RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 TRIM15Q9C019 465 aa8.9□□□□□ -0.98
CLN8-202ENST00000517514 OR11A1Q9GZK7 315 aa8.9□□□□□ -0.98
CLN8-202ENST00000517514 LDAHQ9H6V9 325 aa8.9□□□□□ -0.98
CLN8-202ENST00000517514 TMEM185BQ9H7F4 350 aa8.9□□□□□ -0.98
CLN8-202ENST00000517514 C12orf10Q9HB07 376 aa8.9□□□□□ -0.98
CLN8-202ENST00000517514 SLC7A7Q9UM01 511 aa8.9□□□□□ -0.98
CLN8-202ENST00000517514 PHF3Q92576 2039 aaKnown RBP8.9□□□□□ -0.99
CLN8-202ENST00000517514 MED12LQ86YW9 2145 aa8.89□□□□□ -0.99
CLN8-202ENST00000517514 H3BML4 177 aa8.89□□□□□ -0.99
CLN8-202ENST00000517514 CHP2O43745 196 aa8.89□□□□□ -0.99
CLN8-202ENST00000517514 RRP9O43818 475 aaKnown RBP8.89□□□□□ -0.99
CLN8-202ENST00000517514 FZD7O75084 574 aa8.89□□□□□ -0.99
CLN8-202ENST00000517514 FKBP6O75344 327 aa8.89□□□□□ -0.99
CLN8-202ENST00000517514 ENTPD5O75356 428 aa8.89□□□□□ -0.99
CLN8-202ENST00000517514 CIB2O75838 187 aa8.89□□□□□ -0.99
CLN8-202ENST00000517514 ACTL6AO96019 429 aa8.89□□□□□ -0.99
CLN8-202ENST00000517514 FABP3P05413 133 aa8.89□□□□□ -0.99
CLN8-202ENST00000517514 RAP2AP10114 183 aa8.89□□□□□ -0.99
CLN8-202ENST00000517514 IMPDH2P12268 514 aa8.89□□□□□ -0.99
CLN8-202ENST00000517514 CPN1P15169 458 aa8.89□□□□□ -0.99
CLN8-202ENST00000517514 RHCEP18577 417 aa8.89□□□□□ -0.99
CLN8-202ENST00000517514 ELK4P28324 431 aa8.89□□□□□ -0.99
CLN8-202ENST00000517514 SLC7A1P30825 629 aa8.89□□□□□ -0.99
CLN8-202ENST00000517514 APOBEC1P41238 236 aaKnown RBP8.89□□□□□ -0.99
CLN8-202ENST00000517514 LIMS1P48059 325 aa8.89□□□□□ -0.99
CLN8-202ENST00000517514 UGT2B15P54855 530 aa8.89□□□□□ -0.99
CLN8-202ENST00000517514 RAC1P63000 192 aa8.89□□□□□ -0.99
CLN8-202ENST00000517514 CHRNB3Q05901 458 aa8.89□□□□□ -0.99
CLN8-202ENST00000517514 LTBQ06643 244 aa8.89□□□□□ -0.99
CLN8-202ENST00000517514 SELENBP1Q13228 472 aa8.89□□□□□ -0.99
CLN8-202ENST00000517514 SEC23BQ15437 767 aa8.89□□□□□ -0.99
CLN8-202ENST00000517514 IGFBP7Q16270 282 aa8.89□□□□□ -0.99
CLN8-202ENST00000517514 ALG10BQ5I7T1 473 aa8.89□□□□□ -0.99
CLN8-202ENST00000517514 ULK3Q6PHR2 472 aa8.89□□□□□ -0.99
CLN8-202ENST00000517514 PLXDC2Q6UX71 529 aa8.89□□□□□ -0.99
CLN8-202ENST00000517514 Q6ZPB1 254 aaPredicted RBP8.89□□□□□ -0.99
CLN8-202ENST00000517514 TMEM179BQ7Z7N9 219 aa8.89□□□□□ -0.99
CLN8-202ENST00000517514 LILRA2Q8N149 483 aa8.89□□□□□ -0.99
CLN8-202ENST00000517514 GHDCQ8N2G8 530 aa8.89□□□□□ -0.99
CLN8-202ENST00000517514 TMEM255BQ8WV15 326 aa8.89□□□□□ -0.99
CLN8-202ENST00000517514 DNAJA4Q8WW22 397 aaPredicted RBP8.89□□□□□ -0.99
CLN8-202ENST00000517514 DNAJA3Q96EY1 480 aa8.89□□□□□ -0.99
CLN8-202ENST00000517514 RAB3IPQ96QF0 476 aaPredicted RBP8.89□□□□□ -0.99
CLN8-202ENST00000517514 POLR2J2Q9GZM3 115 aaKnown RBP8.89□□□□□ -0.99
CLN8-202ENST00000517514 PRDM14Q9GZV8 571 aa8.89□□□□□ -0.99
CLN8-202ENST00000517514 POLR2J3Q9H1A7 115 aaKnown RBP8.89□□□□□ -0.99
CLN8-202ENST00000517514 NMNAT1Q9HAN9 279 aaPredicted RBP8.89□□□□□ -0.99
CLN8-202ENST00000517514 NTN4Q9HB63 628 aa8.89□□□□□ -0.99
CLN8-202ENST00000517514 TMEM27Q9HBJ8 222 aa8.89□□□□□ -0.99
CLN8-202ENST00000517514 MEPEQ9NQ76 525 aaPredicted RBP8.89□□□□□ -0.99
CLN8-202ENST00000517514 AGPAT4Q9NRZ5 378 aa8.89□□□□□ -0.99
CLN8-202ENST00000517514 PNPLA3Q9NST1 481 aa8.89□□□□□ -0.99
CLN8-202ENST00000517514 CHRNA9Q9UGM1 479 aa8.89□□□□□ -0.99
CLN8-202ENST00000517514 AP4B1Q9Y6B7 739 aa8.89□□□□□ -0.99
CLN8-202ENST00000517514 ZNF462Q96JM2 2506 aa8.89□□□□□ -0.99
CLN8-202ENST00000517514 DOCK7Q96N67 2140 aa8.89□□□□□ -0.99
CLN8-202ENST00000517514 POLEQ07864 2286 aa8.88□□□□□ -0.99
CLN8-202ENST00000517514 UBR5O95071 2799 aaPredicted RBP8.88□□□□□ -0.99
CLN8-202ENST00000517514 A0A087WUU8 490 aa8.88□□□□□ -0.99
CLN8-202ENST00000517514 TRBV4-1A0A0J9YWV2 114 aa8.88□□□□□ -0.99
CLN8-202ENST00000517514 A0A1W2PNR3 127 aa8.88□□□□□ -0.99
CLN8-202ENST00000517514 OR14I1A6ND48 311 aa8.88□□□□□ -0.99
CLN8-202ENST00000517514 ZNF814B7Z6K7 855 aa8.88□□□□□ -0.99
CLN8-202ENST00000517514 FAM47E-STBD1D6RA91 191 aa8.88□□□□□ -0.99
CLN8-202ENST00000517514 FTCDNL1E5RQL4 147 aa8.88□□□□□ -0.99
CLN8-202ENST00000517514 NPIPA2E9PIF3 369 aa8.88□□□□□ -0.99
CLN8-202ENST00000517514 NPIPA3F8WFD2 350 aa8.88□□□□□ -0.99
CLN8-202ENST00000517514 ADAMDEC1O15204 470 aa8.88□□□□□ -0.99
CLN8-202ENST00000517514 ZNF208O43345 1280 aa8.88□□□□□ -0.99
CLN8-202ENST00000517514 PIP5K1CO60331 668 aa8.88□□□□□ -0.99
CLN8-202ENST00000517514 TIPRLO75663 272 aa8.88□□□□□ -0.99
CLN8-202ENST00000517514 UQCRBP14927 111 aa8.88□□□□□ -0.99
CLN8-202ENST00000517514 SFTPDP35247 375 aa8.88□□□□□ -0.99
CLN8-202ENST00000517514 HTR3AP46098 478 aa8.88□□□□□ -0.99
CLN8-202ENST00000517514 TAS2R41P59536 307 aa8.88□□□□□ -0.99
CLN8-202ENST00000517514 COPZ1P61923 177 aa8.88□□□□□ -0.99
CLN8-202ENST00000517514 TLE1Q04724 770 aa8.88□□□□□ -0.99
CLN8-202ENST00000517514 PPP1R8Q12972 351 aaKnown RBP8.88□□□□□ -0.99
CLN8-202ENST00000517514 MRPL49Q13405 166 aaKnown RBP8.88□□□□□ -0.99
CLN8-202ENST00000517514 BCL2A1Q16548 175 aa8.88□□□□□ -0.99
CLN8-202ENST00000517514 TMEM176BQ3YBM2 270 aaPredicted RBP8.88□□□□□ -0.99
CLN8-202ENST00000517514 FAM98BQ52LJ0 330 aaKnown RBP8.88□□□□□ -0.99
CLN8-202ENST00000517514 SWT1Q5T5J6 900 aaKnown RBP8.88□□□□□ -0.99
CLN8-202ENST00000517514 RTL6Q6ICC9 239 aa8.88□□□□□ -0.99
CLN8-202ENST00000517514 HMBOX1Q6NT76 420 aa8.88□□□□□ -0.99
CLN8-202ENST00000517514 ARHGAP11AQ6P4F7 1023 aa8.88□□□□□ -0.99
CLN8-202ENST00000517514 TBPL2Q6SJ96 375 aa8.88□□□□□ -0.99
CLN8-202ENST00000517514 GFRALQ6UXV0 394 aa8.88□□□□□ -0.99
CLN8-202ENST00000517514 ADGRE4PQ86SQ3 457 aa8.88□□□□□ -0.99
CLN8-202ENST00000517514 ST6GALNAC3Q8NDV1 305 aa8.88□□□□□ -0.99
CLN8-202ENST00000517514 ATP6V1C2Q8NEY4 427 aa8.88□□□□□ -0.99
CLN8-202ENST00000517514 OR4C15Q8NGM1 316 aa8.88□□□□□ -0.99
CLN8-202ENST00000517514 OR5M9Q8NGP3 310 aa8.88□□□□□ -0.99
CLN8-202ENST00000517514 FAM57AQ8TBR7 257 aa8.88□□□□□ -0.99
CLN8-202ENST00000517514 SLC7A13Q8TCU3 470 aa8.88□□□□□ -0.99
CLN8-202ENST00000517514 PYDC1Q8WXC3 89 aa8.88□□□□□ -0.99
CLN8-202ENST00000517514 SMPDL3BQ92485 455 aa8.88□□□□□ -0.99
CLN8-202ENST00000517514 TAAR8Q969N4 342 aa8.88□□□□□ -0.99
CLN8-202ENST00000517514 KTI12Q96EK9 354 aaPredicted RBP8.88□□□□□ -0.99
CLN8-202ENST00000517514 ZNF845Q96IR2 970 aaPredicted RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms