RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 PJVKQ0ZLH3 352 aa4.83□□□□□ -1.64
PCF11-202ENST00000528336 CALCOCO2Q13137 446 aa4.83□□□□□ -1.64
PCF11-202ENST00000528336 SRSF9Q13242 221 aaKnown RBP eCLIP4.83□□□□□ -1.64
PCF11-202ENST00000528336 NFATC2Q13469 925 aa4.83□□□□□ -1.64
PCF11-202ENST00000528336 GPR176Q14439 515 aa4.83□□□□□ -1.64
PCF11-202ENST00000528336 P2RY14Q15391 338 aa4.83□□□□□ -1.64
PCF11-202ENST00000528336 LINC01620Q4KN68 170 aa4.83□□□□□ -1.64
PCF11-202ENST00000528336 ZNF542PQ5EBM4 170 aa4.83□□□□□ -1.64
PCF11-202ENST00000528336 BEX5Q5H9J7 111 aa4.83□□□□□ -1.64
PCF11-202ENST00000528336 C6orf226Q5I0X4 101 aa4.83□□□□□ -1.64
PCF11-202ENST00000528336 SPECC1LQ69YQ0 1117 aa4.83□□□□□ -1.64
PCF11-202ENST00000528336 CENPUQ71F23 418 aa4.83□□□□□ -1.64
PCF11-202ENST00000528336 C5orf24Q7Z6I8 188 aa4.83□□□□□ -1.64
PCF11-202ENST00000528336 PRUNE1Q86TP1 453 aa4.83□□□□□ -1.64
PCF11-202ENST00000528336 MICU2Q8IYU8 434 aa4.83□□□□□ -1.64
PCF11-202ENST00000528336 ST13P4Q8IZP2 240 aaPredicted RBP4.83□□□□□ -1.64
PCF11-202ENST00000528336 PQLC3Q8N755 202 aa4.83□□□□□ -1.64
PCF11-202ENST00000528336 GATSQ8NAP1 163 aa4.83□□□□□ -1.64
PCF11-202ENST00000528336 ZNF461Q8TAF7 563 aa4.83□□□□□ -1.64
PCF11-202ENST00000528336 LRRC20Q8TCA0 184 aa4.83□□□□□ -1.64
PCF11-202ENST00000528336 RFT1Q96AA3 541 aa4.83□□□□□ -1.64
PCF11-202ENST00000528336 ATXN7L3BQ96GX2 97 aa4.83□□□□□ -1.64
PCF11-202ENST00000528336 AGAP4Q96P64 663 aa4.83□□□□□ -1.64
PCF11-202ENST00000528336 SLC29A1Q99808 456 aa4.83□□□□□ -1.64
PCF11-202ENST00000528336 RBM4BQ9BQ04 359 aaKnown RBP4.83□□□□□ -1.64
PCF11-202ENST00000528336 UBAC1Q9BSL1 405 aa4.83□□□□□ -1.64
PCF11-202ENST00000528336 LRRC61Q9BV99 259 aa4.83□□□□□ -1.64
PCF11-202ENST00000528336 TRIM9Q9C026 710 aa4.83□□□□□ -1.64
PCF11-202ENST00000528336 HDHD2Q9H0R4 259 aa4.83□□□□□ -1.64
PCF11-202ENST00000528336 UFSP2Q9NUQ7 469 aa4.83□□□□□ -1.64
PCF11-202ENST00000528336 AHSPQ9NZD4 102 aa4.83□□□□□ -1.64
PCF11-202ENST00000528336 EMC3Q9P0I2 261 aa4.83□□□□□ -1.64
PCF11-202ENST00000528336 MBD2Q9UBB5 411 aa4.83□□□□□ -1.64
PCF11-202ENST00000528336 LNPEPQ9UIQ6 1025 aa4.83□□□□□ -1.64
PCF11-202ENST00000528336 PILRBQ9UKJ0 227 aa4.83□□□□□ -1.64
PCF11-202ENST00000528336 SLX4Q8IY92 1834 aa4.83□□□□□ -1.64
PCF11-202ENST00000528336 COL4A1P02462 1669 aa4.83□□□□□ -1.64
PCF11-202ENST00000528336 MYH3P11055 1940 aa4.82□□□□□ -1.64
PCF11-202ENST00000528336 ARFGEF1Q9Y6D6 1849 aa4.82□□□□□ -1.64
PCF11-202ENST00000528336 TRAV18A0A075B6X5 111 aa4.82□□□□□ -1.64
PCF11-202ENST00000528336 BTN3A3O00478 584 aa4.82□□□□□ -1.64
PCF11-202ENST00000528336 SOCS3O14543 225 aa4.82□□□□□ -1.64
PCF11-202ENST00000528336 SURF4O15260 269 aa4.82□□□□□ -1.64
PCF11-202ENST00000528336 TIMM8AO60220 97 aaPredicted RBP4.82□□□□□ -1.64
PCF11-202ENST00000528336 MYO1DO94832 1006 aa4.82□□□□□ -1.64
PCF11-202ENST00000528336 OR2F2O95006 317 aa4.82□□□□□ -1.64
PCF11-202ENST00000528336 PGK1P00558 417 aa4.82□□□□□ -1.64
PCF11-202ENST00000528336 CALCAP01258 141 aa4.82□□□□□ -1.64
PCF11-202ENST00000528336 FTH1P02794 183 aa4.82□□□□□ -1.64
PCF11-202ENST00000528336 ACKR3P25106 362 aa4.82□□□□□ -1.64
PCF11-202ENST00000528336 RBMS1P29558 406 aaKnown RBP4.82□□□□□ -1.64
PCF11-202ENST00000528336 NAA10P41227 235 aaPredicted RBP4.82□□□□□ -1.64
PCF11-202ENST00000528336 RCAN2Q14206 197 aa4.82□□□□□ -1.64
PCF11-202ENST00000528336 STK38Q15208 465 aa4.82□□□□□ -1.64
PCF11-202ENST00000528336 ANGPT1Q15389 498 aa4.82□□□□□ -1.64
PCF11-202ENST00000528336 LPAL2Q16609 132 aa4.82□□□□□ -1.64
PCF11-202ENST00000528336 HSP90AA4PQ58FG1 418 aa4.82□□□□□ -1.64
PCF11-202ENST00000528336 ATP1A1-AS1Q5TC04 95 aa4.82□□□□□ -1.64
PCF11-202ENST00000528336 LIPKQ5VXJ0 399 aa4.82□□□□□ -1.64
PCF11-202ENST00000528336 HIST2H2AA3Q6FI13 130 aa4.82□□□□□ -1.64
PCF11-202ENST00000528336 CAPN13Q6MZZ7 669 aaPredicted RBP4.82□□□□□ -1.64
PCF11-202ENST00000528336 RNASEKQ6P5S7 137 aaKnown RBP4.82□□□□□ -1.64
PCF11-202ENST00000528336 GPRIN3Q6ZVF9 776 aa4.82□□□□□ -1.64
PCF11-202ENST00000528336 NDUFAF7Q7L592 441 aa4.82□□□□□ -1.64
PCF11-202ENST00000528336 NLRP9Q7RTR0 991 aa4.82□□□□□ -1.64
PCF11-202ENST00000528336 SSX9Q7RTT3 188 aa4.82□□□□□ -1.64
PCF11-202ENST00000528336 GTSCR1Q86UQ5 136 aa4.82□□□□□ -1.64
PCF11-202ENST00000528336 METTL4Q8N3J2 472 aa4.82□□□□□ -1.64
PCF11-202ENST00000528336 PRSS35Q8N3Z0 413 aa4.82□□□□□ -1.64
PCF11-202ENST00000528336 CEP112Q8N8E3 955 aa4.82□□□□□ -1.64
PCF11-202ENST00000528336 Q8NBF4 154 aa4.82□□□□□ -1.64
PCF11-202ENST00000528336 FAM83FQ8NEG4 500 aaPredicted RBP4.82□□□□□ -1.64
PCF11-202ENST00000528336 ST8SIA1Q92185 356 aa4.82□□□□□ -1.64
PCF11-202ENST00000528336 P3H4Q92791 437 aa4.82□□□□□ -1.64
PCF11-202ENST00000528336 TMEM45BQ96B21 275 aa4.82□□□□□ -1.64
PCF11-202ENST00000528336 VSTM2LQ96N03 204 aa4.82□□□□□ -1.64
PCF11-202ENST00000528336 ZNF317Q96PQ6 595 aaPredicted RBP4.82□□□□□ -1.64
PCF11-202ENST00000528336 LRRC2Q9BYS8 371 aa4.82□□□□□ -1.64
PCF11-202ENST00000528336 UBXN6Q9BZV1 441 aa4.82□□□□□ -1.64
PCF11-202ENST00000528336 POLR3FQ9H1D9 316 aaPredicted RBP4.82□□□□□ -1.64
PCF11-202ENST00000528336 GANQ9H2C0 597 aa4.82□□□□□ -1.64
PCF11-202ENST00000528336 MTHFD2LQ9H903 347 aaPredicted RBP4.82□□□□□ -1.64
PCF11-202ENST00000528336 MRPL47Q9HD33 250 aaKnown RBP4.82□□□□□ -1.64
PCF11-202ENST00000528336 DDX28Q9NUL7 540 aaKnown RBP4.82□□□□□ -1.64
PCF11-202ENST00000528336 EURLQ9NYK6 297 aa4.82□□□□□ -1.64
PCF11-202ENST00000528336 MUTYHQ9UIF7 546 aa4.82□□□□□ -1.64
PCF11-202ENST00000528336 FBXL4Q9UKA2 621 aa4.82□□□□□ -1.64
PCF11-202ENST00000528336 VANGL2Q9ULK5 521 aa4.82□□□□□ -1.64
PCF11-202ENST00000528336 ERVK-19Q9WJR5 959 aa4.82□□□□□ -1.64
PCF11-202ENST00000528336 RNF24Q9Y225 148 aa4.82□□□□□ -1.64
PCF11-202ENST00000528336 MOB4Q9Y3A3 225 aa4.82□□□□□ -1.64
PCF11-202ENST00000528336 LRRC37AA6NMS7 1700 aa4.82□□□□□ -1.64
PCF11-202ENST00000528336 A0A087WZ39 114 aa4.81□□□□□ -1.64
PCF11-202ENST00000528336 GSTTP1A0A1W2PQM5 241 aa4.81□□□□□ -1.64
PCF11-202ENST00000528336 ESYT2A0FGR8 921 aa4.81□□□□□ -1.64
PCF11-202ENST00000528336 TUBAL3A6NHL2 446 aa4.81□□□□□ -1.64
PCF11-202ENST00000528336 PDZK1P1A8MUH7 402 aa4.81□□□□□ -1.64
PCF11-202ENST00000528336 M0R296 226 aa4.81□□□□□ -1.64
PCF11-202ENST00000528336 JAK2O60674 1132 aa4.81□□□□□ -1.64
PCF11-202ENST00000528336 HCN1O60741 890 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms