RNA–Protein interactions for RNA: ENST00000528256.1

PICALM-208, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 4

Gene PICALM, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-208	ENST00000528256	HIPK1	Q86Z02	1210 aa		4.89	□□□□□ -1.63
PICALM-208	ENST00000528256	KLHDC8A	Q8IYD2	350 aa		4.89	□□□□□ -1.63
PICALM-208	ENST00000528256	PM20D2	Q8IYS1	436 aa		4.89	□□□□□ -1.63
PICALM-208	ENST00000528256	LRRC25	Q8N386	305 aa	Predicted RBP	4.89	□□□□□ -1.63
PICALM-208	ENST00000528256	ZNF441	Q8N8Z8	693 aa		4.89	□□□□□ -1.63
PICALM-208	ENST00000528256	TTL	Q8NG68	377 aa		4.89	□□□□□ -1.63
PICALM-208	ENST00000528256	PAQR8	Q8TEZ7	354 aa		4.89	□□□□□ -1.63
PICALM-208	ENST00000528256	PTPMT1	Q8WUK0	201 aa	Predicted RBP	4.89	□□□□□ -1.63
PICALM-208	ENST00000528256	DOCK7	Q96N67	2140 aa		4.89	□□□□□ -1.63
PICALM-208	ENST00000528256	NODAL	Q96S42	347 aa		4.89	□□□□□ -1.63
PICALM-208	ENST00000528256	NDN	Q99608	321 aa		4.89	□□□□□ -1.63
PICALM-208	ENST00000528256	AICDA	Q9GZX7	198 aa		4.89	□□□□□ -1.63
PICALM-208	ENST00000528256	SH2D2A	Q9NP31	389 aa		4.89	□□□□□ -1.63
PICALM-208	ENST00000528256	C20orf96	Q9NUD7	363 aa	Predicted RBP	4.89	□□□□□ -1.63
PICALM-208	ENST00000528256	TRMT1	Q9NXH9	659 aa	Known RBP	4.89	□□□□□ -1.63
PICALM-208	ENST00000528256	MDFIC	Q9P1T7	246 aa		4.89	□□□□□ -1.63
PICALM-208	ENST00000528256	COPS7A	Q9UBW8	275 aa		4.89	□□□□□ -1.63
PICALM-208	ENST00000528256	VDAC3	Q9Y277	283 aa		4.89	□□□□□ -1.63
PICALM-208	ENST00000528256	KCNE2	Q9Y6J6	123 aa		4.89	□□□□□ -1.63
PICALM-208	ENST00000528256	FLNA	P21333	2647 aa	Known RBP	4.89	□□□□□ -1.63
PICALM-208	ENST00000528256	ZNF469	Q96JG9	3925 aa	Predicted RBP	4.89	□□□□□ -1.63
PICALM-208	ENST00000528256	CSPG4	Q6UVK1	2322 aa		4.88	□□□□□ -1.63
PICALM-208	ENST00000528256		A0A0G2JN53	185 aa		4.88	□□□□□ -1.63
PICALM-208	ENST00000528256	TEX13C	A0A0J9YWL9	993 aa		4.88	□□□□□ -1.63
PICALM-208	ENST00000528256	LRIT2	A6NDA9	550 aa		4.88	□□□□□ -1.63
PICALM-208	ENST00000528256	C17orf105	B2RV13	164 aa		4.88	□□□□□ -1.63
PICALM-208	ENST00000528256	TLX2	O43763	284 aa	Predicted RBP	4.88	□□□□□ -1.63
PICALM-208	ENST00000528256	TMCC2	O75069	709 aa		4.88	□□□□□ -1.63
PICALM-208	ENST00000528256	GUCA1C	O95843	209 aa		4.88	□□□□□ -1.63
PICALM-208	ENST00000528256	TF	P02787	698 aa		4.88	□□□□□ -1.63
PICALM-208	ENST00000528256	MLN	P12872	115 aa		4.88	□□□□□ -1.63
PICALM-208	ENST00000528256	COX7A2	P14406	83 aa		4.88	□□□□□ -1.63
PICALM-208	ENST00000528256	HPD	P32754	393 aa	Predicted RBP	4.88	□□□□□ -1.63
PICALM-208	ENST00000528256	KCNJ1	P48048	391 aa		4.88	□□□□□ -1.63
PICALM-208	ENST00000528256	TRPC1	P48995	793 aa		4.88	□□□□□ -1.63
PICALM-208	ENST00000528256	PLA2G16	P53816	162 aa		4.88	□□□□□ -1.63
PICALM-208	ENST00000528256	TERF1	P54274	439 aa		4.88	□□□□□ -1.63
PICALM-208	ENST00000528256	CDKN2D	P55273	166 aa		4.88	□□□□□ -1.63
PICALM-208	ENST00000528256	LIM2	P55344	173 aa		4.88	□□□□□ -1.63
PICALM-208	ENST00000528256	UFM1	P61960	85 aa		4.88	□□□□□ -1.63
PICALM-208	ENST00000528256	VAMP2	P63027	116 aa		4.88	□□□□□ -1.63
PICALM-208	ENST00000528256	DMTN	Q08495	405 aa		4.88	□□□□□ -1.63
PICALM-208	ENST00000528256	ASPH	Q12797	758 aa		4.88	□□□□□ -1.63
PICALM-208	ENST00000528256	STX4	Q12846	297 aa		4.88	□□□□□ -1.63
PICALM-208	ENST00000528256	ACKR1	Q16570	336 aa		4.88	□□□□□ -1.63
PICALM-208	ENST00000528256	HSP90AA5P	Q58FG0	334 aa		4.88	□□□□□ -1.63
PICALM-208	ENST00000528256	PRAMEF20	Q5VT98	475 aa		4.88	□□□□□ -1.63
PICALM-208	ENST00000528256	FAM122C	Q6P4D5	195 aa		4.88	□□□□□ -1.63
PICALM-208	ENST00000528256	THOC6	Q86W42	341 aa	Known RBP	4.88	□□□□□ -1.63
PICALM-208	ENST00000528256	TDRP	Q86YL5	185 aa		4.88	□□□□□ -1.63
PICALM-208	ENST00000528256	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	4.88	□□□□□ -1.63
PICALM-208	ENST00000528256	DND1	Q8IYX4	353 aa	Known RBP	4.88	□□□□□ -1.63
PICALM-208	ENST00000528256	RASGEF1C	Q8N431	466 aa		4.88	□□□□□ -1.63
PICALM-208	ENST00000528256	RNF10	Q8N5U6	811 aa	Known RBP	4.88	□□□□□ -1.63
PICALM-208	ENST00000528256	ZNF321P	Q8N8H1	164 aa		4.88	□□□□□ -1.63
PICALM-208	ENST00000528256	OR2L5	Q8NG80	312 aa		4.88	□□□□□ -1.63
PICALM-208	ENST00000528256	NUBPL	Q8TB37	319 aa		4.88	□□□□□ -1.63
PICALM-208	ENST00000528256	SLC22A8	Q8TCC7	542 aa		4.88	□□□□□ -1.63
PICALM-208	ENST00000528256	FIG4	Q92562	907 aa		4.88	□□□□□ -1.63
PICALM-208	ENST00000528256	MS4A6E	Q96DS6	147 aa		4.88	□□□□□ -1.63
PICALM-208	ENST00000528256	SPACA9	Q96E40	222 aa	Predicted RBP	4.88	□□□□□ -1.63
PICALM-208	ENST00000528256	JSRP1	Q96MG2	331 aa	Predicted RBP	4.88	□□□□□ -1.63
PICALM-208	ENST00000528256	RUNDC3B	Q96NL0	473 aa		4.88	□□□□□ -1.63
PICALM-208	ENST00000528256	QRFPR	Q96P65	431 aa		4.88	□□□□□ -1.63
PICALM-208	ENST00000528256	SERINC2	Q96SA4	455 aa		4.88	□□□□□ -1.63
PICALM-208	ENST00000528256	DOHH	Q9BU89	302 aa		4.88	□□□□□ -1.63
PICALM-208	ENST00000528256	TSPY26P	Q9H489	355 aa		4.88	□□□□□ -1.63
PICALM-208	ENST00000528256	ESRP2	Q9H6T0	727 aa	Known RBP	4.88	□□□□□ -1.63
PICALM-208	ENST00000528256	XAB2	Q9HCS7	855 aa	Known RBP	4.88	□□□□□ -1.63
PICALM-208	ENST00000528256	IARS2	Q9NSE4	1012 aa	Known RBP	4.88	□□□□□ -1.63
PICALM-208	ENST00000528256	CNIH4	Q9P003	139 aa		4.88	□□□□□ -1.63
PICALM-208	ENST00000528256	SLC22A14	Q9Y267	594 aa		4.88	□□□□□ -1.63
PICALM-208	ENST00000528256	MAP1A	P78559	2803 aa	Predicted RBP	4.88	□□□□□ -1.63
PICALM-208	ENST00000528256	NSD1	Q96L73	2696 aa	Predicted RBP	4.88	□□□□□ -1.63
PICALM-208	ENST00000528256	ARHGAP21	Q5T5U3	1957 aa		4.87	□□□□□ -1.63
PICALM-208	ENST00000528256		A0A0B4J293	547 aa		4.87	□□□□□ -1.63
PICALM-208	ENST00000528256		A0A0G2JPF8	293 aa		4.87	□□□□□ -1.63
PICALM-208	ENST00000528256		A0A1W2PPR1	153 aa		4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	TRIM64	A6NGJ6	449 aa		4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	TRIM64B	A6NI03	449 aa		4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	HNRNPCL3	B7ZW38	293 aa		4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	PHF1	O43189	567 aa	Predicted RBP	4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	HNRNPCL1	O60812	293 aa	Known RBP	4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	TRAPPC6A	O75865	159 aa		4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	ETHE1	O95571	254 aa		4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	C1QA	P02745	245 aa		4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	HNRNPCL4	P0DMR1	293 aa		4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	C1GALT1C1L	P0DN25	315 aa		4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	GNAZ	P19086	355 aa		4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	GDF1	P27539	372 aa		4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	GGT5	P36269	586 aa		4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	MSH2	P43246	934 aa		4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	CDK9	P50750	372 aa	Known RBP	4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	MTTP	P55157	894 aa		4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	EEF1A1	P68104	462 aa	Known RBP	4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	RPP30	P78346	268 aa	Known RBP	4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	TGM3	Q08188	693 aa		4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	ARL16	Q0P5N6	197 aa		4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	RNPS1	Q15287	305 aa	Known RBP	4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	TRIP13	Q15645	432 aa	Predicted RBP	4.87	□□□□□ -1.63

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