RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 PPP3R2Q96LZ3 170 aa22.75■■□□□ 1.23
PVT1-219ENST00000523427 CTPS2Q9NRF8 586 aa22.75■■□□□ 1.23
PVT1-219ENST00000523427 IGKV3D-15A0A087WSY6 115 aa22.74■■□□□ 1.23
PVT1-219ENST00000523427 LOC100289279A0A1B0GTE1 492 aa22.74■■□□□ 1.23
PVT1-219ENST00000523427 TRIM13O60858 407 aa22.74■■□□□ 1.23
PVT1-219ENST00000523427 SLU7O95391 586 aaKnown RBP22.74■■□□□ 1.23
PVT1-219ENST00000523427 OR2B6P58173 313 aa22.74■■□□□ 1.23
PVT1-219ENST00000523427 CASP12Q6UXS9 341 aa22.74■■□□□ 1.23
PVT1-219ENST00000523427 RNF165Q6ZSG1 346 aa22.74■■□□□ 1.23
PVT1-219ENST00000523427 PSMA8Q8TAA3 256 aa22.74■■□□□ 1.23
PVT1-219ENST00000523427 SFXN5Q8TD22 340 aa22.74■■□□□ 1.23
PVT1-219ENST00000523427 MUS81Q96NY9 551 aa22.74■■□□□ 1.23
PVT1-219ENST00000523427 TRMOQ9BU70 441 aa22.74■■□□□ 1.23
PVT1-219ENST00000523427 OR11A1Q9GZK7 315 aa22.74■■□□□ 1.23
PVT1-219ENST00000523427 NMUR2Q9GZQ4 415 aa22.74■■□□□ 1.23
PVT1-219ENST00000523427 SERHL2Q9H4I8 314 aa22.74■■□□□ 1.23
PVT1-219ENST00000523427 FKRPQ9H9S5 495 aa22.74■■□□□ 1.23
PVT1-219ENST00000523427 UPB1Q9UBR1 384 aa22.74■■□□□ 1.23
PVT1-219ENST00000523427 STX11O75558 287 aa22.73■■□□□ 1.23
PVT1-219ENST00000523427 UGT2B17O75795 530 aa22.73■■□□□ 1.23
PVT1-219ENST00000523427 ITGA5P08648 1049 aa22.73■■□□□ 1.23
PVT1-219ENST00000523427 CSF3P09919 207 aa22.73■■□□□ 1.23
PVT1-219ENST00000523427 KRT4P19013 534 aa22.73■■□□□ 1.23
PVT1-219ENST00000523427 GZMKP49863 264 aa22.73■■□□□ 1.23
PVT1-219ENST00000523427 HBA1P69905 142 aa22.73■■□□□ 1.23
PVT1-219ENST00000523427 PGS1Q32NB8 556 aa22.73■■□□□ 1.23
PVT1-219ENST00000523427 UGT3A2Q3SY77 523 aa22.73■■□□□ 1.23
PVT1-219ENST00000523427 FAM120AOSQ5T036 256 aa22.73■■□□□ 1.23
PVT1-219ENST00000523427 IL23RQ5VWK5 629 aa22.73■■□□□ 1.23
PVT1-219ENST00000523427 OR7E24Q6IFN5 339 aa22.73■■□□□ 1.23
PVT1-219ENST00000523427 FAM166AQ6J272 317 aa22.73■■□□□ 1.23
PVT1-219ENST00000523427 EIF3MQ7L2H7 374 aaKnown RBP22.73■■□□□ 1.23
PVT1-219ENST00000523427 C6orf120Q7Z4R8 191 aa22.73■■□□□ 1.23
PVT1-219ENST00000523427 HMGN2P46Q86SG4 172 aa22.73■■□□□ 1.23
PVT1-219ENST00000523427 WDR31Q8NA23 367 aa22.73■■□□□ 1.23
PVT1-219ENST00000523427 PIGXQ8TBF5 258 aa22.73■■□□□ 1.23
PVT1-219ENST00000523427 SLC25A43Q8WUT9 341 aaPredicted RBP22.73■■□□□ 1.23
PVT1-219ENST00000523427 MOAP1Q96BY2 351 aa22.73■■□□□ 1.23
PVT1-219ENST00000523427 PRPF18Q99633 342 aaKnown RBP22.73■■□□□ 1.23
PVT1-219ENST00000523427 TXLNGYQ9BZA5 131 aa22.73■■□□□ 1.23
PVT1-219ENST00000523427 SPIN1Q9Y657 262 aaPredicted RBP22.73■■□□□ 1.23
PVT1-219ENST00000523427 GPR171O14626 319 aa22.72■■□□□ 1.23
PVT1-219ENST00000523427 APOBEC3AP31941 199 aaPredicted RBP22.72■■□□□ 1.23
PVT1-219ENST00000523427 PDK3Q15120 406 aa22.72■■□□□ 1.23
PVT1-219ENST00000523427 ZNF141Q15928 474 aa22.72■■□□□ 1.23
PVT1-219ENST00000523427 ATP6AP1LQ52LC2 224 aa22.72■■□□□ 1.23
PVT1-219ENST00000523427 BHLHB9Q6PI77 547 aa22.72■■□□□ 1.23
PVT1-219ENST00000523427 C16orf62Q7Z3J2 963 aa22.72■■□□□ 1.23
PVT1-219ENST00000523427 FNDC5Q8NAU1 212 aa22.72■■□□□ 1.23
PVT1-219ENST00000523427 COQ8BQ96D53 544 aa22.72■■□□□ 1.23
PVT1-219ENST00000523427 RHOXF2Q9BQY4 288 aa22.72■■□□□ 1.23
PVT1-219ENST00000523427 DUSP26Q9BV47 211 aa22.72■■□□□ 1.23
PVT1-219ENST00000523427 CHRNA9Q9UGM1 479 aa22.72■■□□□ 1.23
PVT1-219ENST00000523427 MID2Q9UJV3 735 aa22.72■■□□□ 1.23
PVT1-219ENST00000523427 ATP6V1G2-DDX39BF2Z307 99 aa22.71■■□□□ 1.23
PVT1-219ENST00000523427 BCAS1O75363 584 aaPredicted RBP22.71■■□□□ 1.23
PVT1-219ENST00000523427 CDH2P19022 906 aaPredicted RBP22.71■■□□□ 1.23
PVT1-219ENST00000523427 PDLIM4P50479 330 aa22.71■■□□□ 1.23
PVT1-219ENST00000523427 SLC25A3Q00325 362 aa22.71■■□□□ 1.23
PVT1-219ENST00000523427 MAPK14Q16539 360 aa22.71■■□□□ 1.23
PVT1-219ENST00000523427 CLECL1Q8IZS7 167 aa22.71■■□□□ 1.23
PVT1-219ENST00000523427 SLC35G5Q96KT7 338 aa22.71■■□□□ 1.23
PVT1-219ENST00000523427 C3orf30Q96M34 536 aa22.71■■□□□ 1.23
PVT1-219ENST00000523427 CCDC106Q9BWC9 280 aa22.71■■□□□ 1.23
PVT1-219ENST00000523427 EML4Q9HC35 981 aaKnown RBP22.71■■□□□ 1.23
PVT1-219ENST00000523427 MALT1Q9UDY8 824 aa22.71■■□□□ 1.23
PVT1-219ENST00000523427 DUXAA6NLW8 204 aa22.7■■□□□ 1.22
PVT1-219ENST00000523427 KIAA0513O60268 411 aa22.7■■□□□ 1.22
PVT1-219ENST00000523427 DNAJA2O60884 412 aa22.7■■□□□ 1.22
PVT1-219ENST00000523427 SKAP2O75563 359 aaPredicted RBP22.7■■□□□ 1.22
PVT1-219ENST00000523427 LYPLA1O75608 230 aaPredicted RBP22.7■■□□□ 1.22
PVT1-219ENST00000523427 FGF4P08620 206 aa22.7■■□□□ 1.22
PVT1-219ENST00000523427 APEHP13798 732 aaKnown RBP22.7■■□□□ 1.22
PVT1-219ENST00000523427 APOBEC1P41238 236 aaKnown RBP22.7■■□□□ 1.22
PVT1-219ENST00000523427 MAGEA8P43361 318 aa22.7■■□□□ 1.22
PVT1-219ENST00000523427 PHC1P78364 1004 aa22.7■■□□□ 1.22
PVT1-219ENST00000523427 C6orf136Q5SQH8 315 aa22.7■■□□□ 1.22
PVT1-219ENST00000523427 NATD1Q8N6N6 113 aa22.7■■□□□ 1.22
PVT1-219ENST00000523427 UBLCP1Q8WVY7 318 aaPredicted RBP22.7■■□□□ 1.22
PVT1-219ENST00000523427 MSI2Q96DH6 328 aaKnown RBP22.7■■□□□ 1.22
PVT1-219ENST00000523427 PRR14Q9BWN1 585 aa22.7■■□□□ 1.22
PVT1-219ENST00000523427 MOKQ9UQ07 419 aa22.7■■□□□ 1.22
PVT1-219ENST00000523427 RNF103-CHMP3A0A140T963 221 aa22.69■■□□□ 1.22
PVT1-219ENST00000523427 PMS2P2O95744 297 aa22.69■■□□□ 1.22
PVT1-219ENST00000523427 ALDH3A1P30838 453 aa22.69■■□□□ 1.22
PVT1-219ENST00000523427 ARHGAP11BQ3KRB8 267 aa22.69■■□□□ 1.22
PVT1-219ENST00000523427 IQCCQ4KMZ1 466 aa22.69■■□□□ 1.22
PVT1-219ENST00000523427 ZCCHC23Q6ZST2 131 aa22.69■■□□□ 1.22
PVT1-219ENST00000523427 CNPY4Q8N129 248 aa22.69■■□□□ 1.22
PVT1-219ENST00000523427 EPS8L3Q8TE67 593 aaKnown RBP22.69■■□□□ 1.22
PVT1-219ENST00000523427 XAGE5Q8WWM1 108 aa22.69■■□□□ 1.22
PVT1-219ENST00000523427 FOXN4Q96NZ1 517 aa22.69■■□□□ 1.22
PVT1-219ENST00000523427 VRK1Q99986 396 aaPredicted RBP22.69■■□□□ 1.22
PVT1-219ENST00000523427 PIMREGQ9BSJ6 248 aa22.69■■□□□ 1.22
PVT1-219ENST00000523427 MECRQ9BV79 373 aa22.69■■□□□ 1.22
PVT1-219ENST00000523427 BHLHE41Q9C0J9 482 aaPredicted RBP22.69■■□□□ 1.22
PVT1-219ENST00000523427 OR51I1Q9H343 314 aa22.69■■□□□ 1.22
PVT1-219ENST00000523427 SLC17A5Q9NRA2 495 aa22.69■■□□□ 1.22
PVT1-219ENST00000523427 SLC7A10Q9NS82 523 aa22.69■■□□□ 1.22
PVT1-219ENST00000523427 FKBP7Q9Y680 259 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms