RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 DTNAQ9Y4J8 743 aa6.76□□□□□ -1.33
NXF1-215ENST00000533440 RYR3Q15413 4870 aa6.75□□□□□ -1.33
NXF1-215ENST00000533440 CCDC151A5D8V7 595 aa6.75□□□□□ -1.33
NXF1-215ENST00000533440 LYNX1G3V0Z9 82 aa6.75□□□□□ -1.33
NXF1-215ENST00000533440 hCG_2039718K7EN88 272 aa6.75□□□□□ -1.33
NXF1-215ENST00000533440 KLF11O14901 512 aa6.75□□□□□ -1.33
NXF1-215ENST00000533440 RAD51CO43502 376 aa6.75□□□□□ -1.33
NXF1-215ENST00000533440 URI1O94763 535 aaPredicted RBP6.75□□□□□ -1.33
NXF1-215ENST00000533440 CRYAAP02489 173 aa6.75□□□□□ -1.33
NXF1-215ENST00000533440 HMGN2P05204 90 aaKnown RBP6.75□□□□□ -1.33
NXF1-215ENST00000533440 ERCC1P07992 297 aaPredicted RBP6.75□□□□□ -1.33
NXF1-215ENST00000533440 MSMBP08118 114 aa6.75□□□□□ -1.33
NXF1-215ENST00000533440 LYNX1P0DP58 116 aa6.75□□□□□ -1.33
NXF1-215ENST00000533440 HKR1P10072 659 aa6.75□□□□□ -1.33
NXF1-215ENST00000533440 DDX5P17844 614 aaKnown RBP6.75□□□□□ -1.33
NXF1-215ENST00000533440 IMPDH1P20839 514 aa6.75□□□□□ -1.33
NXF1-215ENST00000533440 ATP6V1C1P21283 382 aa6.75□□□□□ -1.33
NXF1-215ENST00000533440 PAX7P23759 505 aa6.75□□□□□ -1.33
NXF1-215ENST00000533440 SLC1A3P43003 542 aa6.75□□□□□ -1.33
NXF1-215ENST00000533440 MAGEA8P43361 318 aa6.75□□□□□ -1.33
NXF1-215ENST00000533440 FOXA1P55317 472 aa6.75□□□□□ -1.33
NXF1-215ENST00000533440 SESN3P58005 492 aa6.75□□□□□ -1.33
NXF1-215ENST00000533440 H3F3AP84243 136 aa6.75□□□□□ -1.33
NXF1-215ENST00000533440 NAAAQ02083 359 aa6.75□□□□□ -1.33
NXF1-215ENST00000533440 POU3F1Q03052 451 aaPredicted RBP6.75□□□□□ -1.33
NXF1-215ENST00000533440 CAV1Q03135 178 aa6.75□□□□□ -1.33
NXF1-215ENST00000533440 MERTKQ12866 999 aa6.75□□□□□ -1.33
NXF1-215ENST00000533440 FOXL1Q12952 345 aa6.75□□□□□ -1.33
NXF1-215ENST00000533440 LCP2Q13094 533 aa6.75□□□□□ -1.33
NXF1-215ENST00000533440 LASP1Q14847 261 aaKnown RBP6.75□□□□□ -1.33
NXF1-215ENST00000533440 KIAA0040Q15053 153 aa6.75□□□□□ -1.33
NXF1-215ENST00000533440 C3orf36Q3SXR2 165 aa6.75□□□□□ -1.33
NXF1-215ENST00000533440 HIKESHIQ53FT3 197 aa6.75□□□□□ -1.33
NXF1-215ENST00000533440 ANKRD26P1Q6NSI1 321 aa6.75□□□□□ -1.33
NXF1-215ENST00000533440 CDC73Q6P1J9 531 aa6.75□□□□□ -1.33
NXF1-215ENST00000533440 ANKRD16Q6P6B7 361 aa6.75□□□□□ -1.33
NXF1-215ENST00000533440 SHQ1Q6PI26 577 aaKnown RBP6.75□□□□□ -1.33
NXF1-215ENST00000533440 KLHL24Q6TFL4 600 aa6.75□□□□□ -1.33
NXF1-215ENST00000533440 ZDHHC24Q6UX98 284 aa6.75□□□□□ -1.33
NXF1-215ENST00000533440 CASP12Q6UXS9 341 aa6.75□□□□□ -1.33
NXF1-215ENST00000533440 SZRD1Q7Z422 152 aa6.75□□□□□ -1.33
NXF1-215ENST00000533440 TRIM46Q7Z4K8 759 aa6.75□□□□□ -1.33
NXF1-215ENST00000533440 CCDC103Q8IW40 242 aa6.75□□□□□ -1.33
NXF1-215ENST00000533440 TEX29Q8N6K0 151 aa6.75□□□□□ -1.33
NXF1-215ENST00000533440 NUP37Q8NFH4 326 aa6.75□□□□□ -1.33
NXF1-215ENST00000533440 OR4F15Q8NGB8 312 aa6.75□□□□□ -1.33
NXF1-215ENST00000533440 CLDND2Q8NHS1 167 aa6.75□□□□□ -1.33
NXF1-215ENST00000533440 RFWD2Q8NHY2 731 aa6.75□□□□□ -1.33
NXF1-215ENST00000533440 JADE3Q92613 823 aa6.75□□□□□ -1.33
NXF1-215ENST00000533440 MRPL24Q96A35 216 aaKnown RBP6.75□□□□□ -1.33
NXF1-215ENST00000533440 ZHX1-C8orf76Q96EF9 292 aa6.75□□□□□ -1.33
NXF1-215ENST00000533440 FAM120BQ96EK7 910 aaKnown RBP6.75□□□□□ -1.33
NXF1-215ENST00000533440 METTL2AQ96IZ6 378 aaKnown RBP6.75□□□□□ -1.33
NXF1-215ENST00000533440 ARL5BQ96KC2 179 aa6.75□□□□□ -1.33
NXF1-215ENST00000533440 LRRC37BQ96QE4 947 aa6.75□□□□□ -1.33
NXF1-215ENST00000533440 KCNS3Q9BQ31 491 aa6.75□□□□□ -1.33
NXF1-215ENST00000533440 SUCNR1Q9BXA5 334 aa6.75□□□□□ -1.33
NXF1-215ENST00000533440 LAT2Q9GZY6 243 aa6.75□□□□□ -1.33
NXF1-215ENST00000533440 CDC42EP4Q9H3Q1 356 aaKnown RBP6.75□□□□□ -1.33
NXF1-215ENST00000533440 ZNF442Q9H7R0 627 aa6.75□□□□□ -1.33
NXF1-215ENST00000533440 SIRT3Q9NTG7 399 aaPredicted RBP6.75□□□□□ -1.33
NXF1-215ENST00000533440 ACER3Q9NUN7 267 aa6.75□□□□□ -1.33
NXF1-215ENST00000533440 PARPBPQ9NWS1 579 aa6.75□□□□□ -1.33
NXF1-215ENST00000533440 STK38LQ9Y2H1 464 aa6.75□□□□□ -1.33
NXF1-215ENST00000533440 HDGFL3Q9Y3E1 203 aa6.75□□□□□ -1.33
NXF1-215ENST00000533440 FLVCR1Q9Y5Y0 555 aa6.75□□□□□ -1.33
NXF1-215ENST00000533440 NOTCH1P46531 2555 aa6.75□□□□□ -1.33
NXF1-215ENST00000533440 RSL1D1O76021 490 aaKnown RBP6.74□□□□□ -1.33
NXF1-215ENST00000533440 PNPP00491 289 aa6.74□□□□□ -1.33
NXF1-215ENST00000533440 AVPP01185 164 aa6.74□□□□□ -1.33
NXF1-215ENST00000533440 IGLV1-44P01699 117 aa6.74□□□□□ -1.33
NXF1-215ENST00000533440 TFP02787 698 aa6.74□□□□□ -1.33
NXF1-215ENST00000533440 CECR9P0C854 216 aa6.74□□□□□ -1.33
NXF1-215ENST00000533440 ARAFP10398 606 aa6.74□□□□□ -1.33
NXF1-215ENST00000533440 UBL4AP11441 157 aa6.74□□□□□ -1.33
NXF1-215ENST00000533440 TAC1P20366 129 aa6.74□□□□□ -1.33
NXF1-215ENST00000533440 CALCRP30988 508 aa6.74□□□□□ -1.33
NXF1-215ENST00000533440 THBS4P35443 961 aa6.74□□□□□ -1.33
NXF1-215ENST00000533440 APOBEC1P41238 236 aaKnown RBP6.74□□□□□ -1.33
NXF1-215ENST00000533440 PAFAH1B1P43034 410 aa6.74□□□□□ -1.33
NXF1-215ENST00000533440 ASMTP46597 345 aa6.74□□□□□ -1.33
NXF1-215ENST00000533440 CLK1P49759 484 aaKnown RBP6.74□□□□□ -1.33
NXF1-215ENST00000533440 CCR4P51679 360 aa6.74□□□□□ -1.33
NXF1-215ENST00000533440 UBA52P62987 128 aaKnown RBP6.74□□□□□ -1.33
NXF1-215ENST00000533440 HGFACQ04756 655 aa6.74□□□□□ -1.33
NXF1-215ENST00000533440 SKP2Q13309 424 aa6.74□□□□□ -1.33
NXF1-215ENST00000533440 PDE7AQ13946 482 aa6.74□□□□□ -1.33
NXF1-215ENST00000533440 SLC17A1Q14916 467 aa6.74□□□□□ -1.33
NXF1-215ENST00000533440 ADRM1Q16186 407 aa6.74□□□□□ -1.33
NXF1-215ENST00000533440 OCLNQ16625 522 aa6.74□□□□□ -1.33
NXF1-215ENST00000533440 IMPG1Q17R60 797 aa6.74□□□□□ -1.33
NXF1-215ENST00000533440 TUSC1Q2TAM9 212 aa6.74□□□□□ -1.33
NXF1-215ENST00000533440 DCST2Q5T1A1 773 aa6.74□□□□□ -1.33
NXF1-215ENST00000533440 HIST2H2BDQ6DRA6 164 aa6.74□□□□□ -1.33
NXF1-215ENST00000533440 VHLLQ6RSH7 139 aa6.74□□□□□ -1.33
NXF1-215ENST00000533440 TMCO5AQ8N6Q1 288 aa6.74□□□□□ -1.33
NXF1-215ENST00000533440 ZNF614Q8N883 585 aa6.74□□□□□ -1.33
NXF1-215ENST00000533440 OR51F2Q8NH61 342 aa6.74□□□□□ -1.33
NXF1-215ENST00000533440 TMEM234Q8WY98 164 aa6.74□□□□□ -1.33
NXF1-215ENST00000533440 L3HYPDHQ96EM0 354 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms