RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 UBL4AP11441 157 aa12.51□□□□□ -0.41
CPSF1-201ENST00000526271 PGM1P36871 562 aa12.51□□□□□ -0.41
CPSF1-201ENST00000526271 CASP9P55211 416 aa12.51□□□□□ -0.41
CPSF1-201ENST00000526271 CHRNEQ04844 493 aa12.51□□□□□ -0.41
CPSF1-201ENST00000526271 ARL13AQ5H913 290 aaPredicted RBP12.51□□□□□ -0.41
CPSF1-201ENST00000526271 CFAP157Q5JU67 520 aa12.51□□□□□ -0.41
CPSF1-201ENST00000526271 HHATQ5VTY9 493 aa12.51□□□□□ -0.41
CPSF1-201ENST00000526271 NUDCD3Q8IVD9 361 aa12.51□□□□□ -0.41
CPSF1-201ENST00000526271 CLECL1Q8IZS7 167 aa12.51□□□□□ -0.41
CPSF1-201ENST00000526271 MUC15Q8N387 334 aa12.51□□□□□ -0.41
CPSF1-201ENST00000526271 ZNF614Q8N883 585 aa12.51□□□□□ -0.41
CPSF1-201ENST00000526271 ADAMTS15Q8TE58 950 aa12.51□□□□□ -0.41
CPSF1-201ENST00000526271 CHMP6Q96FZ7 201 aa12.51□□□□□ -0.41
CPSF1-201ENST00000526271 USB1Q9BQ65 265 aaKnown RBP12.51□□□□□ -0.41
CPSF1-201ENST00000526271 C19orf24Q9BVV8 132 aa12.51□□□□□ -0.41
CPSF1-201ENST00000526271 PRR14Q9BWN1 585 aa12.51□□□□□ -0.41
CPSF1-201ENST00000526271 HOXD1Q9GZZ0 328 aa12.51□□□□□ -0.41
CPSF1-201ENST00000526271 HHATLQ9HCP6 504 aa12.51□□□□□ -0.41
CPSF1-201ENST00000526271 CTPS2Q9NRF8 586 aa12.51□□□□□ -0.41
CPSF1-201ENST00000526271 FAM53CQ9NYF3 392 aa12.51□□□□□ -0.41
CPSF1-201ENST00000526271 CDC42EP3Q9UKI2 254 aa12.51□□□□□ -0.41
CPSF1-201ENST00000526271 MKLN1Q9UL63 735 aa12.51□□□□□ -0.41
CPSF1-201ENST00000526271 TMED5Q9Y3A6 229 aa12.51□□□□□ -0.41
CPSF1-201ENST00000526271 TRAF6Q9Y4K3 522 aa12.51□□□□□ -0.41
CPSF1-201ENST00000526271 WDR91A4D1P6 747 aa12.5□□□□□ -0.41
CPSF1-201ENST00000526271 CLDN24A6NM45 220 aa12.5□□□□□ -0.41
CPSF1-201ENST00000526271 GTPBP1O00178 669 aaKnown RBP12.5□□□□□ -0.41
CPSF1-201ENST00000526271 NPHS1O60500 1241 aa12.5□□□□□ -0.41
CPSF1-201ENST00000526271 SCN2BO60939 215 aa12.5□□□□□ -0.41
CPSF1-201ENST00000526271 PEX11AO75192 247 aa12.5□□□□□ -0.41
CPSF1-201ENST00000526271 NEFHP12036 1026 aa12.5□□□□□ -0.41
CPSF1-201ENST00000526271 ATP6V1C1P21283 382 aa12.5□□□□□ -0.41
CPSF1-201ENST00000526271 SLC7A1P30825 629 aa12.5□□□□□ -0.41
CPSF1-201ENST00000526271 ASMTP46597 345 aa12.5□□□□□ -0.41
CPSF1-201ENST00000526271 CCR4P51679 360 aa12.5□□□□□ -0.41
CPSF1-201ENST00000526271 SLC16A1P53985 500 aa12.5□□□□□ -0.41
CPSF1-201ENST00000526271 PHC1P78364 1004 aa12.5□□□□□ -0.41
CPSF1-201ENST00000526271 H3F3AP84243 136 aa12.5□□□□□ -0.41
CPSF1-201ENST00000526271 PDK3Q15120 406 aa12.5□□□□□ -0.41
CPSF1-201ENST00000526271 SYT14P1Q58G82 188 aa12.5□□□□□ -0.41
CPSF1-201ENST00000526271 C6orf136Q5SQH8 315 aa12.5□□□□□ -0.41
CPSF1-201ENST00000526271 AP1ARQ63HQ0 302 aa12.5□□□□□ -0.41
CPSF1-201ENST00000526271 C3orf33Q6P1S2 294 aa12.5□□□□□ -0.41
CPSF1-201ENST00000526271 P2RY8Q86VZ1 359 aa12.5□□□□□ -0.41
CPSF1-201ENST00000526271 ADGRG3Q86Y34 549 aa12.5□□□□□ -0.41
CPSF1-201ENST00000526271 TMCO5AQ8N6Q1 288 aa12.5□□□□□ -0.41
CPSF1-201ENST00000526271 OR56A1Q8NGH5 318 aa12.5□□□□□ -0.41
CPSF1-201ENST00000526271 SFXN5Q8TD22 340 aa12.5□□□□□ -0.41
CPSF1-201ENST00000526271 MGARPQ8TDB4 240 aa12.5□□□□□ -0.41
CPSF1-201ENST00000526271 BHLHE41Q9C0J9 482 aaPredicted RBP12.5□□□□□ -0.41
CPSF1-201ENST00000526271 NMUR2Q9GZQ4 415 aa12.5□□□□□ -0.41
CPSF1-201ENST00000526271 ZNF350Q9GZX5 532 aa12.5□□□□□ -0.41
CPSF1-201ENST00000526271 ACER3Q9NUN7 267 aa12.5□□□□□ -0.41
CPSF1-201ENST00000526271 MALT1Q9UDY8 824 aa12.5□□□□□ -0.41
CPSF1-201ENST00000526271 UBTFL6P0CB48 400 aaPredicted RBP12.49□□□□□ -0.41
CPSF1-201ENST00000526271 IMPDH2P12268 514 aa12.49□□□□□ -0.41
CPSF1-201ENST00000526271 DDX5P17844 614 aaKnown RBP12.49□□□□□ -0.41
CPSF1-201ENST00000526271 PTAFRP25105 342 aa12.49□□□□□ -0.41
CPSF1-201ENST00000526271 SERPINB5P36952 375 aa12.49□□□□□ -0.41
CPSF1-201ENST00000526271 MERTKQ12866 999 aa12.49□□□□□ -0.41
CPSF1-201ENST00000526271 CBFBQ13951 182 aa12.49□□□□□ -0.41
CPSF1-201ENST00000526271 GPR68Q15743 365 aa12.49□□□□□ -0.41
CPSF1-201ENST00000526271 SWI5Q1ZZU3 235 aa12.49□□□□□ -0.41
CPSF1-201ENST00000526271 C9orf135Q5VTT2 229 aa12.49□□□□□ -0.41
CPSF1-201ENST00000526271 IL23RQ5VWK5 629 aa12.49□□□□□ -0.41
CPSF1-201ENST00000526271 TYW3Q6IPR3 259 aaKnown RBP12.49□□□□□ -0.41
CPSF1-201ENST00000526271 SLC22A25Q6T423 547 aa12.49□□□□□ -0.41
CPSF1-201ENST00000526271 CLEC2AQ6UVW9 174 aa12.49□□□□□ -0.41
CPSF1-201ENST00000526271 ZCCHC23Q6ZST2 131 aa12.49□□□□□ -0.41
CPSF1-201ENST00000526271 R3HCC1LQ7Z5L2 792 aaKnown RBP12.49□□□□□ -0.41
CPSF1-201ENST00000526271 MTDHQ86UE4 582 aaKnown RBP12.49□□□□□ -0.41
CPSF1-201ENST00000526271 ZNF100Q8IYN0 542 aa12.49□□□□□ -0.41
CPSF1-201ENST00000526271 ARFGAP2Q8N6H7 521 aa12.49□□□□□ -0.41
CPSF1-201ENST00000526271 TOR1AIP2Q8NFQ8 470 aa12.49□□□□□ -0.41
CPSF1-201ENST00000526271 AGR3Q8TD06 166 aa12.49□□□□□ -0.41
CPSF1-201ENST00000526271 ST8SIA1Q92185 356 aa12.49□□□□□ -0.41
CPSF1-201ENST00000526271 MSI2Q96DH6 328 aaKnown RBP12.49□□□□□ -0.41
CPSF1-201ENST00000526271 MUCL1Q96DR8 90 aa12.49□□□□□ -0.41
CPSF1-201ENST00000526271 SORCS2Q96PQ0 1159 aa12.49□□□□□ -0.41
CPSF1-201ENST00000526271 KCNK17Q96T54 332 aa12.49□□□□□ -0.41
CPSF1-201ENST00000526271 PAIP2Q9BPZ3 127 aaKnown RBP12.49□□□□□ -0.41
CPSF1-201ENST00000526271 TRMOQ9BU70 441 aa12.49□□□□□ -0.41
CPSF1-201ENST00000526271 SLC7A10Q9NS82 523 aa12.49□□□□□ -0.41
CPSF1-201ENST00000526271 IGHV4-61A0A0C4DH41 118 aa12.48□□□□□ -0.41
CPSF1-201ENST00000526271 ATP6V1G2-DDX39BF2Z307 99 aa12.48□□□□□ -0.41
CPSF1-201ENST00000526271 M0R1B8 84 aa12.48□□□□□ -0.41
CPSF1-201ENST00000526271 SULT2B1O00204 365 aa12.48□□□□□ -0.41
CPSF1-201ENST00000526271 SLC25A16P16260 332 aa12.48□□□□□ -0.41
CPSF1-201ENST00000526271 BGNP21810 368 aa12.48□□□□□ -0.41
CPSF1-201ENST00000526271 HPCAL1P37235 193 aa12.48□□□□□ -0.41
CPSF1-201ENST00000526271 FABP6P51161 128 aa12.48□□□□□ -0.41
CPSF1-201ENST00000526271 CHI3L2Q15782 390 aa12.48□□□□□ -0.41
CPSF1-201ENST00000526271 TSPO2Q5TGU0 170 aa12.48□□□□□ -0.41
CPSF1-201ENST00000526271 FRRS1Q6ZNA5 592 aa12.48□□□□□ -0.41
CPSF1-201ENST00000526271 DDIASQ8IXT1 998 aa12.48□□□□□ -0.41
CPSF1-201ENST00000526271 ZIC4Q8N9L1 334 aa12.48□□□□□ -0.41
CPSF1-201ENST00000526271 FAM168AQ92567 244 aa12.48□□□□□ -0.41
CPSF1-201ENST00000526271 APH1AQ96BI3 265 aa12.48□□□□□ -0.41
CPSF1-201ENST00000526271 C1orf159Q96HA4 380 aa12.48□□□□□ -0.41
CPSF1-201ENST00000526271 ADAD1Q96M93 576 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms