RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 XKR8Q9H6D3 395 aa12.56□□□□□ -0.4
PABPC1-208ENST00000519004 TMEM138Q9NPI0 162 aa12.56□□□□□ -0.4
PABPC1-208ENST00000519004 HINT3Q9NQE9 182 aaKnown RBP12.56□□□□□ -0.4
PABPC1-208ENST00000519004 ZNF337Q9Y3M9 751 aa12.56□□□□□ -0.4
PABPC1-208ENST00000519004 MYO16Q9Y6X6 1858 aa12.55□□□□□ -0.4
PABPC1-208ENST00000519004 ZC3H12DA2A288 527 aaKnown RBP12.55□□□□□ -0.4
PABPC1-208ENST00000519004 C19orf81C9J6K1 198 aa12.55□□□□□ -0.4
PABPC1-208ENST00000519004 H3BRB1 525 aa12.55□□□□□ -0.4
PABPC1-208ENST00000519004 GBAP04062 536 aa12.55□□□□□ -0.4
PABPC1-208ENST00000519004 GNSP15586 552 aa12.55□□□□□ -0.4
PABPC1-208ENST00000519004 ACRV1P26436 265 aa12.55□□□□□ -0.4
PABPC1-208ENST00000519004 HSD3B2P26439 372 aa12.55□□□□□ -0.4
PABPC1-208ENST00000519004 ACVR1BP36896 505 aa12.55□□□□□ -0.4
PABPC1-208ENST00000519004 PMELP40967 661 aa12.55□□□□□ -0.4
PABPC1-208ENST00000519004 UNQ6494/PRO21346Q6UXR6 183 aa12.55□□□□□ -0.4
PABPC1-208ENST00000519004 LRRTM1Q86UE6 522 aa12.55□□□□□ -0.4
PABPC1-208ENST00000519004 PARGQ86W56 976 aa12.55□□□□□ -0.4
PABPC1-208ENST00000519004 SCN4BQ8IWT1 228 aa12.55□□□□□ -0.4
PABPC1-208ENST00000519004 RNASE11Q8TAA1 199 aaKnown RBP12.55□□□□□ -0.4
PABPC1-208ENST00000519004 PPCDCQ96CD2 204 aa12.55□□□□□ -0.4
PABPC1-208ENST00000519004 CPNE2Q96FN4 548 aaPredicted RBP12.55□□□□□ -0.4
PABPC1-208ENST00000519004 DERL3Q96Q80 235 aa12.55□□□□□ -0.4
PABPC1-208ENST00000519004 LAT2Q9GZY6 243 aa12.55□□□□□ -0.4
PABPC1-208ENST00000519004 TSPAN10Q9H1Z9 355 aaPredicted RBP12.55□□□□□ -0.4
PABPC1-208ENST00000519004 CXorf36Q9H7Y0 433 aa12.55□□□□□ -0.4
PABPC1-208ENST00000519004 BRF2Q9HAW0 419 aa12.55□□□□□ -0.4
PABPC1-208ENST00000519004 MEPEQ9NQ76 525 aaPredicted RBP12.55□□□□□ -0.4
PABPC1-208ENST00000519004 CNIH4Q9P003 139 aa12.55□□□□□ -0.4
PABPC1-208ENST00000519004 ZMIZ1Q9ULJ6 1067 aa12.55□□□□□ -0.4
PABPC1-208ENST00000519004 AK6Q9Y3D8 172 aaKnown RBP12.55□□□□□ -0.4
PABPC1-208ENST00000519004 CXorf65A6NEN9 183 aa12.54□□□□□ -0.4
PABPC1-208ENST00000519004 ZNF705EA8MWA4 302 aaPredicted RBP12.54□□□□□ -0.4
PABPC1-208ENST00000519004 NUDT19A8MXV4 375 aa12.54□□□□□ -0.4
PABPC1-208ENST00000519004 UGDHO60701 494 aa12.54□□□□□ -0.4
PABPC1-208ENST00000519004 FGF19O95750 216 aa12.54□□□□□ -0.4
PABPC1-208ENST00000519004 ADH1CP00326 375 aa12.54□□□□□ -0.4
PABPC1-208ENST00000519004 MT-ND4LP03901 98 aa12.54□□□□□ -0.4
PABPC1-208ENST00000519004 RLN1P04808 185 aa12.54□□□□□ -0.4
PABPC1-208ENST00000519004 PRG2P13727 222 aa12.54□□□□□ -0.4
PABPC1-208ENST00000519004 ILF3Q12906 894 aaKnown RBP eCLIP12.54□□□□□ -0.4
PABPC1-208ENST00000519004 GLT8D1Q68CQ7 371 aa12.54□□□□□ -0.4
PABPC1-208ENST00000519004 CYB5R2Q6BCY4 276 aa12.54□□□□□ -0.4
PABPC1-208ENST00000519004 RPTNQ6XPR3 784 aa12.54□□□□□ -0.4
PABPC1-208ENST00000519004 NLGN1Q8N2Q7 840 aa12.54□□□□□ -0.4
PABPC1-208ENST00000519004 CA5BP1Q8WTZ4 195 aa12.54□□□□□ -0.4
PABPC1-208ENST00000519004 MYLIPQ8WY64 445 aa12.54□□□□□ -0.4
PABPC1-208ENST00000519004 MESP1Q9BRJ9 268 aa12.54□□□□□ -0.4
PABPC1-208ENST00000519004 C16orf70Q9BSU1 422 aa12.54□□□□□ -0.4
PABPC1-208ENST00000519004 SOX7Q9BT81 388 aa12.54□□□□□ -0.4
PABPC1-208ENST00000519004 IL21RQ9HBE5 538 aa12.54□□□□□ -0.4
PABPC1-208ENST00000519004 MMP26Q9NRE1 261 aa12.54□□□□□ -0.4
PABPC1-208ENST00000519004 ADARB2Q9NS39 739 aaKnown RBP12.54□□□□□ -0.4
PABPC1-208ENST00000519004 TMEM100Q9NV29 134 aa12.54□□□□□ -0.4
PABPC1-208ENST00000519004 ASF1AQ9Y294 204 aa12.54□□□□□ -0.4
PABPC1-208ENST00000519004 FAM96BQ9Y3D0 163 aa12.54□□□□□ -0.4
PABPC1-208ENST00000519004 PIKFYVEQ9Y2I7 2098 aa12.54□□□□□ -0.4
PABPC1-208ENST00000519004 A0A087WUU8 490 aa12.54□□□□□ -0.4
PABPC1-208ENST00000519004 PPM1DO15297 605 aa12.54□□□□□ -0.4
PABPC1-208ENST00000519004 EMC8O43402 210 aa12.54□□□□□ -0.4
PABPC1-208ENST00000519004 NTN1O95631 604 aa12.54□□□□□ -0.4
PABPC1-208ENST00000519004 CD8AP01732 235 aa12.54□□□□□ -0.4
PABPC1-208ENST00000519004 CERS1P27544 350 aa12.54□□□□□ -0.4
PABPC1-208ENST00000519004 CSNK1DP48730 415 aa12.54□□□□□ -0.4
PABPC1-208ENST00000519004 ZNF763Q0D2J5 394 aa12.54□□□□□ -0.4
PABPC1-208ENST00000519004 TSPAN31Q12999 210 aa12.54□□□□□ -0.4
PABPC1-208ENST00000519004 CBFBQ13951 182 aa12.54□□□□□ -0.4
PABPC1-208ENST00000519004 GPNMBQ14956 572 aa12.54□□□□□ -0.4
PABPC1-208ENST00000519004 TGIF1Q15583 401 aa12.54□□□□□ -0.4
PABPC1-208ENST00000519004 PLBD1Q6P4A8 553 aa12.54□□□□□ -0.4
PABPC1-208ENST00000519004 FAM111BQ6SJ93 734 aa12.54□□□□□ -0.4
PABPC1-208ENST00000519004 MAMDC2Q7Z304 686 aaPredicted RBP12.54□□□□□ -0.4
PABPC1-208ENST00000519004 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.54□□□□□ -0.4
PABPC1-208ENST00000519004 RASGEF1AQ8N9B8 481 aa12.54□□□□□ -0.4
PABPC1-208ENST00000519004 OR5J2Q8NH18 312 aa12.54□□□□□ -0.4
PABPC1-208ENST00000519004 ING5Q8WYH8 240 aa12.54□□□□□ -0.4
PABPC1-208ENST00000519004 RAB8BQ92930 207 aa12.54□□□□□ -0.4
PABPC1-208ENST00000519004 C2orf88Q9BSF0 95 aa12.54□□□□□ -0.4
PABPC1-208ENST00000519004 SGK2Q9HBY8 427 aa12.54□□□□□ -0.4
PABPC1-208ENST00000519004 PISDQ9UG56 409 aa12.54□□□□□ -0.4
PABPC1-208ENST00000519004 PLXNA3P51805 1871 aa12.54□□□□□ -0.4
PABPC1-208ENST00000519004 TRBV5-4A0A0C4DH59 114 aa12.53□□□□□ -0.4
PABPC1-208ENST00000519004 FAM183AA6NL82 134 aa12.53□□□□□ -0.4
PABPC1-208ENST00000519004 H0YIV9 168 aa12.53□□□□□ -0.4
PABPC1-208ENST00000519004 BLOC1S5-TXNDC5H3BN57 136 aa12.53□□□□□ -0.4
PABPC1-208ENST00000519004 TMEM189-UBE2V1I3L0A0 370 aa12.53□□□□□ -0.4
PABPC1-208ENST00000519004 GNRH1P01148 92 aa12.53□□□□□ -0.4
PABPC1-208ENST00000519004 RB1P06400 928 aa12.53□□□□□ -0.4
PABPC1-208ENST00000519004 RHOP08100 348 aa12.53□□□□□ -0.4
PABPC1-208ENST00000519004 CPT2P23786 658 aa12.53□□□□□ -0.4
PABPC1-208ENST00000519004 MPIP34949 423 aa12.53□□□□□ -0.4
PABPC1-208ENST00000519004 CPOQ8IVL8 374 aa12.53□□□□□ -0.4
PABPC1-208ENST00000519004 GTPBP8Q8N3Z3 284 aaPredicted RBP12.53□□□□□ -0.4
PABPC1-208ENST00000519004 TMEM40Q8WWA1 233 aa12.53□□□□□ -0.4
PABPC1-208ENST00000519004 LINC01599Q8WXQ3 324 aa12.53□□□□□ -0.4
PABPC1-208ENST00000519004 OCSTAMPQ9BR26 566 aa12.53□□□□□ -0.4
PABPC1-208ENST00000519004 TMEM27Q9HBJ8 222 aa12.53□□□□□ -0.4
PABPC1-208ENST00000519004 MRPS30Q9NP92 439 aaKnown RBP12.53□□□□□ -0.4
PABPC1-208ENST00000519004 CA14Q9ULX7 337 aa12.53□□□□□ -0.4
PABPC1-208ENST00000519004 PIAS3Q9Y6X2 628 aa12.53□□□□□ -0.4
PABPC1-208ENST00000519004 MYO10Q9HD67 2058 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms