RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 RNPS1Q15287 305 aaKnown RBP18.43■□□□□ 0.54
TRIM35-203ENST00000521253 TMPPEQ6ZT21 453 aa18.43■□□□□ 0.54
TRIM35-203ENST00000521253 FAM222BQ8WU58 562 aa18.43■□□□□ 0.54
TRIM35-203ENST00000521253 RSPO3Q9BXY4 272 aaPredicted RBP18.43■□□□□ 0.54
TRIM35-203ENST00000521253 OR11A1Q9GZK7 315 aa18.43■□□□□ 0.54
TRIM35-203ENST00000521253 ARMC7Q9H6L4 198 aa18.43■□□□□ 0.54
TRIM35-203ENST00000521253 TMED7Q9Y3B3 224 aa18.43■□□□□ 0.54
TRIM35-203ENST00000521253 KLK2P20151 261 aa18.42■□□□□ 0.54
TRIM35-203ENST00000521253 SLC6A2P23975 617 aa18.42■□□□□ 0.54
TRIM35-203ENST00000521253 AGTR1P30556 359 aa18.42■□□□□ 0.54
TRIM35-203ENST00000521253 CAPRIN1Q14444 709 aaKnown RBP18.42■□□□□ 0.54
TRIM35-203ENST00000521253 ZNF550Q7Z398 422 aa18.42■□□□□ 0.54
TRIM35-203ENST00000521253 SERPINA11Q86U17 422 aa18.42■□□□□ 0.54
TRIM35-203ENST00000521253 PTOV1Q86YD1 416 aa18.42■□□□□ 0.54
TRIM35-203ENST00000521253 ARL5BQ96KC2 179 aa18.42■□□□□ 0.54
TRIM35-203ENST00000521253 ADAM19Q9H013 955 aa18.42■□□□□ 0.54
TRIM35-203ENST00000521253 PLSCR4Q9NRQ2 329 aa18.42■□□□□ 0.54
TRIM35-203ENST00000521253 TMEM72A0PK05 275 aa18.41■□□□□ 0.54
TRIM35-203ENST00000521253 SULT2B1O00204 365 aa18.41■□□□□ 0.54
TRIM35-203ENST00000521253 SMAD9O15198 467 aaKnown RBP18.41■□□□□ 0.54
TRIM35-203ENST00000521253 FRS3O43559 492 aa18.41■□□□□ 0.54
TRIM35-203ENST00000521253 PRKD3O94806 890 aa18.41■□□□□ 0.54
TRIM35-203ENST00000521253 FKBP2P26885 142 aaKnown RBP18.41■□□□□ 0.54
TRIM35-203ENST00000521253 PRKAR1BP31321 381 aa18.41■□□□□ 0.54
TRIM35-203ENST00000521253 CD79BP40259 229 aa18.41■□□□□ 0.54
TRIM35-203ENST00000521253 COPZ1P61923 177 aa18.41■□□□□ 0.54
TRIM35-203ENST00000521253 CSNK2A1P68400 391 aaPredicted RBP18.41■□□□□ 0.54
TRIM35-203ENST00000521253 CYP51A1Q16850 503 aa18.41■□□□□ 0.54
TRIM35-203ENST00000521253 TRMT5Q32P41 509 aaKnown RBP18.41■□□□□ 0.54
TRIM35-203ENST00000521253 KRT73Q86Y46 540 aa18.41■□□□□ 0.54
TRIM35-203ENST00000521253 TUSC5Q8IXB3 177 aa18.41■□□□□ 0.54
TRIM35-203ENST00000521253 SLC43A2Q8N370 569 aa18.41■□□□□ 0.54
TRIM35-203ENST00000521253 CADM2Q8N3J6 435 aa18.41■□□□□ 0.54
TRIM35-203ENST00000521253 HIPK4Q8NE63 616 aa18.41■□□□□ 0.54
TRIM35-203ENST00000521253 DNAJA3Q96EY1 480 aa18.41■□□□□ 0.54
TRIM35-203ENST00000521253 SLC39A3Q9BRY0 314 aa18.41■□□□□ 0.54
TRIM35-203ENST00000521253 KAT8Q9H7Z6 458 aaKnown RBP18.41■□□□□ 0.54
TRIM35-203ENST00000521253 KLHL13Q9P2N7 655 aa18.41■□□□□ 0.54
TRIM35-203ENST00000521253 HDGFL3Q9Y3E1 203 aa18.41■□□□□ 0.54
TRIM35-203ENST00000521253 CREBBPQ92793 2442 aa18.41■□□□□ 0.54
TRIM35-203ENST00000521253 ZNF208O43345 1280 aa18.4■□□□□ 0.54
TRIM35-203ENST00000521253 FESP07332 822 aa18.4■□□□□ 0.54
TRIM35-203ENST00000521253 EPXP11678 715 aa18.4■□□□□ 0.54
TRIM35-203ENST00000521253 AQP1P29972 269 aa18.4■□□□□ 0.54
TRIM35-203ENST00000521253 KCNJ5P48544 419 aa18.4■□□□□ 0.54
TRIM35-203ENST00000521253 PCYT1AP49585 367 aa18.4■□□□□ 0.54
TRIM35-203ENST00000521253 CLK1P49759 484 aaKnown RBP18.4■□□□□ 0.54
TRIM35-203ENST00000521253 HOXC5Q00444 222 aa18.4■□□□□ 0.54
TRIM35-203ENST00000521253 MAPRE2Q15555 327 aa18.4■□□□□ 0.54
TRIM35-203ENST00000521253 COQ5Q5HYK3 327 aa18.4■□□□□ 0.54
TRIM35-203ENST00000521253 TMEM201Q5SNT2 666 aa18.4■□□□□ 0.54
TRIM35-203ENST00000521253 REP15Q6BDI9 236 aa18.4■□□□□ 0.54
TRIM35-203ENST00000521253 WBP2NLQ6ICG8 309 aa18.4■□□□□ 0.54
TRIM35-203ENST00000521253 COMTD1Q86VU5 262 aa18.4■□□□□ 0.54
TRIM35-203ENST00000521253 TMEM200AQ86VY9 491 aa18.4■□□□□ 0.54
TRIM35-203ENST00000521253 SNX32Q86XE0 403 aa18.4■□□□□ 0.54
TRIM35-203ENST00000521253 C11orf65Q8NCR3 313 aa18.4■□□□□ 0.54
TRIM35-203ENST00000521253 SPATA5L1Q9BVQ7 753 aa18.4■□□□□ 0.54
TRIM35-203ENST00000521253 C12orf49Q9H741 205 aa18.4■□□□□ 0.54
TRIM35-203ENST00000521253 GP6Q9HCN6 339 aa18.4■□□□□ 0.54
TRIM35-203ENST00000521253 ELOVL5Q9NYP7 299 aa18.4■□□□□ 0.54
TRIM35-203ENST00000521253 ARMCX1Q9P291 453 aa18.4■□□□□ 0.54
TRIM35-203ENST00000521253 ING1Q9UK53 422 aaPredicted RBP18.4■□□□□ 0.54
TRIM35-203ENST00000521253 PRDM4Q9UKN5 801 aa18.4■□□□□ 0.54
TRIM35-203ENST00000521253 ANGPT4Q9Y264 503 aa18.4■□□□□ 0.54
TRIM35-203ENST00000521253 CAPN7Q9Y6W3 813 aa18.4■□□□□ 0.54
TRIM35-203ENST00000521253 LOC100653049A0A140TA62 436 aa18.39■□□□□ 0.53
TRIM35-203ENST00000521253 FXYD1O00168 92 aa18.39■□□□□ 0.53
TRIM35-203ENST00000521253 TPST1O60507 370 aa18.39■□□□□ 0.53
TRIM35-203ENST00000521253 CYTIPO60759 359 aa18.39■□□□□ 0.53
TRIM35-203ENST00000521253 CTAG2O75638 210 aa18.39■□□□□ 0.53
TRIM35-203ENST00000521253 KRT34O76011 436 aa18.39■□□□□ 0.53
TRIM35-203ENST00000521253 PMS2P2O95744 297 aa18.39■□□□□ 0.53
TRIM35-203ENST00000521253 YES1P07947 543 aa18.39■□□□□ 0.53
TRIM35-203ENST00000521253 POU2F1P14859 743 aa18.39■□□□□ 0.53
TRIM35-203ENST00000521253 ADSLP30566 484 aaPredicted RBP18.39■□□□□ 0.53
TRIM35-203ENST00000521253 CCKARP32238 428 aa18.39■□□□□ 0.53
TRIM35-203ENST00000521253 RBBP4Q09028 425 aa18.39■□□□□ 0.53
TRIM35-203ENST00000521253 CYLC2Q14093 348 aaPredicted RBP18.39■□□□□ 0.53
TRIM35-203ENST00000521253 EXOC3L2Q2M3D2 409 aa18.39■□□□□ 0.53
TRIM35-203ENST00000521253 MMEL1Q495T6 779 aa18.39■□□□□ 0.53
TRIM35-203ENST00000521253 DHRS4L2Q6PKH6 230 aa18.39■□□□□ 0.53
TRIM35-203ENST00000521253 NET1Q7Z628 596 aaPredicted RBP18.39■□□□□ 0.53
TRIM35-203ENST00000521253 SLC35B4Q969S0 331 aa18.39■□□□□ 0.53
TRIM35-203ENST00000521253 LRRC58Q96CX6 371 aa18.39■□□□□ 0.53
TRIM35-203ENST00000521253 DDIT4LQ96D03 193 aa18.39■□□□□ 0.53
TRIM35-203ENST00000521253 ZNF607Q96SK3 696 aa18.39■□□□□ 0.53
TRIM35-203ENST00000521253 PSD2Q9BQI7 771 aa18.39■□□□□ 0.53
TRIM35-203ENST00000521253 KLHL9Q9P2J3 617 aa18.39■□□□□ 0.53
TRIM35-203ENST00000521253 MYO9AB2RTY4 2548 aa18.39■□□□□ 0.53
TRIM35-203ENST00000521253 SPG11Q96JI7 2443 aa18.38■□□□□ 0.53
TRIM35-203ENST00000521253 ZC3H12DA2A288 527 aaKnown RBP18.38■□□□□ 0.53
TRIM35-203ENST00000521253 SH3D21A4FU49 640 aa18.38■□□□□ 0.53
TRIM35-203ENST00000521253 A6NNC1 897 aa18.38■□□□□ 0.53
TRIM35-203ENST00000521253 BBIP1A8MTZ0 92 aa18.38■□□□□ 0.53
TRIM35-203ENST00000521253 MRASO14807 208 aa18.38■□□□□ 0.53
TRIM35-203ENST00000521253 CXCR1P25024 350 aa18.38■□□□□ 0.53
TRIM35-203ENST00000521253 UGT2B10P36537 528 aa18.38■□□□□ 0.53
TRIM35-203ENST00000521253 MAP2K6P52564 334 aa18.38■□□□□ 0.53
TRIM35-203ENST00000521253 RASGEF1BQ0VAM2 473 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms