RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 PIP5K1CO60331 668 aa17.14■□□□□ 0.33
SMPD1-203ENST00000527275 STSP08842 583 aa17.14■□□□□ 0.33
SMPD1-203ENST00000527275 FPR3P25089 353 aa17.14■□□□□ 0.33
SMPD1-203ENST00000527275 ACVR2AP27037 513 aa17.14■□□□□ 0.33
SMPD1-203ENST00000527275 LCN1P31025 176 aa17.14■□□□□ 0.33
SMPD1-203ENST00000527275 SMSP52788 366 aa17.14■□□□□ 0.33
SMPD1-203ENST00000527275 RRADP55042 308 aa17.14■□□□□ 0.33
SMPD1-203ENST00000527275 ST3GAL4Q11206 333 aa17.14■□□□□ 0.33
SMPD1-203ENST00000527275 ZNF791Q3KP31 576 aaPredicted RBP17.14■□□□□ 0.33
SMPD1-203ENST00000527275 TMEM156Q8N614 296 aa17.14■□□□□ 0.33
SMPD1-203ENST00000527275 ZNF527Q8NB42 609 aa17.14■□□□□ 0.33
SMPD1-203ENST00000527275 OR10G3Q8NGC4 313 aa17.14■□□□□ 0.33
SMPD1-203ENST00000527275 TEX47Q8TBZ9 253 aa17.14■□□□□ 0.33
SMPD1-203ENST00000527275 RNF217Q8TC41 542 aa17.14■□□□□ 0.33
SMPD1-203ENST00000527275 RTN4RQ9BZR6 473 aa17.14■□□□□ 0.33
SMPD1-203ENST00000527275 KRCC1Q9NPI7 259 aaPredicted RBP17.14■□□□□ 0.33
SMPD1-203ENST00000527275 POLHQ9Y253 713 aa17.14■□□□□ 0.33
SMPD1-203ENST00000527275 EFCAB10A6NFE3 127 aa17.13■□□□□ 0.33
SMPD1-203ENST00000527275 LYPD3O95274 346 aa17.13■□□□□ 0.33
SMPD1-203ENST00000527275 SSR4P51571 173 aa17.13■□□□□ 0.33
SMPD1-203ENST00000527275 EFR3AQ14156 821 aa17.13■□□□□ 0.33
SMPD1-203ENST00000527275 FGFBP1Q14512 234 aa17.13■□□□□ 0.33
SMPD1-203ENST00000527275 NTRK2Q16620 822 aa17.13■□□□□ 0.33
SMPD1-203ENST00000527275 ZSWIM7Q19AV6 140 aa17.13■□□□□ 0.33
SMPD1-203ENST00000527275 OPN5Q6U736 354 aa17.13■□□□□ 0.33
SMPD1-203ENST00000527275 IL20RBQ6UXL0 311 aa17.13■□□□□ 0.33
SMPD1-203ENST00000527275 RNF113BQ8IZP6 322 aaKnown RBP17.13■□□□□ 0.33
SMPD1-203ENST00000527275 GALNT16Q8N428 558 aa17.13■□□□□ 0.33
SMPD1-203ENST00000527275 GATSQ8NAP1 163 aa17.13■□□□□ 0.33
SMPD1-203ENST00000527275 RAB2BQ8WUD1 216 aa17.13■□□□□ 0.33
SMPD1-203ENST00000527275 ASB15Q8WXK1 588 aa17.13■□□□□ 0.33
SMPD1-203ENST00000527275 POLDIP3Q9BY77 421 aaKnown RBP17.13■□□□□ 0.33
SMPD1-203ENST00000527275 SLC25A19Q9HC21 320 aa17.13■□□□□ 0.33
SMPD1-203ENST00000527275 DNAJB12Q9NXW2 375 aaKnown RBP17.13■□□□□ 0.33
SMPD1-203ENST00000527275 STMN3Q9NZ72 180 aa17.13■□□□□ 0.33
SMPD1-203ENST00000527275 SERINC4A6NH21 518 aa17.13■□□□□ 0.33
SMPD1-203ENST00000527275 KLF4O43474 513 aa17.13■□□□□ 0.33
SMPD1-203ENST00000527275 TLX2O43763 284 aaPredicted RBP17.13■□□□□ 0.33
SMPD1-203ENST00000527275 PSMB9P28065 219 aa17.13■□□□□ 0.33
SMPD1-203ENST00000527275 HOXD11P31277 338 aaPredicted RBP17.13■□□□□ 0.33
SMPD1-203ENST00000527275 EVI2BP34910 448 aa17.13■□□□□ 0.33
SMPD1-203ENST00000527275 GPR4P46093 362 aa17.13■□□□□ 0.33
SMPD1-203ENST00000527275 PCYT1AP49585 367 aa17.13■□□□□ 0.33
SMPD1-203ENST00000527275 CD226Q15762 336 aa17.13■□□□□ 0.33
SMPD1-203ENST00000527275 TMEM201Q5SNT2 666 aa17.13■□□□□ 0.33
SMPD1-203ENST00000527275 ZNF468Q5VIY5 522 aaPredicted RBP17.13■□□□□ 0.33
SMPD1-203ENST00000527275 SLC27A4Q6P1M0 643 aa17.13■□□□□ 0.33
SMPD1-203ENST00000527275 ZNF613Q6PF04 617 aa17.13■□□□□ 0.33
SMPD1-203ENST00000527275 WDR88Q6ZMY6 472 aa17.13■□□□□ 0.33
SMPD1-203ENST00000527275 POGLUT1Q8NBL1 392 aa17.13■□□□□ 0.33
SMPD1-203ENST00000527275 ZFAND2BQ8WV99 257 aa17.13■□□□□ 0.33
SMPD1-203ENST00000527275 HGDQ93099 445 aa17.13■□□□□ 0.33
SMPD1-203ENST00000527275 ARSGQ96EG1 525 aa17.13■□□□□ 0.33
SMPD1-203ENST00000527275 ANKRD10Q9NXR5 420 aa17.13■□□□□ 0.33
SMPD1-203ENST00000527275 CNOT2Q9NZN8 540 aaKnown RBP17.13■□□□□ 0.33
SMPD1-203ENST00000527275 TRIM64BA6NI03 449 aa17.12■□□□□ 0.33
SMPD1-203ENST00000527275 A6NL46 340 aa17.12■□□□□ 0.33
SMPD1-203ENST00000527275 FADS1O60427 444 aa17.12■□□□□ 0.33
SMPD1-203ENST00000527275 LCKP06239 509 aa17.12■□□□□ 0.33
SMPD1-203ENST00000527275 NGFRP08138 427 aa17.12■□□□□ 0.33
SMPD1-203ENST00000527275 PTNP21246 168 aa17.12■□□□□ 0.33
SMPD1-203ENST00000527275 EIF2S3P41091 472 aaKnown RBP17.12■□□□□ 0.33
SMPD1-203ENST00000527275 ACAA2P42765 397 aaKnown RBP17.12■□□□□ 0.33
SMPD1-203ENST00000527275 UBE2UQ5VVX9 321 aa17.12■□□□□ 0.33
SMPD1-203ENST00000527275 NUP54Q7Z3B4 507 aa17.12■□□□□ 0.33
SMPD1-203ENST00000527275 SPACA3Q8IXA5 215 aa17.12■□□□□ 0.33
SMPD1-203ENST00000527275 OR8D4Q8NGM9 314 aa17.12■□□□□ 0.33
SMPD1-203ENST00000527275 GRHL3Q8TE85 626 aa17.12■□□□□ 0.33
SMPD1-203ENST00000527275 TMEM239Q8WW34 195 aa17.12■□□□□ 0.33
SMPD1-203ENST00000527275 TMCO6Q96DC7 493 aa17.12■□□□□ 0.33
SMPD1-203ENST00000527275 TBL1XR1Q9BZK7 514 aa17.12■□□□□ 0.33
SMPD1-203ENST00000527275 DNAJC27Q9NZQ0 273 aa17.12■□□□□ 0.33
SMPD1-203ENST00000527275 TEKT2Q9UIF3 430 aa17.12■□□□□ 0.33
SMPD1-203ENST00000527275 SSUH2Q9Y2M2 353 aa17.12■□□□□ 0.33
SMPD1-203ENST00000527275 CHD8Q9HCK8 2581 aa17.12■□□□□ 0.33
SMPD1-203ENST00000527275 PRKYO43930 277 aa17.12■□□□□ 0.33
SMPD1-203ENST00000527275 CSTAP01040 98 aa17.12■□□□□ 0.33
SMPD1-203ENST00000527275 CCNA2P20248 432 aa17.12■□□□□ 0.33
SMPD1-203ENST00000527275 SNAPC1Q16533 368 aa17.12■□□□□ 0.33
SMPD1-203ENST00000527275 OCLNQ16625 522 aa17.12■□□□□ 0.33
SMPD1-203ENST00000527275 NDUFAF6Q330K2 333 aa17.12■□□□□ 0.33
SMPD1-203ENST00000527275 MARCH3Q86UD3 253 aa17.12■□□□□ 0.33
SMPD1-203ENST00000527275 ANKRD13BQ86YJ7 626 aa17.12■□□□□ 0.33
SMPD1-203ENST00000527275 BEST3Q8N1M1 668 aa17.12■□□□□ 0.33
SMPD1-203ENST00000527275 FAM26EQ8N5C1 309 aa17.12■□□□□ 0.33
SMPD1-203ENST00000527275 PHOSPHO1Q8TCT1 267 aa17.12■□□□□ 0.33
SMPD1-203ENST00000527275 TTC9Q92623 222 aa17.12■□□□□ 0.33
SMPD1-203ENST00000527275 FCGR1BQ92637 280 aa17.12■□□□□ 0.33
SMPD1-203ENST00000527275 OSTF1Q92882 214 aa17.12■□□□□ 0.33
SMPD1-203ENST00000527275 DCUN1D5Q9BTE7 237 aa17.12■□□□□ 0.33
SMPD1-203ENST00000527275 HEATR5AQ86XA9 2040 aa17.11■□□□□ 0.33
SMPD1-203ENST00000527275 C17orf51A8MQB3 221 aa17.11■□□□□ 0.33
SMPD1-203ENST00000527275 ALG1L2C9J202 215 aa17.11■□□□□ 0.33
SMPD1-203ENST00000527275 ADAM11O75078 769 aa17.11■□□□□ 0.33
SMPD1-203ENST00000527275 SLC15A1P46059 708 aa17.11■□□□□ 0.33
SMPD1-203ENST00000527275 EFNB1P98172 346 aa17.11■□□□□ 0.33
SMPD1-203ENST00000527275 TBCEQ15813 527 aaPredicted RBP17.11■□□□□ 0.33
SMPD1-203ENST00000527275 DEFB109BQ30KR1 87 aa17.11■□□□□ 0.33
SMPD1-203ENST00000527275 FNDC7Q5VTL7 733 aa17.11■□□□□ 0.33
SMPD1-203ENST00000527275 BICRALQ6AI39 1079 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms