RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 RIPK1Q13546 671 aa10.82□□□□□ -0.68
PDLIM5-220ENST00000514830 ATP6AP1Q15904 470 aa10.82□□□□□ -0.68
PDLIM5-220ENST00000514830 COLEC12Q5KU26 742 aa10.82□□□□□ -0.68
PDLIM5-220ENST00000514830 C3orf33Q6P1S2 294 aa10.82□□□□□ -0.68
PDLIM5-220ENST00000514830 TRILQ7L0X0 811 aa10.82□□□□□ -0.68
PDLIM5-220ENST00000514830 RNF113BQ8IZP6 322 aaKnown RBP10.82□□□□□ -0.68
PDLIM5-220ENST00000514830 CADM2Q8N3J6 435 aa10.82□□□□□ -0.68
PDLIM5-220ENST00000514830 LINC00471Q8N535 108 aa10.82□□□□□ -0.68
PDLIM5-220ENST00000514830 OR6S1Q8NH40 331 aa10.82□□□□□ -0.68
PDLIM5-220ENST00000514830 STK35Q8TDR2 534 aa10.82□□□□□ -0.68
PDLIM5-220ENST00000514830 FAR1Q8WVX9 515 aa10.82□□□□□ -0.68
PDLIM5-220ENST00000514830 PYDC1Q8WXC3 89 aa10.82□□□□□ -0.68
PDLIM5-220ENST00000514830 STMN2Q93045 179 aa10.82□□□□□ -0.68
PDLIM5-220ENST00000514830 EPYCQ99645 322 aa10.82□□□□□ -0.68
PDLIM5-220ENST00000514830 SLX1AQ9BQ83 275 aa10.82□□□□□ -0.68
PDLIM5-220ENST00000514830 FNDC11Q9BVV2 318 aa10.82□□□□□ -0.68
PDLIM5-220ENST00000514830 CTPS2Q9NRF8 586 aa10.82□□□□□ -0.68
PDLIM5-220ENST00000514830 SERINC1Q9NRX5 453 aa10.82□□□□□ -0.68
PDLIM5-220ENST00000514830 SELENONQ9NZV5 590 aa10.82□□□□□ -0.68
PDLIM5-220ENST00000514830 STOML1Q9UBI4 398 aa10.82□□□□□ -0.68
PDLIM5-220ENST00000514830 CHRNA9Q9UGM1 479 aa10.82□□□□□ -0.68
PDLIM5-220ENST00000514830 SLC7A7Q9UM01 511 aa10.82□□□□□ -0.68
PDLIM5-220ENST00000514830 TMED7Q9Y3B3 224 aa10.82□□□□□ -0.68
PDLIM5-220ENST00000514830 SPIN1Q9Y657 262 aaPredicted RBP10.82□□□□□ -0.68
PDLIM5-220ENST00000514830 HECTD1Q9ULT8 2610 aa10.82□□□□□ -0.68
PDLIM5-220ENST00000514830 TENM4Q6N022 2769 aa10.82□□□□□ -0.68
PDLIM5-220ENST00000514830 TRGV5A0A0B4J1U4 118 aa10.81□□□□□ -0.68
PDLIM5-220ENST00000514830 OR14I1A6ND48 311 aa10.81□□□□□ -0.68
PDLIM5-220ENST00000514830 ELOA3DA6NLF2 546 aaPredicted RBP10.81□□□□□ -0.68
PDLIM5-220ENST00000514830 A8MVM7 634 aa10.81□□□□□ -0.68
PDLIM5-220ENST00000514830 AQP7O14520 342 aa10.81□□□□□ -0.68
PDLIM5-220ENST00000514830 GMFGO60234 142 aa10.81□□□□□ -0.68
PDLIM5-220ENST00000514830 GADD45GO95257 159 aa10.81□□□□□ -0.68
PDLIM5-220ENST00000514830 CELA3AP09093 270 aa10.81□□□□□ -0.68
PDLIM5-220ENST00000514830 CPN1P15169 458 aa10.81□□□□□ -0.68
PDLIM5-220ENST00000514830 CXCR1P25024 350 aa10.81□□□□□ -0.68
PDLIM5-220ENST00000514830 FASP25445 335 aa10.81□□□□□ -0.68
PDLIM5-220ENST00000514830 GCKP35557 465 aa10.81□□□□□ -0.68
PDLIM5-220ENST00000514830 TDGF1P3P51864 188 aa10.81□□□□□ -0.68
PDLIM5-220ENST00000514830 ELOA3BQ3SY89 546 aa10.81□□□□□ -0.68
PDLIM5-220ENST00000514830 WIPI1Q5MNZ9 446 aaPredicted RBP10.81□□□□□ -0.68
PDLIM5-220ENST00000514830 RAET1LQ5VY80 246 aa10.81□□□□□ -0.68
PDLIM5-220ENST00000514830 VASNQ6EMK4 673 aa10.81□□□□□ -0.68
PDLIM5-220ENST00000514830 YRDCQ86U90 279 aaKnown RBP10.81□□□□□ -0.68
PDLIM5-220ENST00000514830 ELOA3Q8NG57 546 aa10.81□□□□□ -0.68
PDLIM5-220ENST00000514830 OR4C15Q8NGM1 316 aa10.81□□□□□ -0.68
PDLIM5-220ENST00000514830 ACOT11Q8WXI4 607 aaPredicted RBP10.81□□□□□ -0.68
PDLIM5-220ENST00000514830 NRBF2Q96F24 287 aa10.81□□□□□ -0.68
PDLIM5-220ENST00000514830 GPR137Q96N19 417 aa10.81□□□□□ -0.68
PDLIM5-220ENST00000514830 SFXN2Q96NB2 322 aa10.81□□□□□ -0.68
PDLIM5-220ENST00000514830 NPAS1Q99742 590 aa10.81□□□□□ -0.68
PDLIM5-220ENST00000514830 PSD2Q9BQI7 771 aa10.81□□□□□ -0.68
PDLIM5-220ENST00000514830 POTEKPQ9BYX7 375 aa10.81□□□□□ -0.68
PDLIM5-220ENST00000514830 DCLRE1BQ9H816 532 aa10.81□□□□□ -0.68
PDLIM5-220ENST00000514830 NTN4Q9HB63 628 aa10.81□□□□□ -0.68
PDLIM5-220ENST00000514830 LYVE1Q9Y5Y7 322 aa10.81□□□□□ -0.68
PDLIM5-220ENST00000514830 SHANK1Q9Y566 2161 aa10.81□□□□□ -0.68
PDLIM5-220ENST00000514830 GTF3C1Q12789 2109 aa10.81□□□□□ -0.68
PDLIM5-220ENST00000514830 ARRDC5A6NEK1 342 aa10.8□□□□□ -0.68
PDLIM5-220ENST00000514830 GJE1A6NN92 205 aa10.8□□□□□ -0.68
PDLIM5-220ENST00000514830 MGRN1O60291 552 aa10.8□□□□□ -0.68
PDLIM5-220ENST00000514830 TIPRLO75663 272 aa10.8□□□□□ -0.68
PDLIM5-220ENST00000514830 DIRAS1O95057 198 aa10.8□□□□□ -0.68
PDLIM5-220ENST00000514830 LDLRP01130 860 aa10.8□□□□□ -0.68
PDLIM5-220ENST00000514830 MT-ND1P03886 318 aa10.8□□□□□ -0.68
PDLIM5-220ENST00000514830 PEPDP12955 493 aa10.8□□□□□ -0.68
PDLIM5-220ENST00000514830 ZNF708P17019 499 aa10.8□□□□□ -0.68
PDLIM5-220ENST00000514830 RRM2P31350 389 aa10.8□□□□□ -0.68
PDLIM5-220ENST00000514830 YAP1P46937 504 aaKnown RBP10.8□□□□□ -0.68
PDLIM5-220ENST00000514830 LHX2P50458 406 aa10.8□□□□□ -0.68
PDLIM5-220ENST00000514830 ERFP50548 548 aa10.8□□□□□ -0.68
PDLIM5-220ENST00000514830 CTBP2P56545 445 aa10.8□□□□□ -0.68
PDLIM5-220ENST00000514830 FOXK1P85037 733 aa10.8□□□□□ -0.68
PDLIM5-220ENST00000514830 EGR4Q05215 589 aa10.8□□□□□ -0.68
PDLIM5-220ENST00000514830 CRYZQ08257 329 aaKnown RBP10.8□□□□□ -0.68
PDLIM5-220ENST00000514830 TOMM20Q15388 145 aa10.8□□□□□ -0.68
PDLIM5-220ENST00000514830 ARHGAP11AQ6P4F7 1023 aa10.8□□□□□ -0.68
PDLIM5-220ENST00000514830 WDR88Q6ZMY6 472 aa10.8□□□□□ -0.68
PDLIM5-220ENST00000514830 NKAIN4Q8IVV8 208 aa10.8□□□□□ -0.68
PDLIM5-220ENST00000514830 SLC7A13Q8TCU3 470 aa10.8□□□□□ -0.68
PDLIM5-220ENST00000514830 TMEM239Q8WW34 195 aa10.8□□□□□ -0.68
PDLIM5-220ENST00000514830 DDIT4LQ96D03 193 aa10.8□□□□□ -0.68
PDLIM5-220ENST00000514830 SNRNP40Q96DI7 357 aaKnown RBP10.8□□□□□ -0.68
PDLIM5-220ENST00000514830 CENPNQ96H22 339 aaPredicted RBP10.8□□□□□ -0.68
PDLIM5-220ENST00000514830 BDH2Q9BUT1 245 aa10.8□□□□□ -0.68
PDLIM5-220ENST00000514830 SLC6A15Q9H2J7 730 aa10.8□□□□□ -0.68
PDLIM5-220ENST00000514830 REEP1Q9H902 201 aa10.8□□□□□ -0.68
PDLIM5-220ENST00000514830 C6orf203Q9P0P8 240 aaPredicted RBP10.8□□□□□ -0.68
PDLIM5-220ENST00000514830 TRAPPC4Q9Y296 219 aa10.8□□□□□ -0.68
PDLIM5-220ENST00000514830 RRP15Q9Y3B9 282 aaKnown RBP10.8□□□□□ -0.68
PDLIM5-220ENST00000514830 HDGFL3Q9Y3E1 203 aa10.8□□□□□ -0.68
PDLIM5-220ENST00000514830 ZNF337Q9Y3M9 751 aa10.8□□□□□ -0.68
PDLIM5-220ENST00000514830 TESMINQ9Y4I5 508 aa10.8□□□□□ -0.68
PDLIM5-220ENST00000514830 MED12Q93074 2177 aa10.8□□□□□ -0.68
PDLIM5-220ENST00000514830 IGKV1D-42A0A075B6H8 117 aa10.79□□□□□ -0.68
PDLIM5-220ENST00000514830 A0A087WUU8 490 aa10.79□□□□□ -0.68
PDLIM5-220ENST00000514830 TMEM72A0PK05 275 aa10.79□□□□□ -0.68
PDLIM5-220ENST00000514830 SH3PXD2BA1X283 911 aa10.79□□□□□ -0.68
PDLIM5-220ENST00000514830 SHISA8B8ZZ34 492 aa10.79□□□□□ -0.68
PDLIM5-220ENST00000514830 H0YHG0 523 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms