RNA–Protein interactions for RNA: ENST00000530290.5

CTSB-216, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-216ENST00000530290 DDX28Q9NUL7 540 aaKnown RBP4.88□□□□□ -1.63
CTSB-216ENST00000530290 HIF1ANQ9NWT6 349 aa4.88□□□□□ -1.63
CTSB-216ENST00000530290 MED29Q9NX70 200 aa4.88□□□□□ -1.63
CTSB-216ENST00000530290 GRHL1Q9NZI5 618 aa4.88□□□□□ -1.63
CTSB-216ENST00000530290 ARMCX1Q9P291 453 aa4.88□□□□□ -1.63
CTSB-216ENST00000530290 CRNNQ9UBG3 495 aaPredicted RBP4.88□□□□□ -1.63
CTSB-216ENST00000530290 PCDHGB4Q9UN71 923 aa4.88□□□□□ -1.63
CTSB-216ENST00000530290 DTNAQ9Y4J8 743 aa4.88□□□□□ -1.63
CTSB-216ENST00000530290 IGHV3-15A0A0B4J1V0 119 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 A0A1W2PNR3 127 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 NPIPB9F8W1W9 429 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 hCG_2039718K7EN88 272 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 EFNA2O43921 213 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 SUPT7LO94864 414 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 H6PDO95479 791 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 IGLV1-44P01699 117 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 INHBAP08476 426 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 ACP2P11117 423 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 NPR2P20594 1047 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 PRPH2P23942 346 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 FPR2P25090 351 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 HSD17B3P37058 310 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 APOBEC1P41238 236 aaKnown RBP4.87□□□□□ -1.63
CTSB-216ENST00000530290 MAGEA4P43358 317 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 GPR6P46095 362 aaPredicted RBP4.87□□□□□ -1.63
CTSB-216ENST00000530290 HTR3AP46098 478 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 ASMTP46597 345 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 CCR4P51679 360 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 CDH13P55290 713 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 TMEM33P57088 247 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 IL13RA1P78552 427 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 NAAAQ02083 359 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 DUSP5Q16690 384 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 TIGD2Q4W5G0 525 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 MIDNQ504T8 468 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 FAM209AQ5JX71 171 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 SPDYAQ5MJ70 313 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 ZNF678Q5SXM1 525 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 CDC73Q6P1J9 531 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 RBMS3Q6XE24 437 aaKnown RBP4.87□□□□□ -1.63
CTSB-216ENST00000530290 GRINAQ7Z429 371 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 TRIM46Q7Z4K8 759 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 R3HCC1LQ7Z5L2 792 aaKnown RBP4.87□□□□□ -1.63
CTSB-216ENST00000530290 C1QL2Q7Z5L3 287 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 SPATA19Q7Z5L4 167 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 CCDC36Q8IYA8 594 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 TMCO5AQ8N6Q1 288 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 ANKS4BQ8N8V4 417 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 SLC16A11Q8NCK7 471 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 ANKK1Q8NFD2 765 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 OR56A1Q8NGH5 318 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 CDC26Q8NHZ8 85 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 NANPQ8TBE9 248 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 PMM1Q92871 262 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 PPCDCQ96CD2 204 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 RAB39BQ96DA2 213 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 CCDC126Q96EE4 140 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 NAA11Q9BSU3 229 aaPredicted RBP4.87□□□□□ -1.63
CTSB-216ENST00000530290 SOX7Q9BT81 388 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 SF3B5Q9BWJ5 86 aaKnown RBP4.87□□□□□ -1.63
CTSB-216ENST00000530290 ZNF416Q9BWM5 594 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 LAT2Q9GZY6 243 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 TSPYL1Q9H0U9 437 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 CDC42EP4Q9H3Q1 356 aaKnown RBP4.87□□□□□ -1.63
CTSB-216ENST00000530290 MS4A5Q9H3V2 200 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 ACSS3Q9H6R3 686 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 ACER3Q9NUN7 267 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 CHRNA9Q9UGM1 479 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 ZNF225Q9UK10 706 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 FAF1Q9UNN5 650 aaPredicted RBP4.87□□□□□ -1.63
CTSB-216ENST00000530290 MOKQ9UQ07 419 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 TRAPPC4Q9Y296 219 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 SLC35A3Q9Y2D2 325 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 CARD8Q9Y2G2 431 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 SNX24Q9Y343 169 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 UTP11Q9Y3A2 253 aaKnown RBP4.87□□□□□ -1.63
CTSB-216ENST00000530290 TMED5Q9Y3A6 229 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 PTGDR2Q9Y5Y4 395 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 DOCK11Q5JSL3 2073 aa4.87□□□□□ -1.63
CTSB-216ENST00000530290 IGHV1-18A0A0C4DH31 117 aa4.86□□□□□ -1.63
CTSB-216ENST00000530290 A0A1B0GUS0 222 aa4.86□□□□□ -1.63
CTSB-216ENST00000530290 HMX2A2RU54 273 aa4.86□□□□□ -1.63
CTSB-216ENST00000530290 DUXAA6NLW8 204 aa4.86□□□□□ -1.63
CTSB-216ENST00000530290 ZNF587BE7ETH6 402 aa4.86□□□□□ -1.63
CTSB-216ENST00000530290 M0R233 179 aa4.86□□□□□ -1.63
CTSB-216ENST00000530290 PIP5K1BO14986 540 aa4.86□□□□□ -1.63
CTSB-216ENST00000530290 VAMP5O95183 116 aa4.86□□□□□ -1.63
CTSB-216ENST00000530290 AGR2O95994 175 aa4.86□□□□□ -1.63
CTSB-216ENST00000530290 IGKV3-15P01624 115 aa4.86□□□□□ -1.63
CTSB-216ENST00000530290 IGHV3-9P01782 118 aa4.86□□□□□ -1.63
CTSB-216ENST00000530290 GUSBP08236 651 aa4.86□□□□□ -1.63
CTSB-216ENST00000530290 GAAP10253 952 aa4.86□□□□□ -1.63
CTSB-216ENST00000530290 UQCRBP14927 111 aa4.86□□□□□ -1.63
CTSB-216ENST00000530290 CHN1P15882 459 aa4.86□□□□□ -1.63
CTSB-216ENST00000530290 ADRA2CP18825 462 aa4.86□□□□□ -1.63
CTSB-216ENST00000530290 ATP5F1P24539 256 aaPredicted RBP4.86□□□□□ -1.63
CTSB-216ENST00000530290 EDNRAP25101 427 aa4.86□□□□□ -1.63
CTSB-216ENST00000530290 GCH1P30793 250 aa4.86□□□□□ -1.63
CTSB-216ENST00000530290 IL2RGP31785 369 aa4.86□□□□□ -1.63
CTSB-216ENST00000530290 HPCAL1P37235 193 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms