RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 TRIM3O75382 744 aaPredicted RBP10.17□□□□□ -0.78
TRAPPC4-213ENST00000533149 H6PDO95479 791 aa10.17□□□□□ -0.78
TRAPPC4-213ENST00000533149 ANPEPP15144 967 aa10.17□□□□□ -0.78
TRAPPC4-213ENST00000533149 CRYBA2P53672 197 aa10.17□□□□□ -0.78
TRAPPC4-213ENST00000533149 CRISP3P54108 245 aa10.17□□□□□ -0.78
TRAPPC4-213ENST00000533149 POU6F2P78424 691 aaPredicted RBP10.17□□□□□ -0.78
TRAPPC4-213ENST00000533149 CHRNEQ04844 493 aa10.17□□□□□ -0.78
TRAPPC4-213ENST00000533149 CHRNB3Q05901 458 aa10.17□□□□□ -0.78
TRAPPC4-213ENST00000533149 FAM27E3Q08E93 113 aa10.17□□□□□ -0.78
TRAPPC4-213ENST00000533149 ZNHIT3Q15649 155 aaPredicted RBP10.17□□□□□ -0.78
TRAPPC4-213ENST00000533149 ARHGAP11BQ3KRB8 267 aa10.17□□□□□ -0.78
TRAPPC4-213ENST00000533149 FAM98BQ52LJ0 330 aaKnown RBP10.17□□□□□ -0.78
TRAPPC4-213ENST00000533149 PRAMEF8Q5VWM4 474 aa10.17□□□□□ -0.78
TRAPPC4-213ENST00000533149 PRAMEF7Q5VXH5 474 aa10.17□□□□□ -0.78
TRAPPC4-213ENST00000533149 ENPP6Q6UWR7 440 aa10.17□□□□□ -0.78
TRAPPC4-213ENST00000533149 NPSR1Q6W5P4 371 aa10.17□□□□□ -0.78
TRAPPC4-213ENST00000533149 LRRC74BQ6ZQY2 392 aa10.17□□□□□ -0.78
TRAPPC4-213ENST00000533149 COX18Q8N8Q8 333 aa10.17□□□□□ -0.78
TRAPPC4-213ENST00000533149 BBS10Q8TAM1 723 aa10.17□□□□□ -0.78
TRAPPC4-213ENST00000533149 FAM110BQ8TC76 370 aa10.17□□□□□ -0.78
TRAPPC4-213ENST00000533149 WNT2BQ93097 391 aa10.17□□□□□ -0.78
TRAPPC4-213ENST00000533149 ABTB1Q969K4 478 aaPredicted RBP10.17□□□□□ -0.78
TRAPPC4-213ENST00000533149 INTS12Q96CB8 462 aaKnown RBP10.17□□□□□ -0.78
TRAPPC4-213ENST00000533149 HS3ST6Q96QI5 342 aa10.17□□□□□ -0.78
TRAPPC4-213ENST00000533149 ZNF607Q96SK3 696 aa10.17□□□□□ -0.78
TRAPPC4-213ENST00000533149 SDF2Q99470 211 aa10.17□□□□□ -0.78
TRAPPC4-213ENST00000533149 CHID1Q9BWS9 393 aa10.17□□□□□ -0.78
TRAPPC4-213ENST00000533149 BTBD2Q9BX70 525 aa10.17□□□□□ -0.78
TRAPPC4-213ENST00000533149 BEX2Q9BXY8 128 aa10.17□□□□□ -0.78
TRAPPC4-213ENST00000533149 ITPAQ9BY32 194 aa10.17□□□□□ -0.78
TRAPPC4-213ENST00000533149 MTHFD2LQ9H903 347 aaPredicted RBP10.17□□□□□ -0.78
TRAPPC4-213ENST00000533149 ADPRHL2Q9NX46 363 aa10.17□□□□□ -0.78
TRAPPC4-213ENST00000533149 STX18Q9P2W9 335 aaKnown RBP10.17□□□□□ -0.78
TRAPPC4-213ENST00000533149 LPAR3Q9UBY5 353 aa10.17□□□□□ -0.78
TRAPPC4-213ENST00000533149 SAMD4AQ9UPU9 718 aaKnown RBP10.17□□□□□ -0.78
TRAPPC4-213ENST00000533149 SLC6A5Q9Y345 797 aa10.17□□□□□ -0.78
TRAPPC4-213ENST00000533149 CHCHD2Q9Y6H1 151 aaPredicted RBP10.17□□□□□ -0.78
TRAPPC4-213ENST00000533149 NCKAP5O14513 1909 aa10.17□□□□□ -0.78
TRAPPC4-213ENST00000533149 CUBNO60494 3623 aa10.16□□□□□ -0.78
TRAPPC4-213ENST00000533149 ANKRD33BA6NCL7 494 aa10.16□□□□□ -0.78
TRAPPC4-213ENST00000533149 TMEM229AB2RXF0 380 aa10.16□□□□□ -0.78
TRAPPC4-213ENST00000533149 FCMRO60667 390 aa10.16□□□□□ -0.78
TRAPPC4-213ENST00000533149 SERPINB7O75635 380 aa10.16□□□□□ -0.78
TRAPPC4-213ENST00000533149 MFN2O95140 757 aa10.16□□□□□ -0.78
TRAPPC4-213ENST00000533149 SNX4O95219 450 aa10.16□□□□□ -0.78
TRAPPC4-213ENST00000533149 ACTL6AO96019 429 aa10.16□□□□□ -0.78
TRAPPC4-213ENST00000533149 AK1P00568 194 aa10.16□□□□□ -0.78
TRAPPC4-213ENST00000533149 OPN1SWP03999 348 aa10.16□□□□□ -0.78
TRAPPC4-213ENST00000533149 CT45A8P0DMV1 189 aa10.16□□□□□ -0.78
TRAPPC4-213ENST00000533149 CT45A9P0DMV2 189 aa10.16□□□□□ -0.78
TRAPPC4-213ENST00000533149 ETS2P15036 469 aa10.16□□□□□ -0.78
TRAPPC4-213ENST00000533149 DRD5P21918 477 aa10.16□□□□□ -0.78
TRAPPC4-213ENST00000533149 PSMA4P25789 261 aaKnown RBP10.16□□□□□ -0.78
TRAPPC4-213ENST00000533149 GCKP35557 465 aa10.16□□□□□ -0.78
TRAPPC4-213ENST00000533149 CD79BP40259 229 aa10.16□□□□□ -0.78
TRAPPC4-213ENST00000533149 PPICP45877 212 aa10.16□□□□□ -0.78
TRAPPC4-213ENST00000533149 SELENOWP63302 87 aa10.16□□□□□ -0.78
TRAPPC4-213ENST00000533149 PSG6Q00889 435 aa10.16□□□□□ -0.78
TRAPPC4-213ENST00000533149 CT45A2Q5DJT8 189 aa10.16□□□□□ -0.78
TRAPPC4-213ENST00000533149 DCST2Q5T1A1 773 aa10.16□□□□□ -0.78
TRAPPC4-213ENST00000533149 CCNJQ5T5M9 372 aa10.16□□□□□ -0.78
TRAPPC4-213ENST00000533149 LYPD8Q6UX82 237 aa10.16□□□□□ -0.78
TRAPPC4-213ENST00000533149 FKBP9P1Q75LS8 142 aa10.16□□□□□ -0.78
TRAPPC4-213ENST00000533149 KRT73Q86Y46 540 aa10.16□□□□□ -0.78
TRAPPC4-213ENST00000533149 PAPD5Q8NDF8 572 aaKnown RBP10.16□□□□□ -0.78
TRAPPC4-213ENST00000533149 OR10G3Q8NGC4 313 aa10.16□□□□□ -0.78
TRAPPC4-213ENST00000533149 OR4N2Q8NGD1 307 aa10.16□□□□□ -0.78
TRAPPC4-213ENST00000533149 ROBO4Q8WZ75 1007 aa10.16□□□□□ -0.78
TRAPPC4-213ENST00000533149 ADIPOR1Q96A54 375 aa10.16□□□□□ -0.78
TRAPPC4-213ENST00000533149 ZG16BQ96DA0 208 aa10.16□□□□□ -0.78
TRAPPC4-213ENST00000533149 TRMT61AQ96FX7 289 aaKnown RBP10.16□□□□□ -0.78
TRAPPC4-213ENST00000533149 TPD52L3Q96J77 140 aa10.16□□□□□ -0.78
TRAPPC4-213ENST00000533149 RNF145Q96MT1 663 aa10.16□□□□□ -0.78
TRAPPC4-213ENST00000533149 DOCK7Q96N67 2140 aa10.16□□□□□ -0.78
TRAPPC4-213ENST00000533149 COL21A1Q96P44 957 aa10.16□□□□□ -0.78
TRAPPC4-213ENST00000533149 UCN2Q96RP3 112 aa10.16□□□□□ -0.78
TRAPPC4-213ENST00000533149 ANGPTL4Q9BY76 406 aa10.16□□□□□ -0.78
TRAPPC4-213ENST00000533149 SLC38A1Q9H2H9 487 aa10.16□□□□□ -0.78
TRAPPC4-213ENST00000533149 RASSF4Q9H2L5 321 aa10.16□□□□□ -0.78
TRAPPC4-213ENST00000533149 Q9N2J8 555 aa10.16□□□□□ -0.78
TRAPPC4-213ENST00000533149 ARMC1Q9NVT9 282 aa10.16□□□□□ -0.78
TRAPPC4-213ENST00000533149 FBXO34Q9NWN3 711 aa10.16□□□□□ -0.78
TRAPPC4-213ENST00000533149 CNOT11Q9UKZ1 510 aaKnown RBP10.16□□□□□ -0.78
TRAPPC4-213ENST00000533149 GPC6Q9Y625 555 aaPredicted RBP10.16□□□□□ -0.78
TRAPPC4-213ENST00000533149 ABCA1O95477 2261 aa10.16□□□□□ -0.78
TRAPPC4-213ENST00000533149 C2orf92A0A1B0GVN3 265 aa10.15□□□□□ -0.78
TRAPPC4-213ENST00000533149 OR6C76A6NM76 312 aa10.15□□□□□ -0.78
TRAPPC4-213ENST00000533149 STX11O75558 287 aa10.15□□□□□ -0.78
TRAPPC4-213ENST00000533149 TIPRLO75663 272 aa10.15□□□□□ -0.78
TRAPPC4-213ENST00000533149 KCNK2O95069 426 aa10.15□□□□□ -0.78
TRAPPC4-213ENST00000533149 FBXO45P0C2W1 286 aa10.15□□□□□ -0.78
TRAPPC4-213ENST00000533149 RAP2AP10114 183 aa10.15□□□□□ -0.78
TRAPPC4-213ENST00000533149 CPN1P15169 458 aa10.15□□□□□ -0.78
TRAPPC4-213ENST00000533149 CHMP24386 653 aa10.15□□□□□ -0.78
TRAPPC4-213ENST00000533149 LOXP28300 417 aaPredicted RBP10.15□□□□□ -0.78
TRAPPC4-213ENST00000533149 UGT2B10P36537 528 aa10.15□□□□□ -0.78
TRAPPC4-213ENST00000533149 HPCAP84074 193 aa10.15□□□□□ -0.78
TRAPPC4-213ENST00000533149 SLC34A1Q06495 639 aa10.15□□□□□ -0.78
TRAPPC4-213ENST00000533149 TOMM20Q15388 145 aa10.15□□□□□ -0.78
TRAPPC4-213ENST00000533149 CYP27C1Q4G0S4 372 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms