RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 ENPP6Q6UWR7 440 aa2.25□□□□□ -2.05
CD44-234ENST00000531873 C2orf66Q6UXQ4 117 aa2.25□□□□□ -2.05
CD44-234ENST00000531873 KDM7AQ6ZMT4 941 aa2.25□□□□□ -2.05
CD44-234ENST00000531873 RUFY3Q7L099 469 aa2.25□□□□□ -2.05
CD44-234ENST00000531873 SKA3Q8IX90 412 aa2.25□□□□□ -2.05
CD44-234ENST00000531873 GPR137CQ8N3F9 429 aa2.25□□□□□ -2.05
CD44-234ENST00000531873 KLHL30-AS1Q8NEE0 82 aa2.25□□□□□ -2.05
CD44-234ENST00000531873 SDR9C7Q8NEX9 313 aa2.25□□□□□ -2.05
CD44-234ENST00000531873 OR2A12Q8NGT7 310 aa2.25□□□□□ -2.05
CD44-234ENST00000531873 SLC2A14Q8TDB8 520 aa2.25□□□□□ -2.05
CD44-234ENST00000531873 AGAP11Q8TF27 550 aa2.25□□□□□ -2.05
CD44-234ENST00000531873 EFHD2Q96C19 240 aaPredicted RBP2.25□□□□□ -2.05
CD44-234ENST00000531873 CNOT6LQ96LI5 555 aaKnown RBP2.25□□□□□ -2.05
CD44-234ENST00000531873 RNF2Q99496 336 aa2.25□□□□□ -2.05
CD44-234ENST00000531873 KLHDC3Q9BQ90 382 aa2.25□□□□□ -2.05
CD44-234ENST00000531873 SLC39A3Q9BRY0 314 aa2.25□□□□□ -2.05
CD44-234ENST00000531873 RNF126Q9BV68 326 aa2.25□□□□□ -2.05
CD44-234ENST00000531873 SMYD3Q9H7B4 428 aa2.25□□□□□ -2.05
CD44-234ENST00000531873 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.25□□□□□ -2.05
CD44-234ENST00000531873 OR1A1Q9P1Q5 309 aa2.25□□□□□ -2.05
CD44-234ENST00000531873 RABL2AQ9UBK7 228 aaPredicted RBP2.25□□□□□ -2.05
CD44-234ENST00000531873 RSPH14Q9UHP6 348 aa2.25□□□□□ -2.05
CD44-234ENST00000531873 PHF11Q9UIL8 331 aa2.25□□□□□ -2.05
CD44-234ENST00000531873 PRPF19Q9UMS4 504 aaKnown RBP2.25□□□□□ -2.05
CD44-234ENST00000531873 PPIAL4AQ9Y536 164 aa2.25□□□□□ -2.05
CD44-234ENST00000531873 ZNF318Q5VUA4 2279 aa2.24□□□□□ -2.05
CD44-234ENST00000531873 IGHV1OR15-1A0A075B7D0 117 aa2.24□□□□□ -2.05
CD44-234ENST00000531873 IDSB3KWA1 339 aa2.24□□□□□ -2.05
CD44-234ENST00000531873 GFYI3L273 518 aa2.24□□□□□ -2.05
CD44-234ENST00000531873 DNALI1O14645 258 aaPredicted RBP2.24□□□□□ -2.05
CD44-234ENST00000531873 POLR2DO15514 142 aaKnown RBP2.24□□□□□ -2.05
CD44-234ENST00000531873 GPAA1O43292 621 aa2.24□□□□□ -2.05
CD44-234ENST00000531873 PFKFB2O60825 505 aa2.24□□□□□ -2.05
CD44-234ENST00000531873 CIB2O75838 187 aa2.24□□□□□ -2.05
CD44-234ENST00000531873 CRYGBP07316 175 aa2.24□□□□□ -2.05
CD44-234ENST00000531873 GATA1P15976 413 aaPredicted RBP2.24□□□□□ -2.05
CD44-234ENST00000531873 COX5AP20674 150 aa2.24□□□□□ -2.05
CD44-234ENST00000531873 GATA2P23769 480 aaPredicted RBP2.24□□□□□ -2.05
CD44-234ENST00000531873 GNA11P29992 359 aa2.24□□□□□ -2.05
CD44-234ENST00000531873 GCKP35557 465 aa2.24□□□□□ -2.05
CD44-234ENST00000531873 MDH2P40926 338 aaKnown RBP2.24□□□□□ -2.05
CD44-234ENST00000531873 OPRD1P41143 372 aa2.24□□□□□ -2.05
CD44-234ENST00000531873 KIR2DS2P43631 304 aa2.24□□□□□ -2.05
CD44-234ENST00000531873 HNRNPA3P51991 378 aaKnown RBP2.24□□□□□ -2.05
CD44-234ENST00000531873 SLC25A1P53007 311 aa2.24□□□□□ -2.05
CD44-234ENST00000531873 ATP5IP56385 69 aaPredicted RBP2.24□□□□□ -2.05
CD44-234ENST00000531873 ASAH1Q13510 395 aa2.24□□□□□ -2.05
CD44-234ENST00000531873 Q1RN00 199 aa2.24□□□□□ -2.05
CD44-234ENST00000531873 CARD16Q5EG05 197 aa2.24□□□□□ -2.05
CD44-234ENST00000531873 RNLSQ5VYX0 342 aa2.24□□□□□ -2.05
CD44-234ENST00000531873 OR5M10Q6IEU7 315 aa2.24□□□□□ -2.05
CD44-234ENST00000531873 STXBP4Q6ZWJ1 553 aa2.24□□□□□ -2.05
CD44-234ENST00000531873 TGIF2LXQ8IUE1 241 aa2.24□□□□□ -2.05
CD44-234ENST00000531873 CCDC50Q8IVM0 306 aa2.24□□□□□ -2.05
CD44-234ENST00000531873 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.24□□□□□ -2.05
CD44-234ENST00000531873 NECAB1Q8N987 351 aa2.24□□□□□ -2.05
CD44-234ENST00000531873 OR2L3Q8NG85 312 aa2.24□□□□□ -2.05
CD44-234ENST00000531873 OR52K2Q8NGK3 314 aa2.24□□□□□ -2.05
CD44-234ENST00000531873 OR1L6Q8NGR2 347 aa2.24□□□□□ -2.05
CD44-234ENST00000531873 MAIP1Q8WWC4 291 aa2.24□□□□□ -2.05
CD44-234ENST00000531873 MRPS31Q92665 395 aaKnown RBP2.24□□□□□ -2.05
CD44-234ENST00000531873 UBE2E3Q969T4 207 aa2.24□□□□□ -2.05
CD44-234ENST00000531873 MS4A14Q96JA4 679 aa2.24□□□□□ -2.05
CD44-234ENST00000531873 KCNA7Q96RP8 456 aa2.24□□□□□ -2.05
CD44-234ENST00000531873 FMO2Q99518 471 aa2.24□□□□□ -2.05
CD44-234ENST00000531873 ANKRD19PQ9H560 264 aa2.24□□□□□ -2.05
CD44-234ENST00000531873 SPATA7Q9P0W8 599 aa2.24□□□□□ -2.05
CD44-234ENST00000531873 DPM3Q9P2X0 92 aa2.24□□□□□ -2.05
CD44-234ENST00000531873 SLC7A8Q9UHI5 535 aa2.24□□□□□ -2.05
CD44-234ENST00000531873 CSAG2Q9Y5P2 127 aa2.24□□□□□ -2.05
CD44-234ENST00000531873 POGZQ7Z3K3 1410 aa2.24□□□□□ -2.05
CD44-234ENST00000531873 AGRNO00468 2067 aa2.24□□□□□ -2.05
CD44-234ENST00000531873 CROCCQ5TZA2 2017 aa2.24□□□□□ -2.05
CD44-234ENST00000531873 PPIAL4EA0A075B759 164 aa2.23□□□□□ -2.05
CD44-234ENST00000531873 OR2AG2A6NM03 316 aa2.23□□□□□ -2.05
CD44-234ENST00000531873 DHRS7CA6NNS2 312 aa2.23□□□□□ -2.05
CD44-234ENST00000531873 E9PBE3 544 aa2.23□□□□□ -2.05
CD44-234ENST00000531873 HSD17B6O14756 317 aa2.23□□□□□ -2.05
CD44-234ENST00000531873 HCN1O60741 890 aa2.23□□□□□ -2.05
CD44-234ENST00000531873 SLITRK3O94933 977 aa2.23□□□□□ -2.05
CD44-234ENST00000531873 NDUFB10O96000 172 aa2.23□□□□□ -2.05
CD44-234ENST00000531873 CST1P01037 141 aa2.23□□□□□ -2.05
CD44-234ENST00000531873 CT62P0C5K7 136 aa2.23□□□□□ -2.05
CD44-234ENST00000531873 PABPC4LP0CB38 370 aaKnown RBP2.23□□□□□ -2.05
CD44-234ENST00000531873 RBMY1CP0DJD4 496 aa2.23□□□□□ -2.05
CD44-234ENST00000531873 PPIAL4FP0DN26 164 aa2.23□□□□□ -2.05
CD44-234ENST00000531873 VDAC1P21796 283 aa2.23□□□□□ -2.05
CD44-234ENST00000531873 GDF1P27539 372 aa2.23□□□□□ -2.05
CD44-234ENST00000531873 HTR1FP30939 366 aa2.23□□□□□ -2.05
CD44-234ENST00000531873 HNRNPH3P31942 346 aaKnown RBP2.23□□□□□ -2.05
CD44-234ENST00000531873 YWHABP31946 246 aaKnown RBP2.23□□□□□ -2.05
CD44-234ENST00000531873 EPHX2P34913 555 aa2.23□□□□□ -2.05
CD44-234ENST00000531873 RDXP35241 583 aaKnown RBP2.23□□□□□ -2.05
CD44-234ENST00000531873 EPS15P42566 896 aa2.23□□□□□ -2.05
CD44-234ENST00000531873 VEGFCP49767 419 aa2.23□□□□□ -2.05
CD44-234ENST00000531873 BIDP55957 195 aa2.23□□□□□ -2.05
CD44-234ENST00000531873 OGDHQ02218 1023 aa2.23□□□□□ -2.05
CD44-234ENST00000531873 CD47Q08722 323 aa2.23□□□□□ -2.05
CD44-234ENST00000531873 EGFEM1PQ0D2K5 195 aa2.23□□□□□ -2.05
CD44-234ENST00000531873 PPIL2Q13356 520 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms