RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 OR2L2Q8NH16 312 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 OR5W2Q8NH69 310 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 PIGXQ8TBF5 258 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 DNAJB14Q8TBM8 379 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 RNASEH2CQ8TDP1 164 aaKnown RBP4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 GNPDA2Q8TDQ7 276 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 THAP3Q8WTV1 239 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 CLEC4DQ8WXI8 215 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 DPF1Q92782 380 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 KISS1RQ969F8 398 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 GJA10Q969M2 543 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 HIST1H2BAQ96A08 127 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 PNPLA2Q96AD5 504 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 SAT2Q96F10 170 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 C14orf79Q96F83 325 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 CPB2Q96IY4 423 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 LOXL4Q96JB6 756 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 C8orf49Q96NF6 230 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 MS4A4EQ96PG1 132 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 OR2M4Q96R27 311 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 OR1F2PQ96R84 312 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 GAL3ST4Q96RP7 486 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 INTS14Q96SY0 518 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 EGFL8Q99944 293 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 MSTO1Q9BUK6 570 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 PBDC1Q9BVG4 233 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 HAPLN2Q9GZV7 340 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 MFFQ9GZY8 342 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 PCBD2Q9H0N5 130 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 CSTL1Q9H114 145 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 REEP1Q9H902 201 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 SEC61A2Q9H9S3 476 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 LMAN1LQ9HAT1 526 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 IL1RL2Q9HB29 575 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 SLC25A19Q9HC21 320 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 MMP26Q9NRE1 261 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 PNO1Q9NRX1 252 aaKnown RBP4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 POT1Q9NUX5 634 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 DCAF13Q9NV06 445 aaKnown RBP4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 DDIT4Q9NX09 232 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 NDUFB11Q9NX14 153 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 SOHLH2Q9NX45 425 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 SPG21Q9NZD8 308 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 RBPJLQ9UBG7 517 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 RPS6KB2Q9UBS0 482 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 ST3GAL5Q9UNP4 418 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 ZFP30Q9Y2G7 519 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 RPL36Q9Y3U8 105 aaKnown RBP4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 MMP24Q9Y5R2 645 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 AKAP11Q9UKA4 1901 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 MEGF6O75095 1541 aa4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 AFDNP55196 1824 aaKnown RBP4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 SLX4Q8IY92 1834 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 TEX13DA0A0J9YY54 714 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 A0A1B0GV72 72 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 TMEM269A0A1B0GVZ9 245 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 SERTM2A0A1B0GWG4 89 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 KLRG2A4D1S0 409 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 OR5H15A6NDH6 313 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 OR5H1A6NKK0 313 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 GJE1A6NN92 205 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 NPIPA7E9PJI5 369 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 FXYD1O00168 92 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 MFNGO00587 321 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 CCSO14618 274 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 DVL2O14641 736 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 CTDSPLO15194 276 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 ARPC5O15511 151 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 GPR42O15529 346 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 RGS14O43566 566 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 SYT7O43581 403 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 OR10H3O60404 316 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 ENTPD6O75354 484 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 ANXA9O76027 345 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 KAT7O95251 611 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 NFATC1O95644 943 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 FGF19O95750 216 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 LRG1P02750 347 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 MT-ND5P03915 603 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 NPIPA8P0DM63 369 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 ERCC2P18074 760 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 CXCL2P19875 107 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 TBPP20226 339 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 MSR1P21757 451 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 HRH2P25021 359 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 APEX1P27695 318 aaKnown RBP4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 AKT1P31749 480 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 TGFBR1P36897 503 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 PBX3P40426 434 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 RBM34P42696 430 aaKnown RBP4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 CRYBB2P43320 205 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 OR3A1P47881 315 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 GPR15P49685 360 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 STK19P49842 368 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 TNFSF10P50591 281 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 TDGF1P3P51864 188 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 POLR2JP52435 117 aaKnown RBP4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 TAS2R39P59534 338 aa4.45□□□□□ -1.7
HMGB1P19-201ENST00000517578 NKX6-1P78426 367 aaPredicted RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms