□□ 0.2
PHRF1-205ENST00000533464 SEC14L2O76054 403 aa16.31■□□□□ 0.2
PHRF1-205ENST00000533464 RAB3AP20336 220 aa16.31■□□□□ 0.2
PHRF1-205ENST00000533464 CSNK1A1P48729 337 aa16.31■□□□□ 0.2
PHRF1-205ENST00000533464 CSNK2A1P68400 391 aaPredicted RBP16.31■□□□□ 0.2
PHRF1-205ENST00000533464 EEF1A2Q05639 463 aaKnown RBP16.31■□□□□ 0.2
PHRF1-205ENST00000533464 DUSP6Q16828 381 aa16.31■□□□□ 0.2
PHRF1-205ENST00000533464 RPL22L1Q6P5R6 122 aaKnown RBP16.31■□□□□ 0.2
PHRF1-205ENST00000533464 ARSKQ6UWY0 536 aa16.31■□□□□ 0.2
PHRF1-205ENST00000533464 MED25Q71SY5 747 aa16.31■□□□□ 0.2
PHRF1-205ENST00000533464 ABHD12BQ7Z5M8 362 aaPredicted RBP16.31■□□□□ 0.2
PHRF1-205ENST00000533464 TECPR1Q7Z6L1 1165 aa16.31■□□□□ 0.2
PHRF1-205ENST00000533464 SLC35F3Q8IY50 421 aa16.31■□□□□ 0.2
PHRF1-205ENST00000533464 CSNK2A3Q8NEV1 391 aa16.31■□□□□ 0.2
PHRF1-205ENST00000533464 SLC7A13Q8TCU3 470 aa16.31■□□□□ 0.2
PHRF1-205ENST00000533464 MSANTD3Q96H12 275 aa16.31■□□□□ 0.2
PHRF1-205ENST00000533464 COQ10AQ96MF6 247 aa16.31■□□□□ 0.2
PHRF1-205ENST00000533464 MICAL3Q7RTP6 2002 aa16.31■□□□□ 0.2
PHRF1-205ENST00000533464 H7C1C5 153 aa16.31■□□□□ 0.2
PHRF1-205ENST00000533464 SCRG1O75711 98 aa16.31■□□□□ 0.2
PHRF1-205ENST00000533464 MMP11P24347 488 aa16.31■□□□□ 0.2
PHRF1-205ENST00000533464 LCN6P62502 163 aa16.31■□□□□ 0.2
PHRF1-205ENST00000533464 NXNL2Q5VZ03 156 aa16.31■□□□□ 0.2
PHRF1-205ENST00000533464 KIAA1211LQ6NV74 962 aa16.31■□□□□ 0.2
PHRF1-205ENST00000533464 LIMS2Q7Z4I7 341 aa16.31■□□□□ 0.2
PHRF1-205ENST00000533464 OR51T1Q8NGJ9 327 aa16.31■□□□□ 0.2
PHRF1-205ENST00000533464 CNOT9Q92600 299 aaKnown RBP16.31■□□□□ 0.2
PHRF1-205ENST00000533464 ELSPBP1Q96BH3 223 aa16.31■□□□□ 0.2
PHRF1-205ENST00000533464 NUBP2Q9Y5Y2 271 aa16.31■□□□□ 0.2
PHRF1-205ENST00000533464 HMX3A6NHT5 357 aa16.31■□□□□ 0.2
PHRF1-205ENST00000533464 ARPC1BO15143 372 aaKnown RBP16.31■□□□□ 0.2
PHRF1-205ENST00000533464 TMPRSS11DO60235 418 aa16.31■□□□□ 0.2
PHRF1-205ENST00000533464 HTR2BP41595 481 aa16.31■□□□□ 0.2
PHRF1-205ENST00000533464 VASPP50552 380 aaPredicted RBP16.31■□□□□ 0.2
PHRF1-205ENST00000533464 UBE2NP61088 152 aaKnown RBP16.31■□□□□ 0.2
PHRF1-205ENST00000533464 ARL6IP1Q15041 203 aa16.31■□□□□ 0.2
PHRF1-205ENST00000533464 ZNF385BQ569K4 471 aa16.31■□□□□ 0.2
PHRF1-205ENST00000533464 NKAIN2Q5VXU1 208 aa16.31■□□□□ 0.2
PHRF1-205ENST00000533464 SLX4IPQ5VYV7 408 aa16.31■□□□□ 0.2
PHRF1-205ENST00000533464 BHLHA9Q7RTU4 235 aa16.31■□□□□ 0.2
PHRF1-205ENST00000533464 EID2Q8N6I1 236 aa16.31■□□□□ 0.2
PHRF1-205ENST00000533464 HLA-CQ95604 372 aa16.31■□□□□ 0.2
PHRF1-205ENST00000533464 TMEM72A0PK05 275 aa16.31■□□□□ 0.2
PHRF1-205ENST00000533464 NAP1L6A6NFF2 107 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms