RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 TNFSF13O75888 250 aa6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 SEMA3DO95025 777 aa6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 ETFAP13804 333 aa6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 USF1P22415 310 aaPredicted RBP6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 ELK4P28324 431 aa6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 RPL3P39023 403 aaKnown RBP6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 CD79BP40259 229 aa6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 YAP1P46937 504 aaKnown RBP6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 CCR8P51685 355 aa6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 KCNJ10P78508 379 aa6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 LRRC74AQ0VAA2 488 aa6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 DUSP8Q13202 625 aa6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 LSAMPQ13449 338 aa6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 FAM53BQ14153 422 aa6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 PGGHGQ32M88 737 aa6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 IQCCQ4KMZ1 466 aa6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 BEX5Q5H9J7 111 aa6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 DCST1Q5T197 706 aa6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 CCNYL2Q5T2Q4 361 aa6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 GCNT6Q5T4J0 391 aa6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 KHDRBS2Q5VWX1 349 aaKnown RBP6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 OR2T5Q6IEZ7 315 aa6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 ADAM5Q6NVV9 412 aa6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 SHQ1Q6PI26 577 aaKnown RBP6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 UBE3DQ7Z6J8 389 aa6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 TSEN54Q7Z6J9 526 aaKnown RBP6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 CYP4Z1Q86W10 505 aa6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 PLD3Q8IV08 490 aa6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 OR2L8Q8NGY9 312 aa6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 OR2T29Q8NH02 315 aa6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 ADAMTS16Q8TE57 1224 aa6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 EDARADDQ8WWZ3 215 aa6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 MAL2Q969L2 176 aa6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 SLC22A18Q96BI1 424 aa6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 MTERF3Q96E29 417 aa6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 HSH2DQ96JZ2 352 aa6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 C7orf34Q96L11 122 aa6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 RDH12Q96NR8 316 aa6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 OR2A5Q96R48 311 aa6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 RBM4BQ9BQ04 359 aaKnown RBP6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 SLC35A5Q9BS91 424 aa6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 RBM4Q9BWF3 364 aaKnown RBP6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 RBCK1Q9BYM8 510 aa6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 PCBD2Q9H0N5 130 aa6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 CALHM2Q9HA72 323 aa6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 PROK2Q9HC23 129 aa6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 IL1RAPQ9NPH3 570 aa6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 ATAD3AQ9NVI7 634 aa6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 MED29Q9NX70 200 aa6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 AHSPQ9NZD4 102 aa6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 CORO2BQ9UQ03 480 aa6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 ATG4BQ9Y4P1 393 aa6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 U3KQV3 271 aa6.53□□□□□ -1.36
CTNNA1-227ENST00000521387 A0A0G2JN53 185 aa6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 TRBV11-1A0A0K0K1C0 115 aa6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 TRBC2A0A5B9 178 aa6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 CCDC160A6NGH7 325 aa6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 SAGE2PA6NJ88 616 aa6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 A8MVJ9 347 aa6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 MYO1GB0I1T2 1018 aa6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 H0YIG0 161 aa6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 NDUFS4O43181 175 aa6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 OR1F1O43749 312 aa6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 TMPRSS11DO60235 418 aa6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 TBX19O60806 448 aa6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 E2F6O75461 281 aa6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 RCBTB2O95199 551 aa6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 FKBP9O95302 570 aa6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 FABP3P05413 133 aa6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 CCL3P10147 92 aa6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 SLC25A16P16260 332 aa6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 HOXB6P17509 224 aaKnown RBP6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 POLR2IP36954 125 aaKnown RBP6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 PIGAP37287 484 aa6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 SOX3P41225 446 aa6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 CRATP43155 626 aa6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 DAPP51397 102 aa6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 SSR4P51571 173 aa6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 PRDX1Q06830 199 aaKnown RBP6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 LGALS3BPQ08380 585 aa6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 FAPQ12884 760 aa6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 SF3B4Q15427 424 aaKnown RBP eCLIP6.52□□□□□ -1.372e-6■■■■■ 27.7
CTNNA1-227ENST00000521387 CTU2Q2VPK5 515 aaKnown RBP6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 TTC23Q5W5X9 447 aa6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 LAIR2Q6ISS4 152 aa6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 FAM180BQ6P0A1 224 aa6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 IKBIPQ70UQ0 350 aa6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 PIWIL3Q7Z3Z3 882 aaKnown RBP6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 THAP5Q7Z6K1 395 aa6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 LRRC25Q8N386 305 aaPredicted RBP6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 ZNF525Q8N782 197 aa6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 C11orf65Q8NCR3 313 aa6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 ZNF555Q8NEP9 628 aa6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 OR2L3Q8NG85 312 aa6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 OR2A1Q8NGT9 310 aa6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 OR5AK3PQ8NH89 298 aa6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 NFKBIDQ8NI38 313 aa6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 C10orf105Q8TEF2 133 aa6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 SMAP2Q8WU79 429 aaPredicted RBP6.52□□□□□ -1.37
CTNNA1-227ENST00000521387 MRPL24Q96A35 216 aaKnown RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms