RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 ST8SIA4Q92187 359 aa-2.18□□□□□ -2.76
RNU6-539P-201ENST00000516665 GPATCH3Q96I76 525 aa-2.18□□□□□ -2.76
RNU6-539P-201ENST00000516665 SLCO1B3Q9NPD5 702 aa-2.18□□□□□ -2.76
RNU6-539P-201ENST00000516665 TREM2Q9NZC2 230 aa-2.18□□□□□ -2.76
RNU6-539P-201ENST00000516665 TUBGCP4Q9UGJ1 667 aa-2.18□□□□□ -2.76
RNU6-539P-201ENST00000516665 SAMD4AQ9UPU9 718 aaKnown RBP-2.18□□□□□ -2.76
RNU6-539P-201ENST00000516665 RNF6Q9Y252 685 aa-2.18□□□□□ -2.76
RNU6-539P-201ENST00000516665 SLC9A8Q9Y2E8 581 aa-2.18□□□□□ -2.76
RNU6-539P-201ENST00000516665 NFASCO94856 1347 aa-2.18□□□□□ -2.76
RNU6-539P-201ENST00000516665 FGD5Q6ZNL6 1462 aa-2.19□□□□□ -2.76
RNU6-539P-201ENST00000516665 HIVEP1P15822 2718 aa-2.19□□□□□ -2.76
RNU6-539P-201ENST00000516665 ILVBLA1L0T0 632 aa-2.19□□□□□ -2.76
RNU6-539P-201ENST00000516665 PRSS37A4D1T9 235 aa-2.19□□□□□ -2.76
RNU6-539P-201ENST00000516665 MYO1GB0I1T2 1018 aa-2.19□□□□□ -2.76
RNU6-539P-201ENST00000516665 PDLIM1O00151 329 aa-2.19□□□□□ -2.76
RNU6-539P-201ENST00000516665 BPY2O14599 106 aa-2.19□□□□□ -2.76
RNU6-539P-201ENST00000516665 IGLV7-43P04211 117 aa-2.19□□□□□ -2.76
RNU6-539P-201ENST00000516665 FCER2P06734 321 aa-2.19□□□□□ -2.76
RNU6-539P-201ENST00000516665 ACSM4P0C7M7 580 aa-2.19□□□□□ -2.76
RNU6-539P-201ENST00000516665 ZDHHC11BP0C7U3 371 aa-2.19□□□□□ -2.76
RNU6-539P-201ENST00000516665 ALOX12P18054 663 aa-2.19□□□□□ -2.76
RNU6-539P-201ENST00000516665 IL1RNP18510 177 aa-2.19□□□□□ -2.76
RNU6-539P-201ENST00000516665 GALR1P47211 349 aa-2.19□□□□□ -2.76
RNU6-539P-201ENST00000516665 TMED10P49755 219 aaKnown RBP-2.19□□□□□ -2.76
RNU6-539P-201ENST00000516665 ERCC8Q13216 396 aa-2.19□□□□□ -2.76
RNU6-539P-201ENST00000516665 PSMD6Q15008 389 aa-2.19□□□□□ -2.76
RNU6-539P-201ENST00000516665 OR1C1Q15619 314 aa-2.19□□□□□ -2.76
RNU6-539P-201ENST00000516665 TEX44Q53QW1 395 aa-2.19□□□□□ -2.76
RNU6-539P-201ENST00000516665 BOLA3Q53S33 107 aa-2.19□□□□□ -2.76
RNU6-539P-201ENST00000516665 OR2A2Q6IF42 318 aa-2.19□□□□□ -2.76
RNU6-539P-201ENST00000516665 TSEN54Q7Z6J9 526 aaKnown RBP-2.19□□□□□ -2.76
RNU6-539P-201ENST00000516665 OR4F17Q8NGA8 305 aa-2.19□□□□□ -2.76
RNU6-539P-201ENST00000516665 OR8U1Q8NH10 309 aa-2.19□□□□□ -2.76
RNU6-539P-201ENST00000516665 FAM46BQ96A09 425 aa-2.19□□□□□ -2.76
RNU6-539P-201ENST00000516665 OR4F4Q96R69 305 aa-2.19□□□□□ -2.76
RNU6-539P-201ENST00000516665 ISYNA1Q9NPH2 558 aa-2.19□□□□□ -2.76
RNU6-539P-201ENST00000516665 STARD5Q9NSY2 213 aa-2.19□□□□□ -2.76
RNU6-539P-201ENST00000516665 LHX3Q9UBR4 397 aa-2.19□□□□□ -2.76
RNU6-539P-201ENST00000516665 USP16Q9Y5T5 823 aa-2.19□□□□□ -2.76
RNU6-539P-201ENST00000516665 STAB2Q8WWQ8 2551 aa-2.19□□□□□ -2.76
RNU6-539P-201ENST00000516665 OTOFQ9HC10 1997 aa-2.19□□□□□ -2.76
RNU6-539P-201ENST00000516665 PXDNLA1KZ92 1463 aa-2.2□□□□□ -2.76
RNU6-539P-201ENST00000516665 SYNJ2O15056 1496 aa-2.2□□□□□ -2.76
RNU6-539P-201ENST00000516665 LOC100131303A0A0U1RQF7 123 aa-2.2□□□□□ -2.76
RNU6-539P-201ENST00000516665 A0A0U1RQV1 116 aa-2.2□□□□□ -2.76
RNU6-539P-201ENST00000516665 KIF2AO00139 706 aaPredicted RBP-2.2□□□□□ -2.76
RNU6-539P-201ENST00000516665 CLEC3BP05452 202 aa-2.2□□□□□ -2.76
RNU6-539P-201ENST00000516665 UBTFL1P0CB47 393 aaPredicted RBP-2.2□□□□□ -2.76
RNU6-539P-201ENST00000516665 EZRP15311 586 aaKnown RBP-2.2□□□□□ -2.76
RNU6-539P-201ENST00000516665 VCLP18206 1134 aa-2.2□□□□□ -2.76
RNU6-539P-201ENST00000516665 PPARGP37231 505 aaPredicted RBP-2.2□□□□□ -2.76
RNU6-539P-201ENST00000516665 NAMPTP43490 491 aa-2.2□□□□□ -2.76
RNU6-539P-201ENST00000516665 LGALS7P47929 136 aa-2.2□□□□□ -2.76
RNU6-539P-201ENST00000516665 VAMP2P63027 116 aa-2.2□□□□□ -2.76
RNU6-539P-201ENST00000516665 LIPEQ05469 1076 aa-2.2□□□□□ -2.76
RNU6-539P-201ENST00000516665 RAB40BQ12829 278 aa-2.2□□□□□ -2.76
RNU6-539P-201ENST00000516665 PDIA5Q14554 519 aa-2.2□□□□□ -2.76
RNU6-539P-201ENST00000516665 SNAPC1Q16533 368 aa-2.2□□□□□ -2.76
RNU6-539P-201ENST00000516665 APOBEC3HQ6NTF7 200 aaKnown RBP-2.2□□□□□ -2.76
RNU6-539P-201ENST00000516665 ABHD13Q7L211 337 aa-2.2□□□□□ -2.76
RNU6-539P-201ENST00000516665 LRRC70Q7Z2Q7 622 aa-2.2□□□□□ -2.76
RNU6-539P-201ENST00000516665 GRAMD2AQ8IUY3 354 aa-2.2□□□□□ -2.76
RNU6-539P-201ENST00000516665 DIS3L2Q8IYB7 885 aaKnown RBP-2.2□□□□□ -2.76
RNU6-539P-201ENST00000516665 LINC00518Q8N0U6 118 aa-2.2□□□□□ -2.76
RNU6-539P-201ENST00000516665 C2orf73Q8N5S3 287 aaPredicted RBP-2.2□□□□□ -2.76
RNU6-539P-201ENST00000516665 OR9A4Q8NGU2 314 aa-2.2□□□□□ -2.76
RNU6-539P-201ENST00000516665 ZCRB1Q8TBF4 217 aaKnown RBP-2.2□□□□□ -2.76
RNU6-539P-201ENST00000516665 PHYHIPQ92561 330 aa-2.2□□□□□ -2.76
RNU6-539P-201ENST00000516665 TBL1YQ9BQ87 522 aa-2.2□□□□□ -2.76
RNU6-539P-201ENST00000516665 ROGDIQ9GZN7 287 aa-2.2□□□□□ -2.76
RNU6-539P-201ENST00000516665 ZSCAN16Q9H4T2 348 aaPredicted RBP-2.2□□□□□ -2.76
RNU6-539P-201ENST00000516665 TM9SF3Q9HD45 589 aa-2.2□□□□□ -2.76
RNU6-539P-201ENST00000516665 CD84Q9UIB8 345 aa-2.2□□□□□ -2.76
RNU6-539P-201ENST00000516665 KCNK6Q9Y257 313 aa-2.2□□□□□ -2.76
RNU6-539P-201ENST00000516665 MRPS16Q9Y3D3 137 aaKnown RBP-2.2□□□□□ -2.76
RNU6-539P-201ENST00000516665 F11RQ9Y624 299 aaKnown RBP-2.2□□□□□ -2.76
RNU6-539P-201ENST00000516665 U3KQA8 63 aa-2.2□□□□□ -2.76
RNU6-539P-201ENST00000516665 MYCBP2O75592 4640 aa-2.2□□□□□ -2.76
RNU6-539P-201ENST00000516665 EP300Q09472 2414 aaPredicted RBP-2.21□□□□□ -2.76
RNU6-539P-201ENST00000516665 ANKDD1BA6NHY2 528 aa-2.21□□□□□ -2.76
RNU6-539P-201ENST00000516665 C10orf142B7Z368 130 aa-2.21□□□□□ -2.76
RNU6-539P-201ENST00000516665 EI24O14681 340 aa-2.21□□□□□ -2.76
RNU6-539P-201ENST00000516665 RP2O75695 350 aa-2.21□□□□□ -2.76
RNU6-539P-201ENST00000516665 SLC25A14O95258 325 aaPredicted RBP-2.21□□□□□ -2.76
RNU6-539P-201ENST00000516665 NDUFB10O96000 172 aa-2.21□□□□□ -2.76
RNU6-539P-201ENST00000516665 MBL2P11226 248 aaPredicted RBP-2.21□□□□□ -2.76
RNU6-539P-201ENST00000516665 CYP3A5P20815 502 aa-2.21□□□□□ -2.76
RNU6-539P-201ENST00000516665 MAGEA5P43359 124 aa-2.21□□□□□ -2.76
RNU6-539P-201ENST00000516665 CDX1P47902 265 aaPredicted RBP-2.21□□□□□ -2.76
RNU6-539P-201ENST00000516665 NUMBP49757 651 aa-2.21□□□□□ -2.76
RNU6-539P-201ENST00000516665 SELENOTP62341 195 aa-2.21□□□□□ -2.76
RNU6-539P-201ENST00000516665 GFPT1Q06210 699 aaPredicted RBP-2.21□□□□□ -2.76
RNU6-539P-201ENST00000516665 KIAA0087Q14695 138 aa-2.21□□□□□ -2.76
RNU6-539P-201ENST00000516665 ZNF77Q15935 545 aa-2.21□□□□□ -2.76
RNU6-539P-201ENST00000516665 ZNF699Q32M78 642 aa-2.21□□□□□ -2.76
RNU6-539P-201ENST00000516665 LBHQ53QV2 105 aaPredicted RBP-2.21□□□□□ -2.76
RNU6-539P-201ENST00000516665 LGALS9CQ6DKI2 356 aa-2.21□□□□□ -2.76
RNU6-539P-201ENST00000516665 TMEM154Q6P9G4 183 aa-2.21□□□□□ -2.76
RNU6-539P-201ENST00000516665 CYP4V2Q6ZWL3 525 aaPredicted RBP-2.21□□□□□ -2.76
RNU6-539P-201ENST00000516665 TCF23Q7RTU1 214 aa-2.21□□□□□ -2.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms