RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 PLSCR4Q9NRQ2 329 aa13.72□□□□□ -0.21
CPSF1-210ENST00000532935 ELOVL5Q9NYP7 299 aa13.72□□□□□ -0.21
CPSF1-210ENST00000532935 IFT52Q9Y366 437 aa13.72□□□□□ -0.21
CPSF1-210ENST00000532935 ABCA4P78363 2273 aa13.72□□□□□ -0.21
CPSF1-210ENST00000532935 TMED7-TICAM2A0A0A6YYA0 188 aa13.71□□□□□ -0.21
CPSF1-210ENST00000532935 IGHV3-15A0A0B4J1V0 119 aa13.71□□□□□ -0.21
CPSF1-210ENST00000532935 A6NNC1 897 aa13.71□□□□□ -0.21
CPSF1-210ENST00000532935 CTAG2O75638 210 aa13.71□□□□□ -0.21
CPSF1-210ENST00000532935 PRKD3O94806 890 aa13.71□□□□□ -0.21
CPSF1-210ENST00000532935 GKN3PP0CG01 181 aa13.71□□□□□ -0.21
CPSF1-210ENST00000532935 TFPIP10646 304 aa13.71□□□□□ -0.21
CPSF1-210ENST00000532935 POU2F1P14859 743 aa13.71□□□□□ -0.21
CPSF1-210ENST00000532935 DRD4P21917 467 aa13.71□□□□□ -0.21
CPSF1-210ENST00000532935 ENPP1P22413 925 aa13.71□□□□□ -0.21
CPSF1-210ENST00000532935 FKBP2P26885 142 aaKnown RBP13.71□□□□□ -0.21
CPSF1-210ENST00000532935 SLC1A3P43003 542 aa13.71□□□□□ -0.21
CPSF1-210ENST00000532935 DIO1P49895 249 aa13.71□□□□□ -0.21
CPSF1-210ENST00000532935 POLR2HP52434 150 aaKnown RBP13.71□□□□□ -0.21
CPSF1-210ENST00000532935 SEC24CP53992 1094 aa13.71□□□□□ -0.21
CPSF1-210ENST00000532935 DAZAP2Q15038 168 aaPredicted RBP13.71□□□□□ -0.21
CPSF1-210ENST00000532935 RUNDC3AQ59EK9 446 aa13.71□□□□□ -0.21
CPSF1-210ENST00000532935 ZNF311Q5JNZ3 666 aa13.71□□□□□ -0.21
CPSF1-210ENST00000532935 TMPPEQ6ZT21 453 aa13.71□□□□□ -0.21
CPSF1-210ENST00000532935 SLC43A2Q8N370 569 aa13.71□□□□□ -0.21
CPSF1-210ENST00000532935 GPATCH1Q9BRR8 931 aaKnown RBP13.71□□□□□ -0.21
CPSF1-210ENST00000532935 SPATA9Q9BWV2 254 aa13.71□□□□□ -0.21
CPSF1-210ENST00000532935 ARMC7Q9H6L4 198 aa13.71□□□□□ -0.21
CPSF1-210ENST00000532935 MRGBPQ9NV56 204 aa13.71□□□□□ -0.21
CPSF1-210ENST00000532935 OSGIN1Q9UJX0 560 aa13.71□□□□□ -0.21
CPSF1-210ENST00000532935 TMED7Q9Y3B3 224 aa13.71□□□□□ -0.21
CPSF1-210ENST00000532935 CHST2Q9Y4C5 530 aa13.71□□□□□ -0.21
CPSF1-210ENST00000532935 AKAP6Q13023 2319 aa13.71□□□□□ -0.21
CPSF1-210ENST00000532935 CCDC168Q8NDH2 2452 aa13.7□□□□□ -0.22
CPSF1-210ENST00000532935 FAM221AA4D161 298 aa13.7□□□□□ -0.22
CPSF1-210ENST00000532935 SH3D21A4FU49 640 aa13.7□□□□□ -0.22
CPSF1-210ENST00000532935 SULT2B1O00204 365 aa13.7□□□□□ -0.22
CPSF1-210ENST00000532935 SMAD9O15198 467 aaKnown RBP13.7□□□□□ -0.22
CPSF1-210ENST00000532935 ETS2P15036 469 aa13.7□□□□□ -0.22
CPSF1-210ENST00000532935 CCNA2P20248 432 aa13.7□□□□□ -0.22
CPSF1-210ENST00000532935 TACR3P29371 465 aa13.7□□□□□ -0.22
CPSF1-210ENST00000532935 ACAA2P42765 397 aaKnown RBP13.7□□□□□ -0.22
CPSF1-210ENST00000532935 KCNJ5P48544 419 aa13.7□□□□□ -0.22
CPSF1-210ENST00000532935 CLK1P49759 484 aaKnown RBP13.7□□□□□ -0.22
CPSF1-210ENST00000532935 CSNK2A1P68400 391 aaPredicted RBP13.7□□□□□ -0.22
CPSF1-210ENST00000532935 CDK6Q00534 326 aa13.7□□□□□ -0.22
CPSF1-210ENST00000532935 NFYCQ13952 458 aa13.7□□□□□ -0.22
CPSF1-210ENST00000532935 EXOC3L2Q2M3D2 409 aa13.7□□□□□ -0.22
CPSF1-210ENST00000532935 TMEM201Q5SNT2 666 aa13.7□□□□□ -0.22
CPSF1-210ENST00000532935 GKAP1Q5VSY0 366 aaPredicted RBP13.7□□□□□ -0.22
CPSF1-210ENST00000532935 REEP3Q6NUK4 255 aa13.7□□□□□ -0.22
CPSF1-210ENST00000532935 ZNF550Q7Z398 422 aa13.7□□□□□ -0.22
CPSF1-210ENST00000532935 TUSC5Q8IXB3 177 aa13.7□□□□□ -0.22
CPSF1-210ENST00000532935 ARL5BQ96KC2 179 aa13.7□□□□□ -0.22
CPSF1-210ENST00000532935 ANKRD27Q96NW4 1050 aa13.7□□□□□ -0.22
CPSF1-210ENST00000532935 DACH2Q96NX9 599 aa13.7□□□□□ -0.22
CPSF1-210ENST00000532935 CGREF1Q99674 301 aa13.7□□□□□ -0.22
CPSF1-210ENST00000532935 OR11A1Q9GZK7 315 aa13.7□□□□□ -0.22
CPSF1-210ENST00000532935 ADAM19Q9H013 955 aa13.7□□□□□ -0.22
CPSF1-210ENST00000532935 TMEM38AQ9H6F2 299 aa13.7□□□□□ -0.22
CPSF1-210ENST00000532935 C12orf49Q9H741 205 aa13.7□□□□□ -0.22
CPSF1-210ENST00000532935 GP6Q9HCN6 339 aa13.7□□□□□ -0.22
CPSF1-210ENST00000532935 RASSF1Q9NS23 344 aa13.7□□□□□ -0.22
CPSF1-210ENST00000532935 KLHL13Q9P2N7 655 aa13.7□□□□□ -0.22
CPSF1-210ENST00000532935 NDRG3Q9UGV2 375 aa13.7□□□□□ -0.22
CPSF1-210ENST00000532935 PRDM4Q9UKN5 801 aa13.7□□□□□ -0.22
CPSF1-210ENST00000532935 HDGFL3Q9Y3E1 203 aa13.7□□□□□ -0.22
CPSF1-210ENST00000532935 TMEM72A0PK05 275 aa13.69□□□□□ -0.22
CPSF1-210ENST00000532935 ZNF208O43345 1280 aa13.69□□□□□ -0.22
CPSF1-210ENST00000532935 CYTIPO60759 359 aa13.69□□□□□ -0.22
CPSF1-210ENST00000532935 PMS2P2O95744 297 aa13.69□□□□□ -0.22
CPSF1-210ENST00000532935 FESP07332 822 aa13.69□□□□□ -0.22
CPSF1-210ENST00000532935 KLK2P20151 261 aa13.69□□□□□ -0.22
CPSF1-210ENST00000532935 SLC6A2P23975 617 aa13.69□□□□□ -0.22
CPSF1-210ENST00000532935 UGT2B10P36537 528 aa13.69□□□□□ -0.22
CPSF1-210ENST00000532935 RASGEF1BQ0VAM2 473 aa13.69□□□□□ -0.22
CPSF1-210ENST00000532935 SCARB2Q14108 478 aa13.69□□□□□ -0.22
CPSF1-210ENST00000532935 ADRM1Q16186 407 aa13.69□□□□□ -0.22
CPSF1-210ENST00000532935 ZNF771Q7L3S4 317 aaPredicted RBP13.69□□□□□ -0.22
CPSF1-210ENST00000532935 PIGWQ7Z7B1 504 aa13.69□□□□□ -0.22
CPSF1-210ENST00000532935 SERPINA11Q86U17 422 aa13.69□□□□□ -0.22
CPSF1-210ENST00000532935 KRT73Q86Y46 540 aa13.69□□□□□ -0.22
CPSF1-210ENST00000532935 CADM2Q8N3J6 435 aa13.69□□□□□ -0.22
CPSF1-210ENST00000532935 DNAJA3Q96EY1 480 aa13.69□□□□□ -0.22
CPSF1-210ENST00000532935 PSD2Q9BQI7 771 aa13.69□□□□□ -0.22
CPSF1-210ENST00000532935 POLDIP3Q9BY77 421 aaKnown RBP13.69□□□□□ -0.22
CPSF1-210ENST00000532935 SAR1AQ9NR31 198 aa13.69□□□□□ -0.22
CPSF1-210ENST00000532935 KLHL14Q9P2G3 628 aa13.69□□□□□ -0.22
CPSF1-210ENST00000532935 KLHL9Q9P2J3 617 aa13.69□□□□□ -0.22
CPSF1-210ENST00000532935 ING1Q9UK53 422 aaPredicted RBP13.69□□□□□ -0.22
CPSF1-210ENST00000532935 TESMINQ9Y4I5 508 aa13.69□□□□□ -0.22
CPSF1-210ENST00000532935 C16orf97H3BN30 126 aa13.68□□□□□ -0.22
CPSF1-210ENST00000532935 FBP2O00757 339 aa13.68□□□□□ -0.22
CPSF1-210ENST00000532935 DNPH1O43598 174 aa13.68□□□□□ -0.22
CPSF1-210ENST00000532935 YES1P07947 543 aa13.68□□□□□ -0.22
CPSF1-210ENST00000532935 PRG2P13727 222 aa13.68□□□□□ -0.22
CPSF1-210ENST00000532935 PRKAR1BP31321 381 aa13.68□□□□□ -0.22
CPSF1-210ENST00000532935 CCKARP32238 428 aa13.68□□□□□ -0.22
CPSF1-210ENST00000532935 MAP2K6P52564 334 aa13.68□□□□□ -0.22
CPSF1-210ENST00000532935 MTPNP58546 118 aa13.68□□□□□ -0.22
CPSF1-210ENST00000532935 COPZ1P61923 177 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms