RNA–Protein interactions for RNA: ENST00000523517.5

IKBKB-228, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 1 (best)

Gene IKBKB, Length 2,378 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-228ENST00000523517 UBL3O95164 117 aa16.46■□□□□ 0.23
IKBKB-228ENST00000523517 TFP02787 698 aa16.46■□□□□ 0.23
IKBKB-228ENST00000523517 CD3GP09693 182 aa16.46■□□□□ 0.23
IKBKB-228ENST00000523517 SNRPBP14678 240 aaKnown RBP16.46■□□□□ 0.23
IKBKB-228ENST00000523517 ATF1P18846 271 aa16.46■□□□□ 0.23
IKBKB-228ENST00000523517 CRYZQ08257 329 aaKnown RBP16.46■□□□□ 0.23
IKBKB-228ENST00000523517 GAS6Q14393 721 aa16.46■□□□□ 0.23
IKBKB-228ENST00000523517 CCDC58Q4VC31 144 aa16.46■□□□□ 0.23
IKBKB-228ENST00000523517 LYPD4Q6UWN0 246 aa16.46■□□□□ 0.23
IKBKB-228ENST00000523517 LYPD8Q6UX82 237 aa16.46■□□□□ 0.23
IKBKB-228ENST00000523517 ZNF767PQ75MW2 155 aa16.46■□□□□ 0.23
IKBKB-228ENST00000523517 C9orf62Q8N4C0 152 aa16.46■□□□□ 0.23
IKBKB-228ENST00000523517 LRRC17Q8N6Y2 441 aa16.46■□□□□ 0.23
IKBKB-228ENST00000523517 ZNF655Q8N720 491 aaPredicted RBP16.46■□□□□ 0.23
IKBKB-228ENST00000523517 CSNK1A1LQ8N752 337 aa16.46■□□□□ 0.23
IKBKB-228ENST00000523517 FAM98AQ8NCA5 519 aaKnown RBP16.46■□□□□ 0.23
IKBKB-228ENST00000523517 OR4K13Q8NH42 304 aa16.46■□□□□ 0.23
IKBKB-228ENST00000523517 YIPF5Q969M3 257 aa16.46■□□□□ 0.23
IKBKB-228ENST00000523517 PHF21AQ96BD5 680 aa16.46■□□□□ 0.23
IKBKB-228ENST00000523517 PELI1Q96FA3 418 aa16.46■□□□□ 0.23
IKBKB-228ENST00000523517 FBRSQ9HAH7 460 aa16.46■□□□□ 0.23
IKBKB-228ENST00000523517 ABRACLQ9P1F3 81 aa16.46■□□□□ 0.23
IKBKB-228ENST00000523517 CHRNA9Q9UGM1 479 aa16.46■□□□□ 0.23
IKBKB-228ENST00000523517 NUBP2Q9Y5Y2 271 aa16.46■□□□□ 0.23
IKBKB-228ENST00000523517 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.46■□□□□ 0.23
IKBKB-228ENST00000523517 EPXP11678 715 aa16.46■□□□□ 0.23
IKBKB-228ENST00000523517 GDI2P50395 445 aaKnown RBP16.46■□□□□ 0.23
IKBKB-228ENST00000523517 MMP15P51511 669 aa16.46■□□□□ 0.23
IKBKB-228ENST00000523517 GBX2P52951 348 aaPredicted RBP16.46■□□□□ 0.23
IKBKB-228ENST00000523517 SRP54P61011 504 aaKnown RBP16.46■□□□□ 0.23
IKBKB-228ENST00000523517 CEP78Q5JTW2 689 aa16.46■□□□□ 0.23
IKBKB-228ENST00000523517 MANEAQ5SRI9 462 aa16.46■□□□□ 0.23
IKBKB-228ENST00000523517 RNF44Q7L0R7 432 aa16.46■□□□□ 0.23
IKBKB-228ENST00000523517 SYT9Q86SS6 491 aa16.46■□□□□ 0.23
IKBKB-228ENST00000523517 SIAH3Q8IW03 269 aa16.46■□□□□ 0.23
IKBKB-228ENST00000523517 TOMM5Q8N4H5 51 aa16.46■□□□□ 0.23
IKBKB-228ENST00000523517 OR4D9Q8NGE8 314 aa16.46■□□□□ 0.23
IKBKB-228ENST00000523517 SMIM19Q96E16 107 aa16.46■□□□□ 0.23
IKBKB-228ENST00000523517 SIPA1Q96FS4 1042 aa16.46■□□□□ 0.23
IKBKB-228ENST00000523517 IRF2BPLQ9H1B7 796 aa16.46■□□□□ 0.23
IKBKB-228ENST00000523517 ZCCHC4Q9H5U6 513 aa16.46■□□□□ 0.23
IKBKB-228ENST00000523517 A0A0B4J203 849 aa16.45■□□□□ 0.22
IKBKB-228ENST00000523517 C2orf74A8MZ97 194 aa16.45■□□□□ 0.22
IKBKB-228ENST00000523517 FLRT2O43155 660 aa16.45■□□□□ 0.22
IKBKB-228ENST00000523517 HYAL3O43820 417 aaPredicted RBP16.45■□□□□ 0.22
IKBKB-228ENST00000523517 TCRBP04435 133 aa16.45■□□□□ 0.22
IKBKB-228ENST00000523517 OR2T7P0C7T2 308 aa16.45■□□□□ 0.22
IKBKB-228ENST00000523517 HIST1H1CP16403 213 aaKnown RBP16.45■□□□□ 0.22
IKBKB-228ENST00000523517 STOMP27105 288 aa16.45■□□□□ 0.22
IKBKB-228ENST00000523517 PITPNAQ00169 270 aa16.45■□□□□ 0.22
IKBKB-228ENST00000523517 PSG6Q00889 435 aa16.45■□□□□ 0.22
IKBKB-228ENST00000523517 CDK5R1Q15078 307 aa16.45■□□□□ 0.22
IKBKB-228ENST00000523517 ALG11Q2TAA5 492 aa16.45■□□□□ 0.22
IKBKB-228ENST00000523517 ANKRD54Q6NXT1 300 aa16.45■□□□□ 0.22
IKBKB-228ENST00000523517 SYS1Q8N2H4 156 aa16.45■□□□□ 0.22
IKBKB-228ENST00000523517 LSMEM1Q8N8F7 131 aa16.45■□□□□ 0.22
IKBKB-228ENST00000523517 SDR9C7Q8NEX9 313 aa16.45■□□□□ 0.22
IKBKB-228ENST00000523517 OR2T27Q8NH04 317 aa16.45■□□□□ 0.22
IKBKB-228ENST00000523517 HAVCR2Q8TDQ0 301 aa16.45■□□□□ 0.22
IKBKB-228ENST00000523517 ZFP3Q96NJ6 502 aa16.45■□□□□ 0.22
IKBKB-228ENST00000523517 MTIF3Q9H2K0 278 aaKnown RBP16.45■□□□□ 0.22
IKBKB-228ENST00000523517 CD93Q9NPY3 652 aa16.45■□□□□ 0.22
IKBKB-228ENST00000523517 STARD5Q9NSY2 213 aa16.45■□□□□ 0.22
IKBKB-228ENST00000523517 ICAM5Q9UMF0 924 aa16.45■□□□□ 0.22
IKBKB-228ENST00000523517 MRPS7Q9Y2R9 242 aaKnown RBP16.45■□□□□ 0.22
IKBKB-228ENST00000523517 TNFRSF10CO14798 259 aa16.45■□□□□ 0.22
IKBKB-228ENST00000523517 ARL6IP5O75915 188 aa16.45■□□□□ 0.22
IKBKB-228ENST00000523517 KLF8O95600 359 aaPredicted RBP16.45■□□□□ 0.22
IKBKB-228ENST00000523517 IGKV1D-16P01601 117 aa16.45■□□□□ 0.22
IKBKB-228ENST00000523517 SLC35E2P0CK97 266 aa16.45■□□□□ 0.22
IKBKB-228ENST00000523517 ACTA2P62736 377 aa16.45■□□□□ 0.22
IKBKB-228ENST00000523517 ACTG2P63267 376 aa16.45■□□□□ 0.22
IKBKB-228ENST00000523517 DGCR2P98153 550 aa16.45■□□□□ 0.22
IKBKB-228ENST00000523517 RNASE12Q5GAN4 147 aaKnown RBP16.45■□□□□ 0.22
IKBKB-228ENST00000523517 FBXO46Q6PJ61 603 aaPredicted RBP16.45■□□□□ 0.22
IKBKB-228ENST00000523517 LINC00114Q6XXX2 140 aa16.45■□□□□ 0.22
IKBKB-228ENST00000523517 OR11H7Q8NGC8 314 aa16.45■□□□□ 0.22
IKBKB-228ENST00000523517 PATE1Q8WXA2 126 aa16.45■□□□□ 0.22
IKBKB-228ENST00000523517 CNN2Q99439 309 aaKnown RBP16.45■□□□□ 0.22
IKBKB-228ENST00000523517 SMAD5Q99717 465 aaKnown RBP16.45■□□□□ 0.22
IKBKB-228ENST00000523517 BRD7Q9NPI1 651 aa16.45■□□□□ 0.22
IKBKB-228ENST00000523517 STMN3Q9NZ72 180 aa16.45■□□□□ 0.22
IKBKB-228ENST00000523517 SCML1Q9UN30 329 aa16.45■□□□□ 0.22
IKBKB-228ENST00000523517 ING4Q9UNL4 249 aa16.45■□□□□ 0.22
IKBKB-228ENST00000523517 ENTPD2Q9Y5L3 495 aa16.45■□□□□ 0.22
IKBKB-228ENST00000523517 OR10H2O60403 315 aa16.44■□□□□ 0.22
IKBKB-228ENST00000523517 NDUFB2O95178 105 aa16.44■□□□□ 0.22
IKBKB-228ENST00000523517 SIRPAP78324 504 aa16.44■□□□□ 0.22
IKBKB-228ENST00000523517 BMPERQ8N8U9 685 aa16.44■□□□□ 0.22
IKBKB-228ENST00000523517 POMGNT2Q8NAT1 580 aa16.44■□□□□ 0.22
IKBKB-228ENST00000523517 OR4N2Q8NGD1 307 aa16.44■□□□□ 0.22
IKBKB-228ENST00000523517 OR51L1Q8NGJ5 315 aa16.44■□□□□ 0.22
IKBKB-228ENST00000523517 LRFN5Q96NI6 719 aa16.44■□□□□ 0.22
IKBKB-228ENST00000523517 EMC7Q9NPA0 242 aa16.44■□□□□ 0.22
IKBKB-228ENST00000523517 MRPL39Q9NYK5 338 aaKnown RBP16.44■□□□□ 0.22
IKBKB-228ENST00000523517 IER3IP1Q9Y5U9 82 aa16.44■□□□□ 0.22
IKBKB-228ENST00000523517 TEX13CA0A0J9YWL9 993 aa16.44■□□□□ 0.22
IKBKB-228ENST00000523517 UCHL1P09936 223 aa16.44■□□□□ 0.22
IKBKB-228ENST00000523517 GIFP27352 417 aa16.44■□□□□ 0.22
IKBKB-228ENST00000523517 NAA10P41227 235 aaPredicted RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms