RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 NDUFA7O95182 113 aa5.92□□□□□ -1.46
NEDD8-203ENST00000524927 FTH1P02794 183 aa5.92□□□□□ -1.46
NEDD8-203ENST00000524927 ZNF708P17019 499 aa5.92□□□□□ -1.46
NEDD8-203ENST00000524927 NAGAP17050 411 aa5.92□□□□□ -1.46
NEDD8-203ENST00000524927 PCGF2P35227 344 aa5.92□□□□□ -1.46
NEDD8-203ENST00000524927 MFAP4P55083 255 aa5.92□□□□□ -1.46
NEDD8-203ENST00000524927 SKP1P63208 163 aa5.92□□□□□ -1.46
NEDD8-203ENST00000524927 DOC2AQ14183 400 aa5.92□□□□□ -1.46
NEDD8-203ENST00000524927 P2RY6Q15077 328 aa5.92□□□□□ -1.46
NEDD8-203ENST00000524927 ASTE1Q2TB18 679 aaPredicted RBP5.92□□□□□ -1.46
NEDD8-203ENST00000524927 CDONQ4KMG0 1287 aa5.92□□□□□ -1.46
NEDD8-203ENST00000524927 PIGGQ5H8A4 983 aa5.92□□□□□ -1.46
NEDD8-203ENST00000524927 TOR1AIP1Q5JTV8 583 aa5.92□□□□□ -1.46
NEDD8-203ENST00000524927 NIPAL1Q6NVV3 410 aa5.92□□□□□ -1.46
NEDD8-203ENST00000524927 TTC23LQ6PF05 361 aa5.92□□□□□ -1.46
NEDD8-203ENST00000524927 C16orf87Q6PH81 154 aa5.92□□□□□ -1.46
NEDD8-203ENST00000524927 Q6ZSV7 163 aa5.92□□□□□ -1.46
NEDD8-203ENST00000524927 CYP4V2Q6ZWL3 525 aaPredicted RBP5.92□□□□□ -1.46
NEDD8-203ENST00000524927 SHFQ7M4L6 423 aa5.92□□□□□ -1.46
NEDD8-203ENST00000524927 POC5Q8NA72 575 aa5.92□□□□□ -1.46
NEDD8-203ENST00000524927 CAMKVQ8NCB2 501 aa5.92□□□□□ -1.46
NEDD8-203ENST00000524927 FAM83FQ8NEG4 500 aaPredicted RBP5.92□□□□□ -1.46
NEDD8-203ENST00000524927 OR5T3Q8NGG3 340 aa5.92□□□□□ -1.46
NEDD8-203ENST00000524927 OR6K3Q8NGY3 331 aa5.92□□□□□ -1.46
NEDD8-203ENST00000524927 ATL1Q8WXF7 558 aa5.92□□□□□ -1.46
NEDD8-203ENST00000524927 C22orf15Q8WYQ4 148 aa5.92□□□□□ -1.46
NEDD8-203ENST00000524927 RAD51AP1Q96B01 352 aa5.92□□□□□ -1.46
NEDD8-203ENST00000524927 PCGF1Q9BSM1 259 aa5.92□□□□□ -1.46
NEDD8-203ENST00000524927 CLK4Q9HAZ1 481 aaKnown RBP5.92□□□□□ -1.46
NEDD8-203ENST00000524927 HINT3Q9NQE9 182 aaKnown RBP5.92□□□□□ -1.46
NEDD8-203ENST00000524927 HOMER3Q9NSC5 361 aa5.92□□□□□ -1.46
NEDD8-203ENST00000524927 PCSK1NQ9UHG2 260 aa5.92□□□□□ -1.46
NEDD8-203ENST00000524927 ZDHHC2Q9UIJ5 367 aa5.92□□□□□ -1.46
NEDD8-203ENST00000524927 RPUSD1Q9UJJ7 312 aaKnown RBP5.92□□□□□ -1.46
NEDD8-203ENST00000524927 HEATR5BQ9P2D3 2071 aa5.92□□□□□ -1.46
NEDD8-203ENST00000524927 ZNF860A6NHJ4 632 aa5.91□□□□□ -1.46
NEDD8-203ENST00000524927 VCYO14598 125 aa5.91□□□□□ -1.46
NEDD8-203ENST00000524927 CHST10O43529 356 aa5.91□□□□□ -1.46
NEDD8-203ENST00000524927 BUD23O43709 281 aaKnown RBP5.91□□□□□ -1.46
NEDD8-203ENST00000524927 XPNPEP2O43895 674 aa5.91□□□□□ -1.46
NEDD8-203ENST00000524927 CALB1P05937 261 aa5.91□□□□□ -1.46
NEDD8-203ENST00000524927 PNMA6AP0CW24 399 aaPredicted RBP5.91□□□□□ -1.46
NEDD8-203ENST00000524927 DDX5P17844 614 aaKnown RBP5.91□□□□□ -1.46
NEDD8-203ENST00000524927 PGCP20142 388 aa5.91□□□□□ -1.46
NEDD8-203ENST00000524927 IL11P20809 199 aa5.91□□□□□ -1.46
NEDD8-203ENST00000524927 SLC15A1P46059 708 aa5.91□□□□□ -1.46
NEDD8-203ENST00000524927 LHX2P50458 406 aa5.91□□□□□ -1.46
NEDD8-203ENST00000524927 ZBED6P86452 979 aa5.91□□□□□ -1.46
NEDD8-203ENST00000524927 XIAPP98170 497 aa5.91□□□□□ -1.46
NEDD8-203ENST00000524927 ZP4Q12836 540 aa5.91□□□□□ -1.46
NEDD8-203ENST00000524927 HERC3Q15034 1050 aa5.91□□□□□ -1.46
NEDD8-203ENST00000524927 DPYSL2Q16555 572 aa5.91□□□□□ -1.46
NEDD8-203ENST00000524927 CTU2Q2VPK5 515 aaKnown RBP5.91□□□□□ -1.46
NEDD8-203ENST00000524927 GPR33Q49SQ1 333 aa5.91□□□□□ -1.46
NEDD8-203ENST00000524927 RESP18Q5W5W9 173 aa5.91□□□□□ -1.46
NEDD8-203ENST00000524927 GPR139Q6DWJ6 353 aa5.91□□□□□ -1.46
NEDD8-203ENST00000524927 SIGIRRQ6IA17 410 aa5.91□□□□□ -1.46
NEDD8-203ENST00000524927 PQLC2Q6ZP29 291 aa5.91□□□□□ -1.46
NEDD8-203ENST00000524927 CHMP1BQ7LBR1 199 aa5.91□□□□□ -1.46
NEDD8-203ENST00000524927 SSX8Q7RTT4 187 aa5.91□□□□□ -1.46
NEDD8-203ENST00000524927 VN1R4Q7Z5H5 301 aa5.91□□□□□ -1.46
NEDD8-203ENST00000524927 SNX20Q7Z614 316 aa5.91□□□□□ -1.46
NEDD8-203ENST00000524927 YRDCQ86U90 279 aaKnown RBP5.91□□□□□ -1.46
NEDD8-203ENST00000524927 EXOC3L1Q86VI1 746 aa5.91□□□□□ -1.46
NEDD8-203ENST00000524927 SLC22A15Q8IZD6 547 aa5.91□□□□□ -1.46
NEDD8-203ENST00000524927 CLDN19Q8N6F1 224 aa5.91□□□□□ -1.46
NEDD8-203ENST00000524927 OR10G3Q8NGC4 313 aa5.91□□□□□ -1.46
NEDD8-203ENST00000524927 PHF21AQ96BD5 680 aa5.91□□□□□ -1.46
NEDD8-203ENST00000524927 CCDC34Q96HJ3 373 aa5.91□□□□□ -1.46
NEDD8-203ENST00000524927 MCEEQ96PE7 176 aa5.91□□□□□ -1.46
NEDD8-203ENST00000524927 TMEM79Q9BSE2 394 aa5.91□□□□□ -1.46
NEDD8-203ENST00000524927 TEX12Q9BXU0 123 aa5.91□□□□□ -1.46
NEDD8-203ENST00000524927 SLC25A51Q9H1U9 297 aa5.91□□□□□ -1.46
NEDD8-203ENST00000524927 PNO1Q9NRX1 252 aaKnown RBP5.91□□□□□ -1.46
NEDD8-203ENST00000524927 TAS2R16Q9NYV7 291 aa5.91□□□□□ -1.46
NEDD8-203ENST00000524927 MRPL15Q9P015 296 aaKnown RBP5.91□□□□□ -1.46
NEDD8-203ENST00000524927 POU2F3Q9UKI9 436 aa5.91□□□□□ -1.46
NEDD8-203ENST00000524927 MMACHCQ9Y4U1 282 aa5.91□□□□□ -1.46
NEDD8-203ENST00000524927 ARFGEF3Q5TH69 2177 aa5.9□□□□□ -1.46
NEDD8-203ENST00000524927 UQCRHLA0A096LP55 91 aa5.9□□□□□ -1.46
NEDD8-203ENST00000524927 SYNDIG1LA6NDD5 238 aa5.9□□□□□ -1.46
NEDD8-203ENST00000524927 SOCS2O14508 198 aa5.9□□□□□ -1.46
NEDD8-203ENST00000524927 HAT1O14929 419 aa5.9□□□□□ -1.46
NEDD8-203ENST00000524927 PLOD3O60568 738 aa5.9□□□□□ -1.46
NEDD8-203ENST00000524927 EPOP01588 193 aa5.9□□□□□ -1.46
NEDD8-203ENST00000524927 G6PDP11413 515 aa5.9□□□□□ -1.46
NEDD8-203ENST00000524927 CLDN18P56856 261 aa5.9□□□□□ -1.46
NEDD8-203ENST00000524927 OGDHQ02218 1023 aa5.9□□□□□ -1.46
NEDD8-203ENST00000524927 PRDX1Q06830 199 aaKnown RBP5.9□□□□□ -1.46
NEDD8-203ENST00000524927 TSC22D1Q15714 1073 aa5.9□□□□□ -1.46
NEDD8-203ENST00000524927 ODF3L2Q3SX64 289 aa5.9□□□□□ -1.46
NEDD8-203ENST00000524927 TCHHL1Q5QJ38 904 aaPredicted RBP5.9□□□□□ -1.46
NEDD8-203ENST00000524927 LRIF1Q5T3J3 769 aa5.9□□□□□ -1.46
NEDD8-203ENST00000524927 GGNBP1Q5YKI7 109 aa5.9□□□□□ -1.46
NEDD8-203ENST00000524927 METTL2BQ6P1Q9 378 aaKnown RBP5.9□□□□□ -1.46
NEDD8-203ENST00000524927 DNAJC24Q6P3W2 148 aa5.9□□□□□ -1.46
NEDD8-203ENST00000524927 GBP6Q6ZN66 633 aa5.9□□□□□ -1.46
NEDD8-203ENST00000524927 Q6ZSR9 355 aa5.9□□□□□ -1.46
NEDD8-203ENST00000524927 ZNF677Q86XU0 584 aa5.9□□□□□ -1.46
NEDD8-203ENST00000524927 SPATA6LQ8N4H0 392 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms