RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 SLC9A3P48764 834 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 ZNF136P52737 540 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 GFRA1P56159 465 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 PER3P56645 1201 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 CARD18P57730 90 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 RAC3P60763 192 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 MS4A2Q01362 244 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 SPIBQ01892 262 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 GTF3C1Q12789 2109 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 FOXF1Q12946 379 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 RNPS1Q15287 305 aaKnown RBP7.17□□□□□ -1.26
SSBP3-211ENST00000528787 TMEM44Q2T9K0 475 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 CMPK2Q5EBM0 449 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 WIPI1Q5MNZ9 446 aaPredicted RBP7.17□□□□□ -1.26
SSBP3-211ENST00000528787 FAM69AQ5T7M9 428 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 ZNF324BQ6AW86 544 aaPredicted RBP7.17□□□□□ -1.26
SSBP3-211ENST00000528787 VASNQ6EMK4 673 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 OR2T5Q6IEZ7 315 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 ARSKQ6UWY0 536 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 ZNF730Q6ZMV8 503 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 MAMDC2Q7Z304 686 aaPredicted RBP7.17□□□□□ -1.26
SSBP3-211ENST00000528787 VTCN1Q7Z7D3 282 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 ATG4DQ86TL0 474 aaPredicted RBP7.17□□□□□ -1.26
SSBP3-211ENST00000528787 HIPK1Q86Z02 1210 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 SIAH3Q8IW03 269 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 SVOPLQ8N434 492 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 SCAIQ8N9R8 606 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 Q8NA96 180 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 GALNT11Q8NCW6 608 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 OR2T29Q8NH02 315 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 MFSD8Q8NHS3 518 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 CANT1Q8WVQ1 401 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 TMEM239Q8WW34 195 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 C3orf49Q96BT1 292 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 LRRC46Q96FV0 321 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 CRELD1Q96HD1 420 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 C7orf34Q96L11 122 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 KLHL15Q96M94 604 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 TAAR6Q96RI8 345 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 CHID1Q9BWS9 393 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 PRRG4Q9BZD6 226 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 AMBRA1Q9C0C7 1298 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 PRDM14Q9GZV8 571 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 DEFB127Q9H1M4 99 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 VCX3BQ9H321 246 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 CALHM2Q9HA72 323 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 NDUFAF4Q9P032 175 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 C6orf203Q9P0P8 240 aaPredicted RBP7.17□□□□□ -1.26
SSBP3-211ENST00000528787 OSGIN1Q9UJX0 560 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 SLC7A7Q9UM01 511 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 USP22Q9UPT9 525 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 RPH3AQ9Y2J0 694 aaPredicted RBP7.17□□□□□ -1.26
SSBP3-211ENST00000528787 ORC6Q9Y5N6 252 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 CSAG2Q9Y5P2 127 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 USP24Q9UPU5 2620 aa7.17□□□□□ -1.26
SSBP3-211ENST00000528787 PIEZO2Q9H5I5 2752 aa7.16□□□□□ -1.26
SSBP3-211ENST00000528787 TLN1Q9Y490 2541 aaKnown RBP7.16□□□□□ -1.26
SSBP3-211ENST00000528787 A0A0G2JMM0 328 aa7.16□□□□□ -1.26
SSBP3-211ENST00000528787 A0A1W2PPB8 328 aa7.16□□□□□ -1.26
SSBP3-211ENST00000528787 A0A1W2PRS3 328 aa7.16□□□□□ -1.26
SSBP3-211ENST00000528787 PINLYPA6NC86 204 aa7.16□□□□□ -1.26
SSBP3-211ENST00000528787 OR6C65A6NJZ3 312 aa7.16□□□□□ -1.26
SSBP3-211ENST00000528787 CLDN24A6NM45 220 aa7.16□□□□□ -1.26
SSBP3-211ENST00000528787 KIR3DP1A8MWS1 328 aa7.16□□□□□ -1.26
SSBP3-211ENST00000528787 K7EM74 188 aa7.16□□□□□ -1.26
SSBP3-211ENST00000528787 SULT2B1O00204 365 aa7.16□□□□□ -1.26
SSBP3-211ENST00000528787 TNFRSF11BO00300 401 aa7.16□□□□□ -1.26
SSBP3-211ENST00000528787 GPR171O14626 319 aa7.16□□□□□ -1.26
SSBP3-211ENST00000528787 CLOCKO15516 846 aa7.16□□□□□ -1.26
SSBP3-211ENST00000528787 GMFGO60234 142 aa7.16□□□□□ -1.26
SSBP3-211ENST00000528787 MT-ND1P03886 318 aa7.16□□□□□ -1.26
SSBP3-211ENST00000528787 SEMG1P04279 462 aa7.16□□□□□ -1.26
SSBP3-211ENST00000528787 CRHP06850 196 aa7.16□□□□□ -1.26
SSBP3-211ENST00000528787 RFPL3SP0C7P2 107 aa7.16□□□□□ -1.26
SSBP3-211ENST00000528787 BMP7P18075 431 aa7.16□□□□□ -1.26
SSBP3-211ENST00000528787 CDH2P19022 906 aaPredicted RBP7.16□□□□□ -1.26
SSBP3-211ENST00000528787 DNAJA1P31689 397 aaKnown RBP7.16□□□□□ -1.26
SSBP3-211ENST00000528787 RFC3P40938 356 aa7.16□□□□□ -1.26
SSBP3-211ENST00000528787 HMGA2P52926 109 aa7.16□□□□□ -1.26
SSBP3-211ENST00000528787 CRYBA2P53672 197 aa7.16□□□□□ -1.26
SSBP3-211ENST00000528787 CDH12P55289 794 aa7.16□□□□□ -1.26
SSBP3-211ENST00000528787 PRPS1P60891 318 aa7.16□□□□□ -1.26
SSBP3-211ENST00000528787 COX10Q12887 443 aa7.16□□□□□ -1.26
SSBP3-211ENST00000528787 FGD3Q5JSP0 725 aa7.16□□□□□ -1.26
SSBP3-211ENST00000528787 C1orf140Q5VVS0 124 aa7.16□□□□□ -1.26
SSBP3-211ENST00000528787 HBMQ6B0K9 141 aa7.16□□□□□ -1.26
SSBP3-211ENST00000528787 DESI1Q6ICB0 168 aa7.16□□□□□ -1.26
SSBP3-211ENST00000528787 TMPPEQ6ZT21 453 aa7.16□□□□□ -1.26
SSBP3-211ENST00000528787 P4HA3Q7Z4N8 544 aa7.16□□□□□ -1.26
SSBP3-211ENST00000528787 GDF7Q7Z4P5 450 aa7.16□□□□□ -1.26
SSBP3-211ENST00000528787 YRDCQ86U90 279 aaKnown RBP7.16□□□□□ -1.26
SSBP3-211ENST00000528787 ZDHHC13Q8IUH4 622 aa7.16□□□□□ -1.26
SSBP3-211ENST00000528787 LACC1Q8IV20 430 aa7.16□□□□□ -1.26
SSBP3-211ENST00000528787 MCEMP1Q8IX19 187 aa7.16□□□□□ -1.26
SSBP3-211ENST00000528787 ADGRG5Q8IZF4 528 aa7.16□□□□□ -1.26
SSBP3-211ENST00000528787 ADPRHL1Q8NDY3 354 aa7.16□□□□□ -1.26
SSBP3-211ENST00000528787 PIGXQ8TBF5 258 aa7.16□□□□□ -1.26
SSBP3-211ENST00000528787 FAM57AQ8TBR7 257 aa7.16□□□□□ -1.26
SSBP3-211ENST00000528787 MIB2Q96AX9 1013 aa7.16□□□□□ -1.26
SSBP3-211ENST00000528787 CENPNQ96H22 339 aaPredicted RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms