RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 NR4A2P43354 598 aa19.9■□□□□ 0.78
PVT1-218ENST00000523328 PDLIM4P50479 330 aa19.9■□□□□ 0.78
PVT1-218ENST00000523328 RPS26P62854 115 aaKnown RBP19.9■□□□□ 0.78
PVT1-218ENST00000523328 PHC1P78364 1004 aa19.9■□□□□ 0.78
PVT1-218ENST00000523328 SWI5Q1ZZU3 235 aa19.9■□□□□ 0.78
PVT1-218ENST00000523328 MST1LQ2TV78 715 aa19.9■□□□□ 0.78
PVT1-218ENST00000523328 LSM12Q3MHD2 195 aaKnown RBP19.9■□□□□ 0.78
PVT1-218ENST00000523328 OLIG3Q7RTU3 272 aa19.9■□□□□ 0.78
PVT1-218ENST00000523328 C10orf107Q8IVU9 208 aa19.9■□□□□ 0.78
PVT1-218ENST00000523328 CCDC103Q8IW40 242 aa19.9■□□□□ 0.78
PVT1-218ENST00000523328 DDIASQ8IXT1 998 aa19.9■□□□□ 0.78
PVT1-218ENST00000523328 PIGXQ8TBF5 258 aa19.9■□□□□ 0.78
PVT1-218ENST00000523328 TWIST2Q8WVJ9 160 aa19.9■□□□□ 0.78
PVT1-218ENST00000523328 COQ8BQ96D53 544 aa19.9■□□□□ 0.78
PVT1-218ENST00000523328 DNAJA3Q96EY1 480 aa19.9■□□□□ 0.78
PVT1-218ENST00000523328 TRMOQ9BU70 441 aa19.9■□□□□ 0.78
PVT1-218ENST00000523328 CTPS2Q9NRF8 586 aa19.9■□□□□ 0.78
PVT1-218ENST00000523328 NDUFS8O00217 210 aa19.89■□□□□ 0.77
PVT1-218ENST00000523328 PIP5K1BO14986 540 aa19.89■□□□□ 0.77
PVT1-218ENST00000523328 FGF4P08620 206 aa19.89■□□□□ 0.77
PVT1-218ENST00000523328 FAM153BP0C7A2 387 aa19.89■□□□□ 0.77
PVT1-218ENST00000523328 APOBEC1P41238 236 aaKnown RBP19.89■□□□□ 0.77
PVT1-218ENST00000523328 PCLAFQ15004 111 aa19.89■□□□□ 0.77
PVT1-218ENST00000523328 FAM153CQ494X1 144 aa19.89■□□□□ 0.77
PVT1-218ENST00000523328 C17orf78Q8N4C9 275 aa19.89■□□□□ 0.77
PVT1-218ENST00000523328 NATD1Q8N6N6 113 aa19.89■□□□□ 0.77
PVT1-218ENST00000523328 FAM71CQ8NEG0 241 aa19.89■□□□□ 0.77
PVT1-218ENST00000523328 ZHX1-C8orf76Q96EF9 292 aa19.89■□□□□ 0.77
PVT1-218ENST00000523328 SORCS2Q96PQ0 1159 aa19.89■□□□□ 0.77
PVT1-218ENST00000523328 PIMREGQ9BSJ6 248 aa19.89■□□□□ 0.77
PVT1-218ENST00000523328 EML4Q9HC35 981 aaKnown RBP19.89■□□□□ 0.77
PVT1-218ENST00000523328 SLC17A5Q9NRA2 495 aa19.89■□□□□ 0.77
PVT1-218ENST00000523328 ATAD3AQ9NVI7 634 aa19.89■□□□□ 0.77
PVT1-218ENST00000523328 CHRNA9Q9UGM1 479 aa19.89■□□□□ 0.77
PVT1-218ENST00000523328 DCTN4Q9UJW0 460 aa19.89■□□□□ 0.77
PVT1-218ENST00000523328 MKLN1Q9UL63 735 aa19.89■□□□□ 0.77
PVT1-218ENST00000523328 IGHV4-61A0A0C4DH41 118 aa19.88■□□□□ 0.77
PVT1-218ENST00000523328 ATP6V1G2-DDX39BF2Z307 99 aa19.88■□□□□ 0.77
PVT1-218ENST00000523328 DNPH1O43598 174 aa19.88■□□□□ 0.77
PVT1-218ENST00000523328 BCAS1O75363 584 aaPredicted RBP19.88■□□□□ 0.77
PVT1-218ENST00000523328 STX11O75558 287 aa19.88■□□□□ 0.77
PVT1-218ENST00000523328 CHRNGP07510 517 aa19.88■□□□□ 0.77
PVT1-218ENST00000523328 APEHP13798 732 aaKnown RBP19.88■□□□□ 0.77
PVT1-218ENST00000523328 MAPK1P28482 360 aa19.88■□□□□ 0.77
PVT1-218ENST00000523328 HBA1P69905 142 aa19.88■□□□□ 0.77
PVT1-218ENST00000523328 H3F3AP84243 136 aa19.88■□□□□ 0.77
PVT1-218ENST00000523328 C9orf135Q5VTT2 229 aa19.88■□□□□ 0.77
PVT1-218ENST00000523328 KRTCAP2Q8N6L1 136 aa19.88■□□□□ 0.77
PVT1-218ENST00000523328 C1orf162Q8NEQ5 155 aaPredicted RBP19.88■□□□□ 0.77
PVT1-218ENST00000523328 FBXO17Q96EF6 278 aa19.88■□□□□ 0.77
PVT1-218ENST00000523328 PPP3R2Q96LZ3 170 aa19.88■□□□□ 0.77
PVT1-218ENST00000523328 OR11A1Q9GZK7 315 aa19.88■□□□□ 0.77
PVT1-218ENST00000523328 ZNF350Q9GZX5 532 aa19.88■□□□□ 0.77
PVT1-218ENST00000523328 AMDHD2Q9Y303 409 aa19.88■□□□□ 0.77
PVT1-218ENST00000523328 HDGFL3Q9Y3E1 203 aa19.88■□□□□ 0.77
PVT1-218ENST00000523328 SPIN1Q9Y657 262 aaPredicted RBP19.88■□□□□ 0.77
PVT1-218ENST00000523328 PEX11AO75192 247 aa19.87■□□□□ 0.77
PVT1-218ENST00000523328 LYPLA1O75608 230 aaPredicted RBP19.87■□□□□ 0.77
PVT1-218ENST00000523328 AK1P00568 194 aa19.87■□□□□ 0.77
PVT1-218ENST00000523328 MATN1P21941 496 aa19.87■□□□□ 0.77
PVT1-218ENST00000523328 PGM1P36871 562 aa19.87■□□□□ 0.77
PVT1-218ENST00000523328 MAPK14Q16539 360 aa19.87■□□□□ 0.77
PVT1-218ENST00000523328 ARHGAP11BQ3KRB8 267 aa19.87■□□□□ 0.77
PVT1-218ENST00000523328 XKR7Q5GH72 579 aa19.87■□□□□ 0.77
PVT1-218ENST00000523328 EIF3MQ7L2H7 374 aaKnown RBP19.87■□□□□ 0.77
PVT1-218ENST00000523328 RIMKLAQ8IXN7 391 aa19.87■□□□□ 0.77
PVT1-218ENST00000523328 MNS1Q8NEH6 495 aa19.87■□□□□ 0.77
PVT1-218ENST00000523328 C3orf49Q96BT1 292 aa19.87■□□□□ 0.77
PVT1-218ENST00000523328 C16orf45Q96MC5 204 aaPredicted RBP19.87■□□□□ 0.77
PVT1-218ENST00000523328 C1orf50Q9BV19 199 aa19.87■□□□□ 0.77
PVT1-218ENST00000523328 SLC7A10Q9NS82 523 aa19.87■□□□□ 0.77
PVT1-218ENST00000523328 FKBP7Q9Y680 259 aa19.87■□□□□ 0.77
PVT1-218ENST00000523328 DUXAA6NLW8 204 aa19.86■□□□□ 0.77
PVT1-218ENST00000523328 ANKRD28O15084 1053 aa19.86■□□□□ 0.77
PVT1-218ENST00000523328 CFLARO15519 480 aa19.86■□□□□ 0.77
PVT1-218ENST00000523328 TRIM13O60858 407 aa19.86■□□□□ 0.77
PVT1-218ENST00000523328 HNF1AP20823 631 aa19.86■□□□□ 0.77
PVT1-218ENST00000523328 MAGEA8P43361 318 aa19.86■□□□□ 0.77
PVT1-218ENST00000523328 SQLEQ14534 574 aa19.86■□□□□ 0.77
PVT1-218ENST00000523328 BHLHB9Q6PI77 547 aa19.86■□□□□ 0.77
PVT1-218ENST00000523328 CASP12Q6UXS9 341 aa19.86■□□□□ 0.77
PVT1-218ENST00000523328 ADGRG3Q86Y34 549 aa19.86■□□□□ 0.77
PVT1-218ENST00000523328 FOXN4Q96NZ1 517 aa19.86■□□□□ 0.77
PVT1-218ENST00000523328 BHLHE41Q9C0J9 482 aaPredicted RBP19.86■□□□□ 0.77
PVT1-218ENST00000523328 MOKQ9UQ07 419 aa19.86■□□□□ 0.77
PVT1-218ENST00000523328 FLVCR1Q9Y5Y0 555 aa19.86■□□□□ 0.77
PVT1-218ENST00000523328 COPEO14579 308 aa19.85■□□□□ 0.77
PVT1-218ENST00000523328 PGRP06401 933 aa19.85■□□□□ 0.77
PVT1-218ENST00000523328 SOAT1P35610 550 aa19.85■□□□□ 0.77
PVT1-218ENST00000523328 CLK1P49759 484 aaKnown RBP19.85■□□□□ 0.77
PVT1-218ENST00000523328 TSPO2Q5TGU0 170 aa19.85■□□□□ 0.77
PVT1-218ENST00000523328 LIPNQ5VXI9 398 aa19.85■□□□□ 0.77
PVT1-218ENST00000523328 GRINAQ7Z429 371 aa19.85■□□□□ 0.77
PVT1-218ENST00000523328 C6orf120Q7Z4R8 191 aa19.85■□□□□ 0.77
PVT1-218ENST00000523328 LSRQ86X29 649 aaPredicted RBP19.85■□□□□ 0.77
PVT1-218ENST00000523328 HOMEZQ8IX15 550 aa19.85■□□□□ 0.77
PVT1-218ENST00000523328 CLEC4FQ8N1N0 589 aa19.85■□□□□ 0.77
PVT1-218ENST00000523328 ZNF563Q8TA94 476 aa19.85■□□□□ 0.77
PVT1-218ENST00000523328 C3orf30Q96M34 536 aa19.85■□□□□ 0.77
PVT1-218ENST00000523328 PRPF18Q99633 342 aaKnown RBP19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 236.9 ms