RNA–Protein interactions for RNA: ENST00000516419.1

SNORA48.9-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 162 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.9-201ENST00000516419 TDO2P48775 406 aa4.27□□□□□ -1.73
SNORA48.9-201ENST00000516419 TTC23Q5W5X9 447 aa4.27□□□□□ -1.73
SNORA48.9-201ENST00000516419 GDPD3Q7L5L3 318 aa4.27□□□□□ -1.73
SNORA48.9-201ENST00000516419 ZNF683Q8IZ20 524 aa4.27□□□□□ -1.73
SNORA48.9-201ENST00000516419 DCAF4L2Q8NA75 395 aa4.27□□□□□ -1.73
SNORA48.9-201ENST00000516419 PELI1Q96FA3 418 aa4.27□□□□□ -1.73
SNORA48.9-201ENST00000516419 POLR2J2Q9GZM3 115 aaKnown RBP4.27□□□□□ -1.73
SNORA48.9-201ENST00000516419 POLR2J3Q9H1A7 115 aaKnown RBP4.27□□□□□ -1.73
SNORA48.9-201ENST00000516419 RMND5AQ9H871 391 aa4.27□□□□□ -1.73
SNORA48.9-201ENST00000516419 AATFQ9NY61 560 aaKnown RBP eCLIP4.27□□□□□ -1.73
SNORA48.9-201ENST00000516419 IL36GQ9NZH8 169 aa4.27□□□□□ -1.73
SNORA48.9-201ENST00000516419 CGNQ9P2M7 1197 aaKnown RBP4.27□□□□□ -1.73
SNORA48.9-201ENST00000516419 PCSK1NQ9UHG2 260 aa4.27□□□□□ -1.73
SNORA48.9-201ENST00000516419 SLCO1B1Q9Y6L6 691 aa4.27□□□□□ -1.73
SNORA48.9-201ENST00000516419 PSMB11A5LHX3 300 aa4.26□□□□□ -1.73
SNORA48.9-201ENST00000516419 PINLYPA6NC86 204 aa4.26□□□□□ -1.73
SNORA48.9-201ENST00000516419 ZNF780AO75290 641 aaPredicted RBP4.26□□□□□ -1.73
SNORA48.9-201ENST00000516419 LGALS2P05162 132 aa4.26□□□□□ -1.73
SNORA48.9-201ENST00000516419 UGT2B4P06133 528 aa4.26□□□□□ -1.73
SNORA48.9-201ENST00000516419 NR2C1P13056 603 aa4.26□□□□□ -1.73
SNORA48.9-201ENST00000516419 ZNF133P52736 654 aaPredicted RBP4.26□□□□□ -1.73
SNORA48.9-201ENST00000516419 NUP107P57740 925 aa4.26□□□□□ -1.73
SNORA48.9-201ENST00000516419 RIPK1Q13546 671 aa4.26□□□□□ -1.73
SNORA48.9-201ENST00000516419 DNAJC21Q5F1R6 531 aaKnown RBP4.26□□□□□ -1.73
SNORA48.9-201ENST00000516419 KLF17Q5JT82 389 aaPredicted RBP4.26□□□□□ -1.73
SNORA48.9-201ENST00000516419 BEND3Q5T5X7 828 aa4.26□□□□□ -1.73
SNORA48.9-201ENST00000516419 C1orf146Q5VVC0 180 aa4.26□□□□□ -1.73
SNORA48.9-201ENST00000516419 ANKFN1Q8N957 763 aa4.26□□□□□ -1.73
SNORA48.9-201ENST00000516419 ZNF740Q8NDX6 193 aa4.26□□□□□ -1.73
SNORA48.9-201ENST00000516419 OR4D5Q8NGN0 318 aa4.26□□□□□ -1.73
SNORA48.9-201ENST00000516419 HTR3CQ8WXA8 447 aa4.26□□□□□ -1.73
SNORA48.9-201ENST00000516419 RLN3Q8WXF3 142 aa4.26□□□□□ -1.73
SNORA48.9-201ENST00000516419 CHCHD10Q8WYQ3 142 aaPredicted RBP4.26□□□□□ -1.73
SNORA48.9-201ENST00000516419 TGM7Q96PF1 710 aa4.26□□□□□ -1.73
SNORA48.9-201ENST00000516419 MRPS33Q9Y291 106 aaKnown RBP4.26□□□□□ -1.73
SNORA48.9-201ENST00000516419 MRPS7Q9Y2R9 242 aaKnown RBP4.26□□□□□ -1.73
SNORA48.9-201ENST00000516419 TRDCB7Z8K6 153 aa4.25□□□□□ -1.73
SNORA48.9-201ENST00000516419 IGHG4P01861 327 aa4.25□□□□□ -1.73
SNORA48.9-201ENST00000516419 ALOX5P09917 674 aa4.25□□□□□ -1.73
SNORA48.9-201ENST00000516419 IMPDH1P20839 514 aa4.25□□□□□ -1.73
SNORA48.9-201ENST00000516419 MMP11P24347 488 aa4.25□□□□□ -1.73
SNORA48.9-201ENST00000516419 HTR1EP28566 365 aa4.25□□□□□ -1.73
SNORA48.9-201ENST00000516419 BIDP55957 195 aa4.25□□□□□ -1.73
SNORA48.9-201ENST00000516419 CAPRIN1Q14444 709 aaKnown RBP4.25□□□□□ -1.73
SNORA48.9-201ENST00000516419 GANABQ14697 944 aaKnown RBP4.25□□□□□ -1.73
SNORA48.9-201ENST00000516419 C10orf120Q5SQS8 335 aa4.25□□□□□ -1.73
SNORA48.9-201ENST00000516419 TPGS2Q68CL5 300 aa4.25□□□□□ -1.73
SNORA48.9-201ENST00000516419 TMEM225Q6GV28 225 aa4.25□□□□□ -1.73
SNORA48.9-201ENST00000516419 ZNF530Q6P9A1 599 aaPredicted RBP4.25□□□□□ -1.73
SNORA48.9-201ENST00000516419 NEIL3Q8TAT5 605 aa4.25□□□□□ -1.73
SNORA48.9-201ENST00000516419 TRMT10AQ8TBZ6 339 aaKnown RBP4.25□□□□□ -1.73
SNORA48.9-201ENST00000516419 ST8SIA1Q92185 356 aa4.25□□□□□ -1.73
SNORA48.9-201ENST00000516419 TBX15Q96SF7 602 aa4.25□□□□□ -1.73
SNORA48.9-201ENST00000516419 HES7Q9BYE0 225 aa4.25□□□□□ -1.73
SNORA48.9-201ENST00000516419 TREM2Q9NZC2 230 aa4.25□□□□□ -1.73
SNORA48.9-201ENST00000516419 SNX6Q9UNH7 406 aa4.25□□□□□ -1.73
SNORA48.9-201ENST00000516419 SH3TC1Q8TE82 1336 aa4.24□□□□□ -1.73
SNORA48.9-201ENST00000516419 CDC42BPBQ9Y5S2 1711 aa4.24□□□□□ -1.73
SNORA48.9-201ENST00000516419 A0A1B0GUS0 222 aa4.24□□□□□ -1.73
SNORA48.9-201ENST00000516419 LRP5LA4QPB2 252 aa4.24□□□□□ -1.73
SNORA48.9-201ENST00000516419 A8MUA0 341 aa4.24□□□□□ -1.73
SNORA48.9-201ENST00000516419 K7EQM0 130 aa4.24□□□□□ -1.73
SNORA48.9-201ENST00000516419 LGI1O95970 557 aa4.24□□□□□ -1.73
SNORA48.9-201ENST00000516419 IQCF3P0C7M6 154 aa4.24□□□□□ -1.73
SNORA48.9-201ENST00000516419 PNMTP11086 282 aa4.24□□□□□ -1.73
SNORA48.9-201ENST00000516419 COX5AP20674 150 aa4.24□□□□□ -1.73
SNORA48.9-201ENST00000516419 HNF1AP20823 631 aa4.24□□□□□ -1.73
SNORA48.9-201ENST00000516419 ARFRP1Q13795 201 aa4.24□□□□□ -1.73
SNORA48.9-201ENST00000516419 ZNF630Q2M218 657 aaPredicted RBP4.24□□□□□ -1.73
SNORA48.9-201ENST00000516419 C11orf71Q6IPW1 123 aa4.24□□□□□ -1.73
SNORA48.9-201ENST00000516419 CATSPER1Q8NEC5 780 aa4.24□□□□□ -1.73
SNORA48.9-201ENST00000516419 ZNF607Q96SK3 696 aa4.24□□□□□ -1.73
SNORA48.9-201ENST00000516419 HIST1H4GQ99525 98 aa4.24□□□□□ -1.73
SNORA48.9-201ENST00000516419 SELENOIQ9C0D9 397 aa4.24□□□□□ -1.73
SNORA48.9-201ENST00000516419 POLR1EQ9GZS1 481 aaKnown RBP4.24□□□□□ -1.73
SNORA48.9-201ENST00000516419 AIG1Q9NVV5 245 aa4.24□□□□□ -1.73
SNORA48.9-201ENST00000516419 PIPOXQ9P0Z9 390 aa4.24□□□□□ -1.73
SNORA48.9-201ENST00000516419 KIF25Q9UIL4 384 aa4.24□□□□□ -1.73
SNORA48.9-201ENST00000516419 DDX49Q9Y6V7 483 aaKnown RBP4.24□□□□□ -1.73
SNORA48.9-201ENST00000516419 LTBP1Q14766 1721 aa4.24□□□□□ -1.73
SNORA48.9-201ENST00000516419 A0A1W2PNU3 283 aaPredicted RBP4.23□□□□□ -1.73
SNORA48.9-201ENST00000516419 RBMY1CP0DJD4 496 aa4.23□□□□□ -1.73
SNORA48.9-201ENST00000516419 COX7A1P24310 79 aa4.23□□□□□ -1.73
SNORA48.9-201ENST00000516419 CCNE1P24864 410 aa4.23□□□□□ -1.73
SNORA48.9-201ENST00000516419 PTGDSP41222 190 aa4.23□□□□□ -1.73
SNORA48.9-201ENST00000516419 DAZ2Q13117 558 aaKnown RBP4.23□□□□□ -1.73
SNORA48.9-201ENST00000516419 NSDHLQ15738 373 aa4.23□□□□□ -1.73
SNORA48.9-201ENST00000516419 NSUN5P1Q3KNT7 163 aa4.23□□□□□ -1.73
SNORA48.9-201ENST00000516419 CCDC50Q8IVM0 306 aa4.23□□□□□ -1.73
SNORA48.9-201ENST00000516419 NKAPP1Q8N9T2 125 aa4.23□□□□□ -1.73
SNORA48.9-201ENST00000516419 C20orf203Q8NBC4 194 aa4.23□□□□□ -1.73
SNORA48.9-201ENST00000516419 GMCL1P1Q8NEA9 526 aa4.23□□□□□ -1.73
SNORA48.9-201ENST00000516419 UCN3Q969E3 161 aa4.23□□□□□ -1.73
SNORA48.9-201ENST00000516419 ZNF799Q96GE5 643 aa4.23□□□□□ -1.73
SNORA48.9-201ENST00000516419 SEC22AQ96IW7 307 aa4.23□□□□□ -1.73
SNORA48.9-201ENST00000516419 TTC25Q96NG3 672 aa4.23□□□□□ -1.73
SNORA48.9-201ENST00000516419 POPDC2Q9HBU9 364 aa4.23□□□□□ -1.73
SNORA48.9-201ENST00000516419 DAZ3Q9NR90 486 aaKnown RBP4.23□□□□□ -1.73
SNORA48.9-201ENST00000516419 BLOC1S6Q9UL45 172 aa4.23□□□□□ -1.73
SNORA48.9-201ENST00000516419 ASF1AQ9Y294 204 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms