RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	IFNGR2	P38484	337 aa		7.22	□□□□□ -1.25
SPIDR-223	ENST00000524033	ANXA11	P50995	505 aa	Known RBP	7.22	□□□□□ -1.25
SPIDR-223	ENST00000524033	CCR8	P51685	355 aa		7.22	□□□□□ -1.25
SPIDR-223	ENST00000524033	ATP12A	P54707	1039 aa		7.22	□□□□□ -1.25
SPIDR-223	ENST00000524033	CTBP2	P56545	445 aa		7.22	□□□□□ -1.25
SPIDR-223	ENST00000524033	CSNK1G2	P78368	415 aa		7.22	□□□□□ -1.25
SPIDR-223	ENST00000524033	EIF2B5	Q13144	721 aa	Known RBP	7.22	□□□□□ -1.25
SPIDR-223	ENST00000524033	IL18	Q14116	193 aa		7.22	□□□□□ -1.25
SPIDR-223	ENST00000524033	GNA13	Q14344	377 aa		7.22	□□□□□ -1.25
SPIDR-223	ENST00000524033	FCN2	Q15485	313 aa		7.22	□□□□□ -1.25
SPIDR-223	ENST00000524033	DEFB133	Q30KQ1	61 aa		7.22	□□□□□ -1.25
SPIDR-223	ENST00000524033	TMEM52B	Q4KMG9	183 aa		7.22	□□□□□ -1.25
SPIDR-223	ENST00000524033	CDCP2	Q5VXM1	449 aa		7.22	□□□□□ -1.25
SPIDR-223	ENST00000524033	SEZ6L2	Q6UXD5	910 aa		7.22	□□□□□ -1.25
SPIDR-223	ENST00000524033	WASH2P	Q6VEQ5	465 aa		7.22	□□□□□ -1.25
SPIDR-223	ENST00000524033	RFPL4B	Q6ZWI9	263 aa		7.22	□□□□□ -1.25
SPIDR-223	ENST00000524033	LRRC28	Q86X40	367 aa	Predicted RBP	7.22	□□□□□ -1.25
SPIDR-223	ENST00000524033	TRAPPC5	Q8IUR0	188 aa		7.22	□□□□□ -1.25
SPIDR-223	ENST00000524033	CCDC28A	Q8IWP9	274 aa		7.22	□□□□□ -1.25
SPIDR-223	ENST00000524033	SLC37A3	Q8NCC5	494 aa		7.22	□□□□□ -1.25
SPIDR-223	ENST00000524033	OR4F15	Q8NGB8	312 aa		7.22	□□□□□ -1.25
SPIDR-223	ENST00000524033	OR5AR1	Q8NGP9	310 aa		7.22	□□□□□ -1.25
SPIDR-223	ENST00000524033	NEIL3	Q8TAT5	605 aa		7.22	□□□□□ -1.25
SPIDR-223	ENST00000524033	PIGX	Q8TBF5	258 aa		7.22	□□□□□ -1.25
SPIDR-223	ENST00000524033	SUN5	Q8TC36	379 aa		7.22	□□□□□ -1.25
SPIDR-223	ENST00000524033	ACOT11	Q8WXI4	607 aa	Predicted RBP	7.22	□□□□□ -1.25
SPIDR-223	ENST00000524033	SLC9A6	Q92581	669 aa		7.22	□□□□□ -1.25
SPIDR-223	ENST00000524033	KISS1R	Q969F8	398 aa	Predicted RBP	7.22	□□□□□ -1.25
SPIDR-223	ENST00000524033	RGMA	Q96B86	450 aa		7.22	□□□□□ -1.25
SPIDR-223	ENST00000524033	MOAP1	Q96BY2	351 aa		7.22	□□□□□ -1.25
SPIDR-223	ENST00000524033	SCARF2	Q96GP6	870 aa	Predicted RBP	7.22	□□□□□ -1.25
SPIDR-223	ENST00000524033	SECISBP2	Q96T21	854 aa	Known RBP	7.22	□□□□□ -1.25
SPIDR-223	ENST00000524033	HDHD5	Q9BXW7	423 aa		7.22	□□□□□ -1.25
SPIDR-223	ENST00000524033	PCBD2	Q9H0N5	130 aa		7.22	□□□□□ -1.25
SPIDR-223	ENST00000524033	FN3K	Q9H479	309 aa		7.22	□□□□□ -1.25
SPIDR-223	ENST00000524033	HINT3	Q9NQE9	182 aa	Known RBP	7.22	□□□□□ -1.25
SPIDR-223	ENST00000524033	SLC35C2	Q9NQQ7	365 aa		7.22	□□□□□ -1.25
SPIDR-223	ENST00000524033	MBNL1	Q9NR56	388 aa	Known RBP	7.22	□□□□□ -1.25
SPIDR-223	ENST00000524033	ZCCHC3	Q9NUD5	404 aa	Known RBP	7.22	□□□□□ -1.25
SPIDR-223	ENST00000524033	IL20	Q9NYY1	176 aa		7.22	□□□□□ -1.25
SPIDR-223	ENST00000524033	STMN3	Q9NZ72	180 aa		7.22	□□□□□ -1.25
SPIDR-223	ENST00000524033	MALT1	Q9UDY8	824 aa		7.22	□□□□□ -1.25
SPIDR-223	ENST00000524033	TAC3	Q9UHF0	121 aa		7.22	□□□□□ -1.25
SPIDR-223	ENST00000524033	SLC23A1	Q9UHI7	598 aa		7.22	□□□□□ -1.25
SPIDR-223	ENST00000524033	PLAGL1	Q9UM63	463 aa		7.22	□□□□□ -1.25
SPIDR-223	ENST00000524033	GPR52	Q9Y2T5	361 aa		7.22	□□□□□ -1.25
SPIDR-223	ENST00000524033	GPR55	Q9Y2T6	319 aa	Predicted RBP	7.22	□□□□□ -1.25
SPIDR-223	ENST00000524033	SIRT4	Q9Y6E7	314 aa	Predicted RBP	7.22	□□□□□ -1.25
SPIDR-223	ENST00000524033		U3KQA8	63 aa		7.22	□□□□□ -1.25
SPIDR-223	ENST00000524033	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		7.21	□□□□□ -1.26
SPIDR-223	ENST00000524033	CD8B2	A6NJW9	211 aa		7.21	□□□□□ -1.26
SPIDR-223	ENST00000524033	LMO7DN	F2Z398	122 aa		7.21	□□□□□ -1.26
SPIDR-223	ENST00000524033	SOCS6	O14544	535 aa		7.21	□□□□□ -1.26
SPIDR-223	ENST00000524033	DVL2	O14641	736 aa		7.21	□□□□□ -1.26
SPIDR-223	ENST00000524033	OR5F1	O95221	314 aa		7.21	□□□□□ -1.26
SPIDR-223	ENST00000524033	NTN1	O95631	604 aa		7.21	□□□□□ -1.26
SPIDR-223	ENST00000524033	PAH	P00439	452 aa		7.21	□□□□□ -1.26
SPIDR-223	ENST00000524033	EIF4E	P06730	217 aa	Known RBP	7.21	□□□□□ -1.26
SPIDR-223	ENST00000524033	CD8B	P10966	210 aa		7.21	□□□□□ -1.26
SPIDR-223	ENST00000524033	C6	P13671	934 aa		7.21	□□□□□ -1.26
SPIDR-223	ENST00000524033	NTS	P30990	170 aa		7.21	□□□□□ -1.26
SPIDR-223	ENST00000524033	PRKAR1B	P31321	381 aa		7.21	□□□□□ -1.26
SPIDR-223	ENST00000524033	LSS	P48449	732 aa		7.21	□□□□□ -1.26
SPIDR-223	ENST00000524033	RAG2	P55895	527 aa		7.21	□□□□□ -1.26
SPIDR-223	ENST00000524033	PER3	P56645	1201 aa		7.21	□□□□□ -1.26
SPIDR-223	ENST00000524033	RIPPLY1	Q0D2K3	151 aa		7.21	□□□□□ -1.26
SPIDR-223	ENST00000524033	MAP4K2	Q12851	820 aa		7.21	□□□□□ -1.26
SPIDR-223	ENST00000524033	FOXD4	Q12950	439 aa	Predicted RBP	7.21	□□□□□ -1.26
SPIDR-223	ENST00000524033	MADCAM1	Q13477	382 aa		7.21	□□□□□ -1.26
SPIDR-223	ENST00000524033	C1orf61	Q13536	156 aa		7.21	□□□□□ -1.26
SPIDR-223	ENST00000524033	TSTA3	Q13630	321 aa	Predicted RBP	7.21	□□□□□ -1.26
SPIDR-223	ENST00000524033	INSL4	Q14641	139 aa		7.21	□□□□□ -1.26
SPIDR-223	ENST00000524033	NR0B2	Q15466	257 aa		7.21	□□□□□ -1.26
SPIDR-223	ENST00000524033	ZNF791	Q3KP31	576 aa	Predicted RBP	7.21	□□□□□ -1.26
SPIDR-223	ENST00000524033	SMUG1	Q53HV7	270 aa		7.21	□□□□□ -1.26
SPIDR-223	ENST00000524033	TOR2A	Q5JU69	321 aa		7.21	□□□□□ -1.26
SPIDR-223	ENST00000524033	EXOSC6	Q5RKV6	272 aa	Known RBP	7.21	□□□□□ -1.26
SPIDR-223	ENST00000524033	LCE2A	Q5TA79	106 aa	Predicted RBP	7.21	□□□□□ -1.26
SPIDR-223	ENST00000524033	ZBTB37	Q5TC79	503 aa		7.21	□□□□□ -1.26
SPIDR-223	ENST00000524033	CD276	Q5ZPR3	534 aa		7.21	□□□□□ -1.26
SPIDR-223	ENST00000524033	OR4C11	Q6IEV9	310 aa		7.21	□□□□□ -1.26
SPIDR-223	ENST00000524033	TYW3	Q6IPR3	259 aa	Known RBP	7.21	□□□□□ -1.26
SPIDR-223	ENST00000524033	HEPHL1	Q6MZM0	1159 aa		7.21	□□□□□ -1.26
SPIDR-223	ENST00000524033	NIPAL3	Q6P499	406 aa		7.21	□□□□□ -1.26
SPIDR-223	ENST00000524033	GUSBP11	Q6P575	273 aa		7.21	□□□□□ -1.26
SPIDR-223	ENST00000524033	PXK	Q7Z7A4	578 aa		7.21	□□□□□ -1.26
SPIDR-223	ENST00000524033	OAF	Q86UD1	273 aa		7.21	□□□□□ -1.26
SPIDR-223	ENST00000524033	LHFPL3	Q86UP9	236 aa		7.21	□□□□□ -1.26
SPIDR-223	ENST00000524033	CMIP	Q8IY22	773 aa		7.21	□□□□□ -1.26
SPIDR-223	ENST00000524033	UBE2J2	Q8N2K1	259 aa		7.21	□□□□□ -1.26
SPIDR-223	ENST00000524033	SIRT6	Q8N6T7	355 aa		7.21	□□□□□ -1.26
SPIDR-223	ENST00000524033	TMEM99	Q8N816	258 aa		7.21	□□□□□ -1.26
SPIDR-223	ENST00000524033	TEX19	Q8NA77	164 aa		7.21	□□□□□ -1.26
SPIDR-223	ENST00000524033	GALNT11	Q8NCW6	608 aa		7.21	□□□□□ -1.26
SPIDR-223	ENST00000524033	BBS1	Q8NFJ9	593 aa		7.21	□□□□□ -1.26
SPIDR-223	ENST00000524033	TOR1AIP2	Q8NFQ8	470 aa		7.21	□□□□□ -1.26
SPIDR-223	ENST00000524033	OR11H7	Q8NGC8	314 aa		7.21	□□□□□ -1.26
SPIDR-223	ENST00000524033	OR56A1	Q8NGH5	318 aa		7.21	□□□□□ -1.26
SPIDR-223	ENST00000524033	OR5K2	Q8NHB8	316 aa		7.21	□□□□□ -1.26
SPIDR-223	ENST00000524033	BRIX1	Q8TDN6	353 aa	Known RBP	7.21	□□□□□ -1.26

Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms