RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 PTH2RP49190 550 aa18.33■□□□□ 0.52
SDCBP-209ENST00000522243 OR2B6P58173 313 aa18.33■□□□□ 0.52
SDCBP-209ENST00000522243 LRRC74AQ0VAA2 488 aa18.33■□□□□ 0.52
SDCBP-209ENST00000522243 STK11Q15831 433 aa18.33■□□□□ 0.52
SDCBP-209ENST00000522243 GTDC1Q4AE62 458 aa18.33■□□□□ 0.52
SDCBP-209ENST00000522243 BEND6Q5SZJ8 279 aaPredicted RBP18.33■□□□□ 0.52
SDCBP-209ENST00000522243 Q6ZT83 130 aa18.33■□□□□ 0.52
SDCBP-209ENST00000522243 MTDHQ86UE4 582 aaKnown RBP18.33■□□□□ 0.52
SDCBP-209ENST00000522243 CIARTQ8N365 385 aaPredicted RBP18.33■□□□□ 0.52
SDCBP-209ENST00000522243 TMEM171Q8WVE6 324 aa18.33■□□□□ 0.52
SDCBP-209ENST00000522243 OR52B2Q96RD2 323 aa18.33■□□□□ 0.52
SDCBP-209ENST00000522243 TMED7-TICAM2A0A0A6YYA0 188 aa18.32■□□□□ 0.52
SDCBP-209ENST00000522243 TMEM72A0PK05 275 aa18.32■□□□□ 0.52
SDCBP-209ENST00000522243 H7C1Q1 480 aa18.32■□□□□ 0.52
SDCBP-209ENST00000522243 ANP32DO95626 131 aa18.32■□□□□ 0.52
SDCBP-209ENST00000522243 KRT75O95678 551 aa18.32■□□□□ 0.52
SDCBP-209ENST00000522243 IGHV3-9P01782 118 aa18.32■□□□□ 0.52
SDCBP-209ENST00000522243 IL6P05231 212 aa18.32■□□□□ 0.52
SDCBP-209ENST00000522243 IGHV1-2P23083 117 aa18.32■□□□□ 0.52
SDCBP-209ENST00000522243 MAPK11Q15759 364 aa18.32■□□□□ 0.52
SDCBP-209ENST00000522243 NCMAPQ5T1S8 102 aa18.32■□□□□ 0.52
SDCBP-209ENST00000522243 MRPL2Q5T653 305 aaKnown RBP18.32■□□□□ 0.52
SDCBP-209ENST00000522243 ABLIM2Q6H8Q1 611 aa18.32■□□□□ 0.52
SDCBP-209ENST00000522243 ZNF611Q8N823 705 aa18.32■□□□□ 0.52
SDCBP-209ENST00000522243 OR9I1Q8NGQ6 314 aa18.32■□□□□ 0.52
SDCBP-209ENST00000522243 PIWIL2Q8TC59 973 aaKnown RBP18.32■□□□□ 0.52
SDCBP-209ENST00000522243 IGFBPL1Q8WX77 278 aa18.32■□□□□ 0.52
SDCBP-209ENST00000522243 HSD17B8Q92506 261 aa18.32■□□□□ 0.52
SDCBP-209ENST00000522243 NEUROG1Q92886 237 aa18.32■□□□□ 0.52
SDCBP-209ENST00000522243 ZHX1-C8orf76Q96EF9 292 aa18.32■□□□□ 0.52
SDCBP-209ENST00000522243 POTEKPQ9BYX7 375 aa18.32■□□□□ 0.52
SDCBP-209ENST00000522243 MTHFD2LQ9H903 347 aaPredicted RBP18.32■□□□□ 0.52
SDCBP-209ENST00000522243 TMED7Q9Y3B3 224 aa18.32■□□□□ 0.52
SDCBP-209ENST00000522243 RNF115Q9Y4L5 304 aa18.32■□□□□ 0.52
SDCBP-209ENST00000522243 ARID1AO14497 2285 aa18.32■□□□□ 0.52
SDCBP-209ENST00000522243 TRIM64A6NGJ6 449 aa18.31■□□□□ 0.52
SDCBP-209ENST00000522243 TRIM64BA6NI03 449 aa18.31■□□□□ 0.52
SDCBP-209ENST00000522243 ZNF716A6NP11 495 aa18.31■□□□□ 0.52
SDCBP-209ENST00000522243 SMAD7O15105 426 aaKnown RBP18.31■□□□□ 0.52
SDCBP-209ENST00000522243 RAMP1O60894 148 aa18.31■□□□□ 0.52
SDCBP-209ENST00000522243 PMS2P2O95744 297 aa18.31■□□□□ 0.52
SDCBP-209ENST00000522243 CD3EP07766 207 aa18.31■□□□□ 0.52
SDCBP-209ENST00000522243 ETFAP13804 333 aa18.31■□□□□ 0.52
SDCBP-209ENST00000522243 RPS4Y1P22090 263 aaKnown RBP18.31■□□□□ 0.52
SDCBP-209ENST00000522243 TACR3P29371 465 aa18.31■□□□□ 0.52
SDCBP-209ENST00000522243 CRATP43155 626 aa18.31■□□□□ 0.52
SDCBP-209ENST00000522243 MVDP53602 400 aa18.31■□□□□ 0.52
SDCBP-209ENST00000522243 TXNL4AP83876 142 aaKnown RBP18.31■□□□□ 0.52
SDCBP-209ENST00000522243 PRSS57Q6UWY2 283 aa18.31■□□□□ 0.52
SDCBP-209ENST00000522243 CLEC9AQ6UXN8 241 aa18.31■□□□□ 0.52
SDCBP-209ENST00000522243 VRK2Q86Y07 508 aa18.31■□□□□ 0.52
SDCBP-209ENST00000522243 CCDC103Q8IW40 242 aa18.31■□□□□ 0.52
SDCBP-209ENST00000522243 CMIPQ8IY22 773 aa18.31■□□□□ 0.52
SDCBP-209ENST00000522243 LILRB1Q8NHL6 650 aaPredicted RBP18.31■□□□□ 0.52
SDCBP-209ENST00000522243 GSX2Q9BZM3 304 aa18.31■□□□□ 0.52
SDCBP-209ENST00000522243 ESRP2Q9H6T0 727 aaKnown RBP18.31■□□□□ 0.52
SDCBP-209ENST00000522243 NGBQ9NPG2 151 aa18.31■□□□□ 0.52
SDCBP-209ENST00000522243 RLIMQ9NVW2 624 aa18.31■□□□□ 0.52
SDCBP-209ENST00000522243 ZIM2Q9NZV7 527 aa18.31■□□□□ 0.52
SDCBP-209ENST00000522243 EMC3Q9P0I2 261 aa18.31■□□□□ 0.52
SDCBP-209ENST00000522243 OSGIN1Q9UJX0 560 aa18.31■□□□□ 0.52
SDCBP-209ENST00000522243 LAMP3Q9UQV4 416 aa18.31■□□□□ 0.52
SDCBP-209ENST00000522243 NOSIPQ9Y314 301 aaKnown RBP18.31■□□□□ 0.52
SDCBP-209ENST00000522243 HDGFL3Q9Y3E1 203 aa18.31■□□□□ 0.52
SDCBP-209ENST00000522243 UBDO15205 165 aa18.3■□□□□ 0.52
SDCBP-209ENST00000522243 DBIP07108 87 aaKnown RBP18.3■□□□□ 0.52
SDCBP-209ENST00000522243 POLR2HP52434 150 aaKnown RBP18.3■□□□□ 0.52
SDCBP-209ENST00000522243 LTBQ06643 244 aa18.3■□□□□ 0.52
SDCBP-209ENST00000522243 GNA13Q14344 377 aa18.3■□□□□ 0.52
SDCBP-209ENST00000522243 GSTA3Q16772 222 aa18.3■□□□□ 0.52
SDCBP-209ENST00000522243 SEZ6L2Q6UXD5 910 aa18.3■□□□□ 0.52
SDCBP-209ENST00000522243 PEX5LQ8IYB4 626 aa18.3■□□□□ 0.52
SDCBP-209ENST00000522243 UBE2J2Q8N2K1 259 aa18.3■□□□□ 0.52
SDCBP-209ENST00000522243 VPS33AQ96AX1 596 aa18.3■□□□□ 0.52
SDCBP-209ENST00000522243 AURKBQ96GD4 344 aaPredicted RBP18.3■□□□□ 0.52
SDCBP-209ENST00000522243 TPT1P8Q9HAU6 139 aa18.3■□□□□ 0.52
SDCBP-209ENST00000522243 SDR39U1Q9NRG7 319 aaPredicted RBP18.3■□□□□ 0.52
SDCBP-209ENST00000522243 TMEM181Q9P2C4 612 aa18.3■□□□□ 0.52
SDCBP-209ENST00000522243 IGKV3D-15A0A087WSY6 115 aa18.29■□□□□ 0.52
SDCBP-209ENST00000522243 DPRXA6NFQ7 191 aa18.29■□□□□ 0.52
SDCBP-209ENST00000522243 CFAP73A6NFT4 308 aa18.29■□□□□ 0.52
SDCBP-209ENST00000522243 BCHEP06276 602 aa18.29■□□□□ 0.52
SDCBP-209ENST00000522243 GKN3PP0CG01 181 aa18.29■□□□□ 0.52
SDCBP-209ENST00000522243 IMPDH2P12268 514 aa18.29■□□□□ 0.52
SDCBP-209ENST00000522243 NTF4P34130 210 aa18.29■□□□□ 0.52
SDCBP-209ENST00000522243 HTR3AP46098 478 aa18.29■□□□□ 0.52
SDCBP-209ENST00000522243 CLK1P49759 484 aaKnown RBP18.29■□□□□ 0.52
SDCBP-209ENST00000522243 POLR2JP52435 117 aaKnown RBP18.29■□□□□ 0.52
SDCBP-209ENST00000522243 BSPH1Q075Z2 132 aa18.29■□□□□ 0.52
SDCBP-209ENST00000522243 EPS8Q12929 822 aa18.29■□□□□ 0.52
SDCBP-209ENST00000522243 PDK3Q15120 406 aa18.29■□□□□ 0.52
SDCBP-209ENST00000522243 RPS26P11Q5JNZ5 115 aaPredicted RBP18.29■□□□□ 0.52
SDCBP-209ENST00000522243 C6orf10Q5SRN2 563 aa18.29■□□□□ 0.52
SDCBP-209ENST00000522243 ZNF836Q6ZNA1 936 aa18.29■□□□□ 0.52
SDCBP-209ENST00000522243 KBTBD8Q8NFY9 601 aa18.29■□□□□ 0.52
SDCBP-209ENST00000522243 OR52P1PQ8NH57 321 aa18.29■□□□□ 0.52
SDCBP-209ENST00000522243 PIGXQ8TBF5 258 aa18.29■□□□□ 0.52
SDCBP-209ENST00000522243 ITCHQ96J02 903 aa18.29■□□□□ 0.52
SDCBP-209ENST00000522243 CXorf56Q9H5V9 222 aa18.29■□□□□ 0.52
SDCBP-209ENST00000522243 RMND5AQ9H871 391 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms