RNA–Protein interactions for RNA: ENST00000514537.5

CLDND1-230, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 1,013 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-230ENST00000514537 ACTR6Q9GZN1 396 aa20.47■□□□□ 0.87
CLDND1-230ENST00000514537 ZNF469Q96JG9 3925 aaPredicted RBP20.47■□□□□ 0.87
CLDND1-230ENST00000514537 CDHR4A6H8M9 788 aa20.46■□□□□ 0.87
CLDND1-230ENST00000514537 CFAP73A6NFT4 308 aa20.46■□□□□ 0.87
CLDND1-230ENST00000514537 ZNF724A8MTY0 619 aa20.46■□□□□ 0.87
CLDND1-230ENST00000514537 ZNF814B7Z6K7 855 aa20.46■□□□□ 0.87
CLDND1-230ENST00000514537 KLF4O43474 513 aa20.46■□□□□ 0.87
CLDND1-230ENST00000514537 PMS2P2O95744 297 aa20.46■□□□□ 0.87
CLDND1-230ENST00000514537 BCHEP06276 602 aa20.46■□□□□ 0.87
CLDND1-230ENST00000514537 FESP07332 822 aa20.46■□□□□ 0.87
CLDND1-230ENST00000514537 SLC1A3P43003 542 aa20.46■□□□□ 0.87
CLDND1-230ENST00000514537 RGNQ15493 299 aa20.46■□□□□ 0.87
CLDND1-230ENST00000514537 LIN52Q52LA3 116 aa20.46■□□□□ 0.87
CLDND1-230ENST00000514537 VRK2Q86Y07 508 aa20.46■□□□□ 0.87
CLDND1-230ENST00000514537 TGIF2LYQ8IUE0 185 aa20.46■□□□□ 0.87
CLDND1-230ENST00000514537 STEAP2Q8NFT2 490 aa20.46■□□□□ 0.87
CLDND1-230ENST00000514537 CKAP2Q8WWK9 683 aa20.46■□□□□ 0.87
CLDND1-230ENST00000514537 HS3ST6Q96QI5 342 aa20.46■□□□□ 0.87
CLDND1-230ENST00000514537 ZNF300Q96RE9 604 aaPredicted RBP20.46■□□□□ 0.87
CLDND1-230ENST00000514537 TMUB1Q9BVT8 246 aa20.46■□□□□ 0.87
CLDND1-230ENST00000514537 OR11A1Q9GZK7 315 aa20.46■□□□□ 0.87
CLDND1-230ENST00000514537 SLC52A3Q9NQ40 469 aa20.46■□□□□ 0.87
CLDND1-230ENST00000514537 RLIMQ9NVW2 624 aa20.46■□□□□ 0.87
CLDND1-230ENST00000514537 OSGIN1Q9UJX0 560 aa20.46■□□□□ 0.87
CLDND1-230ENST00000514537 PRDM4Q9UKN5 801 aa20.46■□□□□ 0.87
CLDND1-230ENST00000514537 A0A096LPI6 279 aa20.45■□□□□ 0.86
CLDND1-230ENST00000514537 TMED7-TICAM2A0A0A6YYA0 188 aa20.45■□□□□ 0.86
CLDND1-230ENST00000514537 A0A0G2JPF8 293 aa20.45■□□□□ 0.86
CLDND1-230ENST00000514537 HNRNPCL2B2RXH8 293 aa20.45■□□□□ 0.86
CLDND1-230ENST00000514537 HNRNPCL3B7ZW38 293 aa20.45■□□□□ 0.86
CLDND1-230ENST00000514537 CLIC1O00299 241 aa20.45■□□□□ 0.86
CLDND1-230ENST00000514537 HNRNPCL1O60812 293 aaKnown RBP20.45■□□□□ 0.86
CLDND1-230ENST00000514537 HNRNPCL4P0DMR1 293 aa20.45■□□□□ 0.86
CLDND1-230ENST00000514537 TACR3P29371 465 aa20.45■□□□□ 0.86
CLDND1-230ENST00000514537 OR3A2P47893 321 aa20.45■□□□□ 0.86
CLDND1-230ENST00000514537 POLR2HP52434 150 aaKnown RBP20.45■□□□□ 0.86
CLDND1-230ENST00000514537 PDK3Q15120 406 aa20.45■□□□□ 0.86
CLDND1-230ENST00000514537 BEX5Q5H9J7 111 aa20.45■□□□□ 0.86
CLDND1-230ENST00000514537 SFRP5Q5T4F7 317 aa20.45■□□□□ 0.86
CLDND1-230ENST00000514537 ABLIM2Q6H8Q1 611 aa20.45■□□□□ 0.86
CLDND1-230ENST00000514537 ZNF836Q6ZNA1 936 aa20.45■□□□□ 0.86
CLDND1-230ENST00000514537 ZNF440Q8IYI8 595 aa20.45■□□□□ 0.86
CLDND1-230ENST00000514537 ZNF775Q96BV0 537 aaPredicted RBP20.45■□□□□ 0.86
CLDND1-230ENST00000514537 TMEM19Q96HH6 336 aa20.45■□□□□ 0.86
CLDND1-230ENST00000514537 RAD21L1Q9H4I0 556 aa20.45■□□□□ 0.86
CLDND1-230ENST00000514537 TMEM45AQ9NWC5 275 aa20.45■□□□□ 0.86
CLDND1-230ENST00000514537 TRAPPC4Q9Y296 219 aa20.45■□□□□ 0.86
CLDND1-230ENST00000514537 TMED7Q9Y3B3 224 aa20.45■□□□□ 0.86
CLDND1-230ENST00000514537 VPS13CQ709C8 3753 aa20.44■□□□□ 0.86
CLDND1-230ENST00000514537 ZNF208O43345 1280 aa20.44■□□□□ 0.86
CLDND1-230ENST00000514537 DNPH1O43598 174 aa20.44■□□□□ 0.86
CLDND1-230ENST00000514537 ADAP00813 363 aa20.44■□□□□ 0.86
CLDND1-230ENST00000514537 NUDT7P0C024 238 aa20.44■□□□□ 0.86
CLDND1-230ENST00000514537 BMP2P12643 396 aa20.44■□□□□ 0.86
CLDND1-230ENST00000514537 UQCRBP14927 111 aa20.44■□□□□ 0.86
CLDND1-230ENST00000514537 CCNA2P20248 432 aa20.44■□□□□ 0.86
CLDND1-230ENST00000514537 MAP2K6P52564 334 aa20.44■□□□□ 0.86
CLDND1-230ENST00000514537 P2RY6Q15077 328 aa20.44■□□□□ 0.86
CLDND1-230ENST00000514537 RPS26P11Q5JNZ5 115 aaPredicted RBP20.44■□□□□ 0.86
CLDND1-230ENST00000514537 LRIF1Q5T3J3 769 aa20.44■□□□□ 0.86
CLDND1-230ENST00000514537 S100PBPQ96BU1 408 aa20.44■□□□□ 0.86
CLDND1-230ENST00000514537 SPDL1Q96EA4 605 aa20.44■□□□□ 0.86
CLDND1-230ENST00000514537 MAGEB18Q96M61 343 aa20.44■□□□□ 0.86
CLDND1-230ENST00000514537 ADAM19Q9H013 955 aa20.44■□□□□ 0.86
CLDND1-230ENST00000514537 BEX4Q9NWD9 120 aaPredicted RBP20.44■□□□□ 0.86
CLDND1-230ENST00000514537 SLC25A37Q9NYZ2 338 aa20.44■□□□□ 0.86
CLDND1-230ENST00000514537 CCDC167Q9P0B6 97 aa20.44■□□□□ 0.86
CLDND1-230ENST00000514537 IGKV3D-15A0A087WSY6 115 aa20.43■□□□□ 0.86
CLDND1-230ENST00000514537 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP20.43■□□□□ 0.86
CLDND1-230ENST00000514537 TMEM72A0PK05 275 aa20.43■□□□□ 0.86
CLDND1-230ENST00000514537 TMEM247A6NEH6 219 aa20.43■□□□□ 0.86
CLDND1-230ENST00000514537 THBS1P07996 1170 aa20.43■□□□□ 0.86
CLDND1-230ENST00000514537 GKN3PP0CG01 181 aa20.43■□□□□ 0.86
CLDND1-230ENST00000514537 ACAA2P42765 397 aaKnown RBP20.43■□□□□ 0.86
CLDND1-230ENST00000514537 ATP4BP51164 291 aa20.43■□□□□ 0.86
CLDND1-230ENST00000514537 IRX1P78414 480 aaPredicted RBP20.43■□□□□ 0.86
CLDND1-230ENST00000514537 FADDQ13158 208 aa20.43■□□□□ 0.86
CLDND1-230ENST00000514537 ITGADQ13349 1161 aa20.43■□□□□ 0.86
CLDND1-230ENST00000514537 TSC22D1Q15714 1073 aa20.43■□□□□ 0.86
CLDND1-230ENST00000514537 ACKR1Q16570 336 aa20.43■□□□□ 0.86
CLDND1-230ENST00000514537 ZSWIM7Q19AV6 140 aa20.43■□□□□ 0.86
CLDND1-230ENST00000514537 RNF220Q5VTB9 566 aa20.43■□□□□ 0.86
CLDND1-230ENST00000514537 GALNT5Q7Z7M9 940 aa20.43■□□□□ 0.86
CLDND1-230ENST00000514537 MSRB3Q8IXL7 192 aa20.43■□□□□ 0.86
CLDND1-230ENST00000514537 STON2Q8WXE9 905 aa20.43■□□□□ 0.86
CLDND1-230ENST00000514537 ZHX1-C8orf76Q96EF9 292 aa20.43■□□□□ 0.86
CLDND1-230ENST00000514537 BCL2L10Q9HD36 194 aa20.43■□□□□ 0.86
CLDND1-230ENST00000514537 A4GALTQ9NPC4 353 aa20.43■□□□□ 0.86
CLDND1-230ENST00000514537 SLAMF8Q9P0V8 285 aa20.43■□□□□ 0.86
CLDND1-230ENST00000514537 TMEM181Q9P2C4 612 aa20.43■□□□□ 0.86
CLDND1-230ENST00000514537 ZNF443Q9Y2A4 671 aaPredicted RBP20.43■□□□□ 0.86
CLDND1-230ENST00000514537 CHST2Q9Y4C5 530 aa20.43■□□□□ 0.86
CLDND1-230ENST00000514537 FREM1Q5H8C1 2179 aa20.43■□□□□ 0.86
CLDND1-230ENST00000514537 ROS1P08922 2347 aa20.43■□□□□ 0.86
CLDND1-230ENST00000514537 ZNF716A6NP11 495 aa20.42■□□□□ 0.86
CLDND1-230ENST00000514537 NR5A2O00482 541 aa20.42■□□□□ 0.86
CLDND1-230ENST00000514537 CD99P14209 185 aa20.42■□□□□ 0.86
CLDND1-230ENST00000514537 EDNRAP25101 427 aa20.42■□□□□ 0.86
CLDND1-230ENST00000514537 ADAM8P78325 824 aa20.42■□□□□ 0.86
CLDND1-230ENST00000514537 H3F3AP84243 136 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms