RNA–Protein interactions for RNA: ENST00000523514.1

FAM49B-227, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 4

Gene FAM49B, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-227ENST00000523514 ZNF836Q6ZNA1 936 aa6.96□□□□□ -1.3
FAM49B-227ENST00000523514 SEM1Q6ZVN7 128 aa6.96□□□□□ -1.3
FAM49B-227ENST00000523514 ZNF550Q7Z398 422 aa6.96□□□□□ -1.3
FAM49B-227ENST00000523514 GRINAQ7Z429 371 aa6.96□□□□□ -1.3
FAM49B-227ENST00000523514 ARPINQ7Z6K5 226 aa6.96□□□□□ -1.3
FAM49B-227ENST00000523514 SERPINA11Q86U17 422 aa6.96□□□□□ -1.3
FAM49B-227ENST00000523514 GGNQ86UU5 652 aa6.96□□□□□ -1.3
FAM49B-227ENST00000523514 SNX32Q86XE0 403 aa6.96□□□□□ -1.3
FAM49B-227ENST00000523514 CCDC71Q8IV32 467 aaPredicted RBP6.96□□□□□ -1.3
FAM49B-227ENST00000523514 LILRA2Q8N149 483 aa6.96□□□□□ -1.3
FAM49B-227ENST00000523514 C11orf65Q8NCR3 313 aa6.96□□□□□ -1.3
FAM49B-227ENST00000523514 HIPK4Q8NE63 616 aa6.96□□□□□ -1.3
FAM49B-227ENST00000523514 TNIP2Q8NFZ5 429 aa6.96□□□□□ -1.3
FAM49B-227ENST00000523514 OR8J3Q8NGG0 315 aa6.96□□□□□ -1.3
FAM49B-227ENST00000523514 OR2V1Q8NHB1 315 aa6.96□□□□□ -1.3
FAM49B-227ENST00000523514 RP9Q8TA86 221 aaKnown RBP6.96□□□□□ -1.3
FAM49B-227ENST00000523514 POC1BQ8TC44 478 aa6.96□□□□□ -1.3
FAM49B-227ENST00000523514 ZG16BQ96DA0 208 aa6.96□□□□□ -1.3
FAM49B-227ENST00000523514 KLHL15Q96M94 604 aa6.96□□□□□ -1.3
FAM49B-227ENST00000523514 ELAC2Q9BQ52 826 aaKnown RBP6.96□□□□□ -1.3
FAM49B-227ENST00000523514 PINK1Q9BXM7 581 aa6.96□□□□□ -1.3
FAM49B-227ENST00000523514 QRSL1Q9H0R6 528 aaKnown RBP6.96□□□□□ -1.3
FAM49B-227ENST00000523514 EVA1AQ9H8M9 152 aa6.96□□□□□ -1.3
FAM49B-227ENST00000523514 ACER3Q9NUN7 267 aa6.96□□□□□ -1.3
FAM49B-227ENST00000523514 PFDN2Q9UHV9 154 aa6.96□□□□□ -1.3
FAM49B-227ENST00000523514 MCTS1Q9ULC4 181 aaKnown RBP6.96□□□□□ -1.3
FAM49B-227ENST00000523514 ZNF443Q9Y2A4 671 aaPredicted RBP6.96□□□□□ -1.3
FAM49B-227ENST00000523514 AP3M1Q9Y2T2 418 aa6.96□□□□□ -1.3
FAM49B-227ENST00000523514 INTS1Q8N201 2190 aaKnown RBP6.96□□□□□ -1.3
FAM49B-227ENST00000523514 NBPF19A0A087WUL8 3843 aa6.96□□□□□ -1.3
FAM49B-227ENST00000523514 MED12LQ86YW9 2145 aa6.95□□□□□ -1.3
FAM49B-227ENST00000523514 ADGRG4Q8IZF6 3080 aa6.95□□□□□ -1.3
FAM49B-227ENST00000523514 ANKHD1Q8IWZ3 2542 aaKnown RBP6.95□□□□□ -1.3
FAM49B-227ENST00000523514 CFAP73A6NFT4 308 aa6.95□□□□□ -1.3
FAM49B-227ENST00000523514 FBP2O00757 339 aa6.95□□□□□ -1.3
FAM49B-227ENST00000523514 SNX3O60493 162 aa6.95□□□□□ -1.3
FAM49B-227ENST00000523514 BMP5P22003 454 aa6.95□□□□□ -1.3
FAM49B-227ENST00000523514 PRKAR1BP31321 381 aa6.95□□□□□ -1.3
FAM49B-227ENST00000523514 RYKP34925 604 aa6.95□□□□□ -1.3
FAM49B-227ENST00000523514 SLC1A3P43003 542 aa6.95□□□□□ -1.3
FAM49B-227ENST00000523514 CLK1P49759 484 aaKnown RBP6.95□□□□□ -1.3
FAM49B-227ENST00000523514 ZNF136P52737 540 aa6.95□□□□□ -1.3
FAM49B-227ENST00000523514 SUCLG1P53597 346 aaKnown RBP6.95□□□□□ -1.3
FAM49B-227ENST00000523514 SEC24CP53992 1094 aa6.95□□□□□ -1.3
FAM49B-227ENST00000523514 SESN3P58005 492 aa6.95□□□□□ -1.3
FAM49B-227ENST00000523514 MTPNP58546 118 aa6.95□□□□□ -1.3
FAM49B-227ENST00000523514 MERTKQ12866 999 aa6.95□□□□□ -1.3
FAM49B-227ENST00000523514 EPS8Q12929 822 aa6.95□□□□□ -1.3
FAM49B-227ENST00000523514 PON3Q15166 354 aa6.95□□□□□ -1.3
FAM49B-227ENST00000523514 TOMM34Q15785 309 aaPredicted RBP6.95□□□□□ -1.3
FAM49B-227ENST00000523514 HBMQ6B0K9 141 aa6.95□□□□□ -1.3
FAM49B-227ENST00000523514 GTF2IRD2BQ6EKJ0 949 aa6.95□□□□□ -1.3
FAM49B-227ENST00000523514 PLEKHM3Q6ZWE6 761 aa6.95□□□□□ -1.3
FAM49B-227ENST00000523514 NET1Q7Z628 596 aaPredicted RBP6.95□□□□□ -1.3
FAM49B-227ENST00000523514 HMGN2P46Q86SG4 172 aa6.95□□□□□ -1.3
FAM49B-227ENST00000523514 PATL1Q86TB9 770 aaKnown RBP6.95□□□□□ -1.3
FAM49B-227ENST00000523514 GTF2IRD2Q86UP8 949 aa6.95□□□□□ -1.3
FAM49B-227ENST00000523514 VRK2Q86Y07 508 aa6.95□□□□□ -1.3
FAM49B-227ENST00000523514 C9orf106Q8NAJ2 232 aa6.95□□□□□ -1.3
FAM49B-227ENST00000523514 NAXEQ8NCW5 288 aa6.95□□□□□ -1.3
FAM49B-227ENST00000523514 OR10D3Q8NH80 312 aa6.95□□□□□ -1.3
FAM49B-227ENST00000523514 NFKBIDQ8NI38 313 aa6.95□□□□□ -1.3
FAM49B-227ENST00000523514 CNOT9Q92600 299 aaKnown RBP6.95□□□□□ -1.3
FAM49B-227ENST00000523514 MAL2Q969L2 176 aa6.95□□□□□ -1.3
FAM49B-227ENST00000523514 CPNE4Q96A23 557 aaPredicted RBP6.95□□□□□ -1.3
FAM49B-227ENST00000523514 LRRC58Q96CX6 371 aa6.95□□□□□ -1.3
FAM49B-227ENST00000523514 CMTM5Q96DZ9 223 aa6.95□□□□□ -1.3
FAM49B-227ENST00000523514 REXO5Q96IC2 774 aaKnown RBP6.95□□□□□ -1.3
FAM49B-227ENST00000523514 ADGRG7Q96K78 797 aa6.95□□□□□ -1.3
FAM49B-227ENST00000523514 PRRG4Q9BZD6 226 aa6.95□□□□□ -1.3
FAM49B-227ENST00000523514 FAM107BQ9H098 131 aa6.95□□□□□ -1.3
FAM49B-227ENST00000523514 PIGMQ9H3S5 423 aa6.95□□□□□ -1.3
FAM49B-227ENST00000523514 IKZF5Q9H5V7 419 aa6.95□□□□□ -1.3
FAM49B-227ENST00000523514 TMEM185BQ9H7F4 350 aa6.95□□□□□ -1.3
FAM49B-227ENST00000523514 KAT8Q9H7Z6 458 aaKnown RBP6.95□□□□□ -1.3
FAM49B-227ENST00000523514 RNF122Q9H9V4 155 aa6.95□□□□□ -1.3
FAM49B-227ENST00000523514 GLRX2Q9NS18 164 aa6.95□□□□□ -1.3
FAM49B-227ENST00000523514 KLHL28Q9NXS3 571 aa6.95□□□□□ -1.3
FAM49B-227ENST00000523514 SLC13A4Q9UKG4 626 aa6.95□□□□□ -1.3
FAM49B-227ENST00000523514 CELSR2Q9HCU4 2923 aa6.95□□□□□ -1.3
FAM49B-227ENST00000523514 KIAA1549Q9HCM3 1950 aa6.95□□□□□ -1.3
FAM49B-227ENST00000523514 HCFC1P51610 2035 aa6.94□□□□□ -1.3
FAM49B-227ENST00000523514 LOC100653049A0A140TA62 436 aa6.94□□□□□ -1.3
FAM49B-227ENST00000523514 NKX2-6A6NCS4 301 aa6.94□□□□□ -1.3
FAM49B-227ENST00000523514 CLDN24A6NM45 220 aa6.94□□□□□ -1.3
FAM49B-227ENST00000523514 KDM4EB2RXH2 506 aaPredicted RBP6.94□□□□□ -1.3
FAM49B-227ENST00000523514 FXYD1O00168 92 aa6.94□□□□□ -1.3
FAM49B-227ENST00000523514 NDUFAB1O14561 156 aa6.94□□□□□ -1.3
FAM49B-227ENST00000523514 TNFSF11O14788 317 aa6.94□□□□□ -1.3
FAM49B-227ENST00000523514 ZNF208O43345 1280 aa6.94□□□□□ -1.3
FAM49B-227ENST00000523514 HNRNPRO43390 633 aaKnown RBP6.94□□□□□ -1.3
FAM49B-227ENST00000523514 DNPH1O43598 174 aa6.94□□□□□ -1.3
FAM49B-227ENST00000523514 CXCL13O43927 109 aa6.94□□□□□ -1.3
FAM49B-227ENST00000523514 KRT34O76011 436 aa6.94□□□□□ -1.3
FAM49B-227ENST00000523514 TGM6O95932 706 aa6.94□□□□□ -1.3
FAM49B-227ENST00000523514 COX4I1P13073 169 aa6.94□□□□□ -1.3
FAM49B-227ENST00000523514 COX6B1P14854 86 aa6.94□□□□□ -1.3
FAM49B-227ENST00000523514 CD1EP15812 388 aa6.94□□□□□ -1.3
FAM49B-227ENST00000523514 DRD4P21917 467 aa6.94□□□□□ -1.3
FAM49B-227ENST00000523514 PRDX6P30041 224 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms