RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 LRRC36Q1X8D7 754 aa2.45□□□□□ -2.02
LINC01088-211ENST00000515597 LDLRAP1Q5SW96 308 aa2.45□□□□□ -2.02
LINC01088-211ENST00000515597 SPATA46Q5T0L3 261 aa2.45□□□□□ -2.02
LINC01088-211ENST00000515597 RAB12Q6IQ22 244 aa2.45□□□□□ -2.02
LINC01088-211ENST00000515597 KRTAP5-7Q6L8G8 165 aa2.45□□□□□ -2.02
LINC01088-211ENST00000515597 Q6P435 159 aa2.45□□□□□ -2.02
LINC01088-211ENST00000515597 DNM1P46Q6ZS02 220 aa2.45□□□□□ -2.02
LINC01088-211ENST00000515597 RBM43Q6ZSC3 357 aaKnown RBP2.45□□□□□ -2.02
LINC01088-211ENST00000515597 ASCL5Q7RTU5 278 aa2.45□□□□□ -2.02
LINC01088-211ENST00000515597 PPP1R27Q86WC6 154 aa2.45□□□□□ -2.02
LINC01088-211ENST00000515597 SERPINA9Q86WD7 417 aa2.45□□□□□ -2.02
LINC01088-211ENST00000515597 ERI1Q8IV48 349 aaKnown RBP2.45□□□□□ -2.02
LINC01088-211ENST00000515597 EFCAB13Q8IY85 973 aa2.45□□□□□ -2.02
LINC01088-211ENST00000515597 ZNF100Q8IYN0 542 aa2.45□□□□□ -2.02
LINC01088-211ENST00000515597 HDDC3Q8N4P3 179 aa2.45□□□□□ -2.02
LINC01088-211ENST00000515597 CERS5Q8N5B7 392 aa2.45□□□□□ -2.02
LINC01088-211ENST00000515597 MINDY2Q8NBR6 621 aa2.45□□□□□ -2.02
LINC01088-211ENST00000515597 BBS1Q8NFJ9 593 aa2.45□□□□□ -2.02
LINC01088-211ENST00000515597 OR9A4Q8NGU2 314 aa2.45□□□□□ -2.02
LINC01088-211ENST00000515597 TRUB1Q8WWH5 349 aaKnown RBP2.45□□□□□ -2.02
LINC01088-211ENST00000515597 SAMD8Q96LT4 415 aa2.45□□□□□ -2.02
LINC01088-211ENST00000515597 SLC25A51Q9H1U9 297 aa2.45□□□□□ -2.02
LINC01088-211ENST00000515597 SPRR3Q9UBC9 169 aa2.45□□□□□ -2.02
LINC01088-211ENST00000515597 KIF24Q5T7B8 1368 aa2.45□□□□□ -2.02
LINC01088-211ENST00000515597 LTBP2Q14767 1821 aa2.45□□□□□ -2.02
LINC01088-211ENST00000515597 ABCC4O15439 1325 aa2.44□□□□□ -2.02
LINC01088-211ENST00000515597 CDHR2Q9BYE9 1310 aa2.44□□□□□ -2.02
LINC01088-211ENST00000515597 DMDP11532 3685 aa2.44□□□□□ -2.02
LINC01088-211ENST00000515597 IGHV7-81A0A0B4J1V7 117 aa2.44□□□□□ -2.02
LINC01088-211ENST00000515597 FAM230AA0A1W2PPH8 454 aa2.44□□□□□ -2.02
LINC01088-211ENST00000515597 RNF222A6NCQ9 220 aa2.44□□□□□ -2.02
LINC01088-211ENST00000515597 LRRC30A6NM36 301 aa2.44□□□□□ -2.02
LINC01088-211ENST00000515597 ANKRD30BLA7E2S9 258 aa2.44□□□□□ -2.02
LINC01088-211ENST00000515597 RSPH10B2B2RC85 870 aa2.44□□□□□ -2.02
LINC01088-211ENST00000515597 TOM1L1O75674 476 aa2.44□□□□□ -2.02
LINC01088-211ENST00000515597 MMP23AO75900 390 aa2.44□□□□□ -2.02
LINC01088-211ENST00000515597 TGFAP01135 160 aa2.44□□□□□ -2.02
LINC01088-211ENST00000515597 CHRNA1P02708 482 aa2.44□□□□□ -2.02
LINC01088-211ENST00000515597 RSPH10BP0C881 870 aa2.44□□□□□ -2.02
LINC01088-211ENST00000515597 ZNF853P0CG23 659 aa2.44□□□□□ -2.02
LINC01088-211ENST00000515597 ARF4P18085 180 aaPredicted RBP2.44□□□□□ -2.02
LINC01088-211ENST00000515597 VDAC1P21796 283 aa2.44□□□□□ -2.02
LINC01088-211ENST00000515597 HOXD10P28358 340 aa2.44□□□□□ -2.02
LINC01088-211ENST00000515597 AXLP30530 894 aa2.44□□□□□ -2.02
LINC01088-211ENST00000515597 NOVA1P51513 510 aaKnown RBP2.44□□□□□ -2.02
LINC01088-211ENST00000515597 ATXN3P54252 364 aaPredicted RBP2.44□□□□□ -2.02
LINC01088-211ENST00000515597 NAPAP54920 295 aa2.44□□□□□ -2.02
LINC01088-211ENST00000515597 MRPS11P82912 194 aaKnown RBP2.44□□□□□ -2.02
LINC01088-211ENST00000515597 MECOMQ03112 1051 aa2.44□□□□□ -2.02
LINC01088-211ENST00000515597 ZNF658BQ4V348 819 aaPredicted RBP2.44□□□□□ -2.02
LINC01088-211ENST00000515597 CXCL17Q6UXB2 119 aa2.44□□□□□ -2.02
LINC01088-211ENST00000515597 NBPF5PQ86XG9 351 aaPredicted RBP2.44□□□□□ -2.02
LINC01088-211ENST00000515597 ENTHD1Q8IYW4 607 aa2.44□□□□□ -2.02
LINC01088-211ENST00000515597 MRPL43Q8N983 215 aaKnown RBP2.44□□□□□ -2.02
LINC01088-211ENST00000515597 Q8N9L7 120 aa2.44□□□□□ -2.02
LINC01088-211ENST00000515597 ZBTB44Q8NCP5 570 aa2.44□□□□□ -2.02
LINC01088-211ENST00000515597 OR9A1PQ8NGU1 263 aa2.44□□□□□ -2.02
LINC01088-211ENST00000515597 ZBED3Q96IU2 234 aaPredicted RBP2.44□□□□□ -2.02
LINC01088-211ENST00000515597 VSTM2LQ96N03 204 aa2.44□□□□□ -2.02
LINC01088-211ENST00000515597 TMEM237Q96Q45 408 aa2.44□□□□□ -2.02
LINC01088-211ENST00000515597 SLC30A2Q9BRI3 323 aa2.44□□□□□ -2.02
LINC01088-211ENST00000515597 TBCDQ9BTW9 1192 aa2.44□□□□□ -2.02
LINC01088-211ENST00000515597 CCSER1Q9C0I3 900 aa2.44□□□□□ -2.02
LINC01088-211ENST00000515597 POLR3FQ9H1D9 316 aaPredicted RBP2.44□□□□□ -2.02
LINC01088-211ENST00000515597 CAB39LQ9H9S4 337 aa2.44□□□□□ -2.02
LINC01088-211ENST00000515597 GPN2Q9H9Y4 310 aaPredicted RBP2.44□□□□□ -2.02
LINC01088-211ENST00000515597 YAE1D1Q9NRH1 226 aa2.44□□□□□ -2.02
LINC01088-211ENST00000515597 RDH8Q9NYR8 311 aa2.44□□□□□ -2.02
LINC01088-211ENST00000515597 OR1A1Q9P1Q5 309 aa2.44□□□□□ -2.02
LINC01088-211ENST00000515597 ANKMY1Q9P2S6 941 aa2.44□□□□□ -2.02
LINC01088-211ENST00000515597 RNF6Q9Y252 685 aa2.44□□□□□ -2.02
LINC01088-211ENST00000515597 ATP6V0A2Q9Y487 856 aa2.44□□□□□ -2.02
LINC01088-211ENST00000515597 USP16Q9Y5T5 823 aa2.44□□□□□ -2.02
LINC01088-211ENST00000515597 AP4B1Q9Y6B7 739 aa2.44□□□□□ -2.02
LINC01088-211ENST00000515597 DDX60LQ5H9U9 1706 aaKnown RBP2.44□□□□□ -2.02
LINC01088-211ENST00000515597 FASNP49327 2511 aaKnown RBP2.44□□□□□ -2.02
LINC01088-211ENST00000515597 CEMIPQ8WUJ3 1361 aa2.44□□□□□ -2.02
LINC01088-211ENST00000515597 MYO15AQ9UKN7 3530 aa2.44□□□□□ -2.02
LINC01088-211ENST00000515597 UBN2Q6ZU65 1347 aa2.43□□□□□ -2.02
LINC01088-211ENST00000515597 EVC2Q86UK5 1308 aa2.43□□□□□ -2.02
LINC01088-211ENST00000515597 CHD7Q9P2D1 2997 aa2.43□□□□□ -2.02
LINC01088-211ENST00000515597 EDC4Q6P2E9 1401 aaKnown RBP2.43□□□□□ -2.02
LINC01088-211ENST00000515597 GPR179Q6PRD1 2367 aa2.43□□□□□ -2.02
LINC01088-211ENST00000515597 ZFHX2Q9C0A1 2572 aaPredicted RBP2.43□□□□□ -2.02
LINC01088-211ENST00000515597 K7ENP7 123 aa2.43□□□□□ -2.02
LINC01088-211ENST00000515597 SEC22BO75396 215 aa2.43□□□□□ -2.02
LINC01088-211ENST00000515597 GPX5O75715 221 aa2.43□□□□□ -2.02
LINC01088-211ENST00000515597 BBOX1O75936 387 aa2.43□□□□□ -2.02
LINC01088-211ENST00000515597 ASNSP08243 561 aa2.43□□□□□ -2.02
LINC01088-211ENST00000515597 HBQ1P09105 142 aa2.43□□□□□ -2.02
LINC01088-211ENST00000515597 THRBP10828 461 aa2.43□□□□□ -2.02
LINC01088-211ENST00000515597 DPP4P27487 766 aa2.43□□□□□ -2.02
LINC01088-211ENST00000515597 GCKP35557 465 aa2.43□□□□□ -2.02
LINC01088-211ENST00000515597 GPC3P51654 580 aa2.43□□□□□ -2.02
LINC01088-211ENST00000515597 TIMM10P62072 90 aa2.43□□□□□ -2.02
LINC01088-211ENST00000515597 NTHL1P78549 312 aa2.43□□□□□ -2.02
LINC01088-211ENST00000515597 DPYSL3Q14195 570 aa2.43□□□□□ -2.02
LINC01088-211ENST00000515597 IL17AQ16552 155 aa2.43□□□□□ -2.02
LINC01088-211ENST00000515597 CCDC14Q49A88 953 aa2.43□□□□□ -2.02
LINC01088-211ENST00000515597 CFAP221Q4G0U5 840 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms