RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 BCL2L15Q5TBC7 163 aa10.2□□□□□ -0.78
HDAC9-228ENST00000524023 NANOGNBQ7Z5D8 188 aa10.2□□□□□ -0.78
HDAC9-228ENST00000524023 SLC43A2Q8N370 569 aa10.2□□□□□ -0.78
HDAC9-228ENST00000524023 CADM2Q8N3J6 435 aa10.2□□□□□ -0.78
HDAC9-228ENST00000524023 CSNK1A1LQ8N752 337 aa10.2□□□□□ -0.78
HDAC9-228ENST00000524023 LSMEM1Q8N8F7 131 aa10.2□□□□□ -0.78
HDAC9-228ENST00000524023 SDR9C7Q8NEX9 313 aa10.2□□□□□ -0.78
HDAC9-228ENST00000524023 OR52E2Q8NGJ4 325 aa10.2□□□□□ -0.78
HDAC9-228ENST00000524023 ZMYND19Q96E35 227 aaPredicted RBP10.2□□□□□ -0.78
HDAC9-228ENST00000524023 ERMAPQ96PL5 475 aaPredicted RBP10.2□□□□□ -0.78
HDAC9-228ENST00000524023 TTTY10Q9BZA0 68 aa10.2□□□□□ -0.78
HDAC9-228ENST00000524023 STARD5Q9NSY2 213 aa10.2□□□□□ -0.78
HDAC9-228ENST00000524023 CHRNA9Q9UGM1 479 aa10.2□□□□□ -0.78
HDAC9-228ENST00000524023 ENTPD2Q9Y5L3 495 aa10.2□□□□□ -0.78
HDAC9-228ENST00000524023 LRP4O75096 1905 aa10.2□□□□□ -0.78
HDAC9-228ENST00000524023 SZT2Q5T011 3432 aa10.2□□□□□ -0.78
HDAC9-228ENST00000524023 SPTBN5Q9NRC6 3674 aaKnown RBP10.2□□□□□ -0.78
HDAC9-228ENST00000524023 A0A0J9YY10 115 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 ERVH48-1M5A8F1 160 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 MAGEB4O15481 346 aaPredicted RBP10.19□□□□□ -0.78
HDAC9-228ENST00000524023 LINC01565O15544 149 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 HYAL3O43820 417 aaPredicted RBP10.19□□□□□ -0.78
HDAC9-228ENST00000524023 DHFRP00374 187 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 SERPINA3P01011 423 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 EGFP01133 1207 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 IGKV1D-16P01601 117 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 SLC35E2P0CK97 266 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 HIST1H1CP16403 213 aaKnown RBP10.19□□□□□ -0.78
HDAC9-228ENST00000524023 ATF1P18846 271 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 S1PR1P21453 382 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 HTR2BP41595 481 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 RAB38P57729 211 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 VSX2P58304 361 aaPredicted RBP10.19□□□□□ -0.78
HDAC9-228ENST00000524023 SNRPD2P62316 118 aaKnown RBP10.19□□□□□ -0.78
HDAC9-228ENST00000524023 GPLD1P80108 840 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 GAS6Q14393 721 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 FAM205BPQ63HN1 556 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 LINC00114Q6XXX2 140 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 C7orf61Q8IZ16 206 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 OR4N2Q8NGD1 307 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 OR4K13Q8NH42 304 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 THAP4Q8WY91 577 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 HSD17B8Q92506 261 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 YIPF5Q969M3 257 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 SMIM19Q96E16 107 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 PELI1Q96FA3 418 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 ZCCHC4Q9H5U6 513 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 HRASLS2Q9NWW9 162 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 CPNE7Q9UBL6 633 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 ICAM5Q9UMF0 924 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 CLEC4AQ9UMR7 237 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 HSPB11Q9Y547 144 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 COL4A2P08572 1712 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 TRAV6A0A075B6T7 132 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 A0A1W2PPK0 400 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 C7orf66A4D0T2 115 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 NOTOA8MTQ0 251 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 OR10H2O60403 315 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 RDH16O75452 317 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 OR2T7P0C7T2 308 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 EPXP11678 715 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 GDI2P50395 445 aaKnown RBP10.19□□□□□ -0.78
HDAC9-228ENST00000524023 CDK5R1Q15078 307 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 FCN2Q15485 313 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 CEP78Q5JTW2 689 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 LYPD4Q6UWN0 246 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 CREB3L2Q70SY1 520 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 SYT9Q86SS6 491 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 GHDCQ8N2G8 530 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 SYS1Q8N2H4 156 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 FAM98AQ8NCA5 519 aaKnown RBP10.19□□□□□ -0.78
HDAC9-228ENST00000524023 OR4D9Q8NGE8 314 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 OR51L1Q8NGJ5 315 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 OR2T27Q8NH04 317 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 HAVCR2Q8TDQ0 301 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 SNAPC3Q92966 411 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 SCMH1Q96GD3 660 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 HYLS1Q96M11 299 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 LRFN5Q96NI6 719 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 CNN2Q99439 309 aaKnown RBP10.19□□□□□ -0.78
HDAC9-228ENST00000524023 LMF2Q9BU23 707 aaKnown RBP10.19□□□□□ -0.78
HDAC9-228ENST00000524023 TMEM106CQ9BVX2 250 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 MED28Q9H204 178 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 DPAGT1Q9H3H5 408 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 GHITMQ9H3K2 345 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 NUDT15Q9NV35 164 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 ABRACLQ9P1F3 81 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 MYO9BQ13459 2157 aa10.19□□□□□ -0.78
HDAC9-228ENST00000524023 A0A0C4DFX4 3053 aa10.18□□□□□ -0.78
HDAC9-228ENST00000524023 A0A0B4J203 849 aa10.18□□□□□ -0.78
HDAC9-228ENST00000524023 FLRT2O43155 660 aa10.18□□□□□ -0.78
HDAC9-228ENST00000524023 HCRTR1O43613 425 aa10.18□□□□□ -0.78
HDAC9-228ENST00000524023 UBL3O95164 117 aa10.18□□□□□ -0.78
HDAC9-228ENST00000524023 NDUFB2O95178 105 aa10.18□□□□□ -0.78
HDAC9-228ENST00000524023 GUSBP08236 651 aa10.18□□□□□ -0.78
HDAC9-228ENST00000524023 CD3GP09693 182 aa10.18□□□□□ -0.78
HDAC9-228ENST00000524023 SNRPBP14678 240 aaKnown RBP10.18□□□□□ -0.78
HDAC9-228ENST00000524023 MMP15P51511 669 aa10.18□□□□□ -0.78
HDAC9-228ENST00000524023 GBX2P52951 348 aaPredicted RBP10.18□□□□□ -0.78
HDAC9-228ENST00000524023 RPS11P62280 158 aaKnown RBP eCLIP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms