RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 BMP1P13497 986 aa15.1■□□□□ 0.01
USP42-207ENST00000521713 IRF2P14316 349 aa15.1■□□□□ 0.01
USP42-207ENST00000521713 NKX3-2P78367 333 aa15.1■□□□□ 0.01
USP42-207ENST00000521713 ACVR1Q04771 509 aa15.1■□□□□ 0.01
USP42-207ENST00000521713 HYAL1Q12794 435 aa15.1■□□□□ 0.01
USP42-207ENST00000521713 APOFQ13790 326 aa15.1■□□□□ 0.01
USP42-207ENST00000521713 VRK3Q8IV63 474 aa15.1■□□□□ 0.01
USP42-207ENST00000521713 TERB2Q8NHR7 220 aa15.1■□□□□ 0.01
USP42-207ENST00000521713 SPTSSAQ969W0 71 aa15.1■□□□□ 0.01
USP42-207ENST00000521713 KCTD12Q96CX2 325 aaKnown RBP15.1■□□□□ 0.01
USP42-207ENST00000521713 P2RY12Q9H244 342 aa15.1■□□□□ 0.01
USP42-207ENST00000521713 SLAMF7Q9NQ25 335 aa15.1■□□□□ 0.01
USP42-207ENST00000521713 RRP8O43159 456 aaKnown RBP15.09■□□□□ 0.01
USP42-207ENST00000521713 HRGP04196 525 aa15.09■□□□□ 0.01
USP42-207ENST00000521713 DRD5P21918 477 aa15.09■□□□□ 0.01
USP42-207ENST00000521713 PRSS3P35030 304 aa15.09■□□□□ 0.01
USP42-207ENST00000521713 DLSTP36957 453 aa15.09■□□□□ 0.01
USP42-207ENST00000521713 HBA1P69905 142 aa15.09■□□□□ 0.01
USP42-207ENST00000521713 PSPHP78330 225 aa15.09■□□□□ 0.01
USP42-207ENST00000521713 CSNK1G2P78368 415 aa15.09■□□□□ 0.01
USP42-207ENST00000521713 ADAMTS14Q8WXS8 1223 aa15.09■□□□□ 0.01
USP42-207ENST00000521713 FGF14Q92915 247 aa15.09■□□□□ 0.01
USP42-207ENST00000521713 ELP4Q96EB1 424 aa15.09■□□□□ 0.01
USP42-207ENST00000521713 UTP23Q9BRU9 249 aaKnown RBP15.09■□□□□ 0.01
USP42-207ENST00000521713 TMEM202A6NGA9 273 aa15.09■□□□□ 0.01
USP42-207ENST00000521713 IDUAP35475 653 aa15.09■□□□□ 0.01
USP42-207ENST00000521713 SLC5A12Q1EHB4 618 aa15.09■□□□□ 0.01
USP42-207ENST00000521713 IL20RBQ6UXL0 311 aa15.09■□□□□ 0.01
USP42-207ENST00000521713 TRIM46Q7Z4K8 759 aa15.09■□□□□ 0.01
USP42-207ENST00000521713 SPRYD4Q8WW59 207 aaPredicted RBP15.09■□□□□ 0.01
USP42-207ENST00000521713 NELFAQ9H3P2 528 aa15.09■□□□□ 0.01
USP42-207ENST00000521713 LAMA4Q16363 1823 aa15.09■□□□□ 0.01
USP42-207ENST00000521713 PPP1R3DO95685 299 aa15.09■□□□□ 0.01
USP42-207ENST00000521713 AMY2AP04746 511 aa15.09■□□□□ 0.01
USP42-207ENST00000521713 LILRA6Q6PI73 481 aa15.09■□□□□ 0.01
USP42-207ENST00000521713 PAPD4Q6PIY7 484 aaKnown RBP15.09■□□□□ 0.01
USP42-207ENST00000521713 KCTD20Q7Z5Y7 419 aa15.09■□□□□ 0.01
USP42-207ENST00000521713 ANKK1Q8NFD2 765 aa15.09■□□□□ 0.01
USP42-207ENST00000521713 WDR20Q8TBZ3 569 aa15.09■□□□□ 0.01
USP42-207ENST00000521713 C3orf49Q96BT1 292 aa15.09■□□□□ 0.01
USP42-207ENST00000521713 C19orf43Q9BQ61 176 aa15.09■□□□□ 0.01
USP42-207ENST00000521713 C1QTNF2Q9BXJ5 285 aa15.09■□□□□ 0.01
USP42-207ENST00000521713 SIAEQ9HAT2 523 aa15.09■□□□□ 0.01
USP42-207ENST00000521713 LTB4R2Q9NPC1 389 aa15.09■□□□□ 0.01
USP42-207ENST00000521713 RNF215Q9Y6U7 377 aa15.09■□□□□ 0.01
USP42-207ENST00000521713 NPIPA5A0A0B4J1W7 369 aa15.09■□□□□ 0.01
USP42-207ENST00000521713 EEF1E1-BLOC1S5C9J1V9 151 aa15.09■□□□□ 0.01
USP42-207ENST00000521713 NPIPA7E9PJI5 369 aa15.09■□□□□ 0.01
USP42-207ENST00000521713 ICMTO60725 284 aa15.09■□□□□ 0.01
USP42-207ENST00000521713 NPIPA8P0DM63 369 aa15.09■□□□□ 0.01
USP42-207ENST00000521713 BMP4P12644 408 aa15.09■□□□□ 0.01
USP42-207ENST00000521713 PTH2RP49190 550 aa15.09■□□□□ 0.01
USP42-207ENST00000521713 MAT1AQ00266 395 aaKnown RBP15.09■□□□□ 0.01
USP42-207ENST00000521713 B3GNT7Q8NFL0 401 aa15.09■□□□□ 0.01
USP42-207ENST00000521713 C16orf58Q96GQ5 468 aa15.09■□□□□ 0.01
USP42-207ENST00000521713 KLHL15Q96M94 604 aa15.09■□□□□ 0.01
USP42-207ENST00000521713 SLC6A5Q9Y345 797 aa15.09■□□□□ 0.01
USP42-207ENST00000521713 A0A1W2PPC4 97 aa15.08■□□□□ 0.01
USP42-207ENST00000521713 CTNSO60931 367 aa15.08■□□□□ 0.01
USP42-207ENST00000521713 ARAFP10398 606 aa15.08■□□□□ 0.01
USP42-207ENST00000521713 ZP2Q05996 745 aa15.08■□□□□ 0.01
USP42-207ENST00000521713 B3GNT8Q7Z7M8 397 aa15.08■□□□□ 0.01
USP42-207ENST00000521713 RETREG3Q86VR2 466 aa15.08■□□□□ 0.01
USP42-207ENST00000521713 NLRP8Q86W28 1048 aa15.08■□□□□ 0.01
USP42-207ENST00000521713 TMEM102Q8N9M5 508 aaPredicted RBP15.08■□□□□ 0.01
USP42-207ENST00000521713 SMAP2Q8WU79 429 aaPredicted RBP15.08■□□□□ 0.01
USP42-207ENST00000521713 KCNJ16Q9NPI9 418 aa15.08■□□□□ 0.01
USP42-207ENST00000521713 TM7SF3Q9NS93 570 aa15.08■□□□□ 0.01
USP42-207ENST00000521713 TESQ9UGI8 421 aaKnown RBP15.08■□□□□ 0.01
USP42-207ENST00000521713 SULT1B1O43704 296 aa15.08■□□□□ 0
USP42-207ENST00000521713 SSX5O60225 188 aa15.08■□□□□ 0
USP42-207ENST00000521713 NPPBP16860 134 aa15.08■□□□□ 0
USP42-207ENST00000521713 AMY2BP19961 511 aa15.08■□□□□ 0
USP42-207ENST00000521713 GLO1Q04760 184 aa15.08■□□□□ 0
USP42-207ENST00000521713 WDSUB1Q8N9V3 476 aa15.08■□□□□ 0
USP42-207ENST00000521713 FCRL1Q96LA6 429 aa15.08■□□□□ 0
USP42-207ENST00000521713 APMAPQ9HDC9 416 aa15.08■□□□□ 0
USP42-207ENST00000521713 PRMT8Q9NR22 394 aaPredicted RBP15.08■□□□□ 0
USP42-207ENST00000521713 INIPQ9NRY2 104 aa15.08■□□□□ 0
USP42-207ENST00000521713 DHCR7Q9UBM7 475 aaKnown RBP15.08■□□□□ 0
USP42-207ENST00000521713 ATXN7L1Q9ULK2 861 aaPredicted RBP15.08■□□□□ 0
USP42-207ENST00000521713 FRS3O43559 492 aa15.08■□□□□ 0
USP42-207ENST00000521713 GABARAPO95166 117 aa15.08■□□□□ 0
USP42-207ENST00000521713 ALPLP05186 524 aa15.08■□□□□ 0
USP42-207ENST00000521713 OR8U9P0C7N5 309 aa15.08■□□□□ 0
USP42-207ENST00000521713 SLC35E2P0CK97 266 aa15.08■□□□□ 0
USP42-207ENST00000521713 PTPN6P29350 595 aa15.08■□□□□ 0
USP42-207ENST00000521713 DDOSTP39656 456 aa15.08■□□□□ 0
USP42-207ENST00000521713 SSR4P51571 173 aa15.08■□□□□ 0
USP42-207ENST00000521713 DEFA6Q01524 100 aa15.08■□□□□ 0
USP42-207ENST00000521713 PEA15Q15121 130 aa15.08■□□□□ 0
USP42-207ENST00000521713 OR7A5Q15622 319 aa15.08■□□□□ 0
USP42-207ENST00000521713 RNF175Q8N4F7 328 aa15.08■□□□□ 0
USP42-207ENST00000521713 LMNTD1Q8N9Z9 388 aa15.08■□□□□ 0
USP42-207ENST00000521713 SLC46A1Q96NT5 459 aa15.08■□□□□ 0
USP42-207ENST00000521713 ZNF416Q9BWM5 594 aa15.08■□□□□ 0
USP42-207ENST00000521713 B3GNT2Q9NY97 397 aa15.08■□□□□ 0
USP42-207ENST00000521713 GLTPQ9NZD2 209 aa15.08■□□□□ 0
USP42-207ENST00000521713 ABRACLQ9P1F3 81 aa15.08■□□□□ 0
USP42-207ENST00000521713 POM121BA6NF01 834 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms