RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 NFKBIDQ8NI38 313 aa11.43□□□□□ -0.58
TRAPPC4-205ENST00000525079 SLC25A43Q8WUT9 341 aaPredicted RBP11.43□□□□□ -0.58
TRAPPC4-205ENST00000525079 PSD2Q9BQI7 771 aa11.43□□□□□ -0.58
TRAPPC4-205ENST00000525079 IKZF5Q9H5V7 419 aa11.43□□□□□ -0.58
TRAPPC4-205ENST00000525079 A4GALTQ9NPC4 353 aa11.43□□□□□ -0.58
TRAPPC4-205ENST00000525079 THUMPD1Q9NXG2 353 aaKnown RBP11.43□□□□□ -0.58
TRAPPC4-205ENST00000525079 ST6GALNAC2Q9UJ37 374 aa11.43□□□□□ -0.58
TRAPPC4-205ENST00000525079 OSGIN1Q9UJX0 560 aa11.43□□□□□ -0.58
TRAPPC4-205ENST00000525079 ZNF232Q9UNY5 417 aa11.43□□□□□ -0.58
TRAPPC4-205ENST00000525079 CHST2Q9Y4C5 530 aa11.43□□□□□ -0.58
TRAPPC4-205ENST00000525079 SPIN1Q9Y657 262 aaPredicted RBP11.43□□□□□ -0.58
TRAPPC4-205ENST00000525079 CSMD2Q7Z408 3487 aa11.43□□□□□ -0.58
TRAPPC4-205ENST00000525079 ANKRD17O75179 2603 aaKnown RBP11.43□□□□□ -0.58
TRAPPC4-205ENST00000525079 HRNRQ86YZ3 2850 aaPredicted RBP11.42□□□□□ -0.58
TRAPPC4-205ENST00000525079 ANKHD1Q8IWZ3 2542 aaKnown RBP11.42□□□□□ -0.58
TRAPPC4-205ENST00000525079 TRBV5-3A0A0A0MS03 114 aa11.42□□□□□ -0.58
TRAPPC4-205ENST00000525079 A0A1W2PP18 115 aa11.42□□□□□ -0.58
TRAPPC4-205ENST00000525079 FRS3O43559 492 aa11.42□□□□□ -0.58
TRAPPC4-205ENST00000525079 CYTIPO60759 359 aa11.42□□□□□ -0.58
TRAPPC4-205ENST00000525079 PGM3O95394 542 aa11.42□□□□□ -0.58
TRAPPC4-205ENST00000525079 THBDP07204 575 aa11.42□□□□□ -0.58
TRAPPC4-205ENST00000525079 BMP2P12643 396 aa11.42□□□□□ -0.58
TRAPPC4-205ENST00000525079 EDNRAP25101 427 aa11.42□□□□□ -0.58
TRAPPC4-205ENST00000525079 ACAA2P42765 397 aaKnown RBP11.42□□□□□ -0.58
TRAPPC4-205ENST00000525079 SLC1A3P43003 542 aa11.42□□□□□ -0.58
TRAPPC4-205ENST00000525079 PCYT1AP49585 367 aa11.42□□□□□ -0.58
TRAPPC4-205ENST00000525079 ART1P52961 327 aa11.42□□□□□ -0.58
TRAPPC4-205ENST00000525079 CSNK2A1P68400 391 aaPredicted RBP11.42□□□□□ -0.58
TRAPPC4-205ENST00000525079 HOXC5Q00444 222 aa11.42□□□□□ -0.58
TRAPPC4-205ENST00000525079 LARS2Q15031 903 aaKnown RBP11.42□□□□□ -0.58
TRAPPC4-205ENST00000525079 ZNF311Q5JNZ3 666 aa11.42□□□□□ -0.58
TRAPPC4-205ENST00000525079 GCNT6Q5T4J0 391 aa11.42□□□□□ -0.58
TRAPPC4-205ENST00000525079 ALKBH2Q6NS38 261 aa11.42□□□□□ -0.58
TRAPPC4-205ENST00000525079 DLEU7Q6UYE1 221 aa11.42□□□□□ -0.58
TRAPPC4-205ENST00000525079 TFAP2EQ6VUC0 442 aa11.42□□□□□ -0.58
TRAPPC4-205ENST00000525079 MTDHQ86UE4 582 aaKnown RBP11.42□□□□□ -0.58
TRAPPC4-205ENST00000525079 CXorf67Q86X51 503 aaPredicted RBP11.42□□□□□ -0.58
TRAPPC4-205ENST00000525079 ZNF440Q8IYI8 595 aa11.42□□□□□ -0.58
TRAPPC4-205ENST00000525079 PIK3IP1Q96FE7 263 aa11.42□□□□□ -0.58
TRAPPC4-205ENST00000525079 SPATA9Q9BWV2 254 aa11.42□□□□□ -0.58
TRAPPC4-205ENST00000525079 TMEM120AQ9BXJ8 343 aa11.42□□□□□ -0.58
TRAPPC4-205ENST00000525079 RSPO3Q9BXY4 272 aaPredicted RBP11.42□□□□□ -0.58
TRAPPC4-205ENST00000525079 RABEP2Q9H5N1 569 aa11.42□□□□□ -0.58
TRAPPC4-205ENST00000525079 ZNF385DQ9H6B1 395 aa11.42□□□□□ -0.58
TRAPPC4-205ENST00000525079 PLEKHF2Q9H8W4 249 aa11.42□□□□□ -0.58
TRAPPC4-205ENST00000525079 CACYBPQ9HB71 228 aaKnown RBP11.42□□□□□ -0.58
TRAPPC4-205ENST00000525079 ZNF226Q9NYT6 803 aa11.42□□□□□ -0.58
TRAPPC4-205ENST00000525079 KLHL9Q9P2J3 617 aa11.42□□□□□ -0.58
TRAPPC4-205ENST00000525079 PRSS50Q9UI38 385 aa11.42□□□□□ -0.58
TRAPPC4-205ENST00000525079 TRIM33Q9UPN9 1127 aa11.42□□□□□ -0.58
TRAPPC4-205ENST00000525079 ZC3H12DA2A288 527 aaKnown RBP11.41□□□□□ -0.58
TRAPPC4-205ENST00000525079 DEFB108AA8MXU0 73 aa11.41□□□□□ -0.58
TRAPPC4-205ENST00000525079 ZNF814B7Z6K7 855 aa11.41□□□□□ -0.58
TRAPPC4-205ENST00000525079 FAAHO00519 579 aa11.41□□□□□ -0.58
TRAPPC4-205ENST00000525079 RAMP1O60894 148 aa11.41□□□□□ -0.58
TRAPPC4-205ENST00000525079 PMS2P2O95744 297 aa11.41□□□□□ -0.58
TRAPPC4-205ENST00000525079 ADAP00813 363 aa11.41□□□□□ -0.58
TRAPPC4-205ENST00000525079 THBS1P07996 1170 aa11.41□□□□□ -0.58
TRAPPC4-205ENST00000525079 ARAFP10398 606 aa11.41□□□□□ -0.58
TRAPPC4-205ENST00000525079 IMPDH2P12268 514 aa11.41□□□□□ -0.58
TRAPPC4-205ENST00000525079 UQCRBP14927 111 aa11.41□□□□□ -0.58
TRAPPC4-205ENST00000525079 CRYGSP22914 178 aa11.41□□□□□ -0.58
TRAPPC4-205ENST00000525079 HTR3AP46098 478 aa11.41□□□□□ -0.58
TRAPPC4-205ENST00000525079 IRX1P78414 480 aaPredicted RBP11.41□□□□□ -0.58
TRAPPC4-205ENST00000525079 BNIP2Q12982 314 aa11.41□□□□□ -0.58
TRAPPC4-205ENST00000525079 TESK1Q15569 626 aa11.41□□□□□ -0.58
TRAPPC4-205ENST00000525079 SERPINA11Q86U17 422 aa11.41□□□□□ -0.58
TRAPPC4-205ENST00000525079 RETREG3Q86VR2 466 aa11.41□□□□□ -0.58
TRAPPC4-205ENST00000525079 CCDC103Q8IW40 242 aa11.41□□□□□ -0.58
TRAPPC4-205ENST00000525079 BBS10Q8TAM1 723 aa11.41□□□□□ -0.58
TRAPPC4-205ENST00000525079 STON2Q8WXE9 905 aa11.41□□□□□ -0.58
TRAPPC4-205ENST00000525079 DDIT4LQ96D03 193 aa11.41□□□□□ -0.58
TRAPPC4-205ENST00000525079 ACTR6Q9GZN1 396 aa11.41□□□□□ -0.58
TRAPPC4-205ENST00000525079 ADAM19Q9H013 955 aa11.41□□□□□ -0.58
TRAPPC4-205ENST00000525079 BCO1Q9HAY6 547 aa11.41□□□□□ -0.58
TRAPPC4-205ENST00000525079 GP6Q9HCN6 339 aa11.41□□□□□ -0.58
TRAPPC4-205ENST00000525079 BCL2L10Q9HD36 194 aa11.41□□□□□ -0.58
TRAPPC4-205ENST00000525079 FGFR1OP2Q9NVK5 253 aa11.41□□□□□ -0.58
TRAPPC4-205ENST00000525079 TMEM45AQ9NWC5 275 aa11.41□□□□□ -0.58
TRAPPC4-205ENST00000525079 TMEM181Q9P2C4 612 aa11.41□□□□□ -0.58
TRAPPC4-205ENST00000525079 LEF1Q9UJU2 399 aaPredicted RBP11.41□□□□□ -0.58
TRAPPC4-205ENST00000525079 IFT52Q9Y366 437 aa11.41□□□□□ -0.58
TRAPPC4-205ENST00000525079 NDUFAF1Q9Y375 327 aa11.41□□□□□ -0.58
TRAPPC4-205ENST00000525079 HDGFL3Q9Y3E1 203 aa11.41□□□□□ -0.58
TRAPPC4-205ENST00000525079 EVPLLA8MZ36 301 aa11.4□□□□□ -0.58
TRAPPC4-205ENST00000525079 ANGPT2O15123 496 aa11.4□□□□□ -0.58
TRAPPC4-205ENST00000525079 GCM2O75603 506 aaPredicted RBP11.4□□□□□ -0.58
TRAPPC4-205ENST00000525079 VIMP08670 466 aaKnown RBP11.4□□□□□ -0.58
TRAPPC4-205ENST00000525079 FPR1P21462 350 aa11.4□□□□□ -0.58
TRAPPC4-205ENST00000525079 PPIBP23284 216 aaKnown RBP11.4□□□□□ -0.58
TRAPPC4-205ENST00000525079 DNASE1P24855 282 aa11.4□□□□□ -0.58
TRAPPC4-205ENST00000525079 CXCR1P25024 350 aa11.4□□□□□ -0.58
TRAPPC4-205ENST00000525079 CLK1P49759 484 aaKnown RBP11.4□□□□□ -0.58
TRAPPC4-205ENST00000525079 COPZ1P61923 177 aa11.4□□□□□ -0.58
TRAPPC4-205ENST00000525079 CDK6Q00534 326 aa11.4□□□□□ -0.58
TRAPPC4-205ENST00000525079 GUCY1A3Q02108 690 aa11.4□□□□□ -0.58
TRAPPC4-205ENST00000525079 SELPLGQ14242 412 aa11.4□□□□□ -0.58
TRAPPC4-205ENST00000525079 RUNDC3AQ59EK9 446 aa11.4□□□□□ -0.58
TRAPPC4-205ENST00000525079 RNF220Q5VTB9 566 aa11.4□□□□□ -0.58
TRAPPC4-205ENST00000525079 WBP2NLQ6ICG8 309 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms