RNA–Protein interactions for RNA: ENST00000514434.1

DDR1-275, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 514 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-275ENST00000514434 CYTIPO60759 359 aa11.6□□□□□ -0.55
DDR1-275ENST00000514434 ADAP00813 363 aa11.6□□□□□ -0.55
DDR1-275ENST00000514434 PPP3CBP16298 524 aa11.6□□□□□ -0.55
DDR1-275ENST00000514434 CD53P19397 219 aa11.6□□□□□ -0.55
DDR1-275ENST00000514434 RPS4Y1P22090 263 aaKnown RBP11.6□□□□□ -0.55
DDR1-275ENST00000514434 IL32P24001 234 aa11.6□□□□□ -0.55
DDR1-275ENST00000514434 CRISP3P54108 245 aa11.6□□□□□ -0.55
DDR1-275ENST00000514434 AGKQ53H12 422 aa11.6□□□□□ -0.55
DDR1-275ENST00000514434 ZNF836Q6ZNA1 936 aa11.6□□□□□ -0.55
DDR1-275ENST00000514434 FUNDC1Q8IVP5 155 aa11.6□□□□□ -0.55
DDR1-275ENST00000514434 CADM2Q8N3J6 435 aa11.6□□□□□ -0.55
DDR1-275ENST00000514434 MAL2Q969L2 176 aa11.6□□□□□ -0.55
DDR1-275ENST00000514434 SPDL1Q96EA4 605 aa11.6□□□□□ -0.55
DDR1-275ENST00000514434 ZHX1-C8orf76Q96EF9 292 aa11.6□□□□□ -0.55
DDR1-275ENST00000514434 PSD2Q9BQI7 771 aa11.6□□□□□ -0.55
DDR1-275ENST00000514434 CCDC28BQ9BUN5 200 aa11.6□□□□□ -0.55
DDR1-275ENST00000514434 PAIP1Q9H074 479 aaKnown RBP11.6□□□□□ -0.55
DDR1-275ENST00000514434 CXXC4Q9H2H0 198 aa11.6□□□□□ -0.55
DDR1-275ENST00000514434 CACYBPQ9HB71 228 aaKnown RBP11.6□□□□□ -0.55
DDR1-275ENST00000514434 OSGIN1Q9UJX0 560 aa11.6□□□□□ -0.55
DDR1-275ENST00000514434 GPR52Q9Y2T5 361 aa11.6□□□□□ -0.55
DDR1-275ENST00000514434 TMED7Q9Y3B3 224 aa11.6□□□□□ -0.55
DDR1-275ENST00000514434 CADP27708 2225 aa11.59□□□□□ -0.55
DDR1-275ENST00000514434 DSCAMO60469 2012 aa11.59□□□□□ -0.55
DDR1-275ENST00000514434 SETD2Q9BYW2 2564 aaPredicted RBP11.59□□□□□ -0.55
DDR1-275ENST00000514434 A0A096LPI6 279 aa11.59□□□□□ -0.55
DDR1-275ENST00000514434 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.59□□□□□ -0.55
DDR1-275ENST00000514434 CDHR4A6H8M9 788 aa11.59□□□□□ -0.55
DDR1-275ENST00000514434 ZNF814B7Z6K7 855 aa11.59□□□□□ -0.55
DDR1-275ENST00000514434 GCM2O75603 506 aaPredicted RBP11.59□□□□□ -0.55
DDR1-275ENST00000514434 IGHV3-9P01782 118 aa11.59□□□□□ -0.55
DDR1-275ENST00000514434 CD99P14209 185 aa11.59□□□□□ -0.55
DDR1-275ENST00000514434 UQCRBP14927 111 aa11.59□□□□□ -0.55
DDR1-275ENST00000514434 H2AFXP16104 143 aaPredicted RBP11.59□□□□□ -0.55
DDR1-275ENST00000514434 EDNRAP25101 427 aa11.59□□□□□ -0.55
DDR1-275ENST00000514434 MAGEA8P43361 318 aa11.59□□□□□ -0.55
DDR1-275ENST00000514434 HTR3AP46098 478 aa11.59□□□□□ -0.55
DDR1-275ENST00000514434 POLR2HP52434 150 aaKnown RBP11.59□□□□□ -0.55
DDR1-275ENST00000514434 EPS8Q12929 822 aa11.59□□□□□ -0.55
DDR1-275ENST00000514434 CAPRIN1Q14444 709 aaKnown RBP11.59□□□□□ -0.55
DDR1-275ENST00000514434 LARS2Q15031 903 aaKnown RBP11.59□□□□□ -0.55
DDR1-275ENST00000514434 RGNQ15493 299 aa11.59□□□□□ -0.55
DDR1-275ENST00000514434 LIN52Q52LA3 116 aa11.59□□□□□ -0.55
DDR1-275ENST00000514434 BEX5Q5H9J7 111 aa11.59□□□□□ -0.55
DDR1-275ENST00000514434 BLOC1S3Q6QNY0 202 aa11.59□□□□□ -0.55
DDR1-275ENST00000514434 MTDHQ86UE4 582 aaKnown RBP11.59□□□□□ -0.55
DDR1-275ENST00000514434 TGIF2LYQ8IUE0 185 aa11.59□□□□□ -0.55
DDR1-275ENST00000514434 CCDC103Q8IW40 242 aa11.59□□□□□ -0.55
DDR1-275ENST00000514434 ZNF100Q8IYN0 542 aa11.59□□□□□ -0.55
DDR1-275ENST00000514434 GABRG1Q8N1C3 465 aa11.59□□□□□ -0.55
DDR1-275ENST00000514434 CLIP4Q8N3C7 705 aa11.59□□□□□ -0.55
DDR1-275ENST00000514434 STEAP2Q8NFT2 490 aa11.59□□□□□ -0.55
DDR1-275ENST00000514434 CKAP2Q8WWK9 683 aa11.59□□□□□ -0.55
DDR1-275ENST00000514434 PMM1Q92871 262 aa11.59□□□□□ -0.55
DDR1-275ENST00000514434 KISS1RQ969F8 398 aaPredicted RBP11.59□□□□□ -0.55
DDR1-275ENST00000514434 MBD6Q96DN6 1003 aa11.59□□□□□ -0.55
DDR1-275ENST00000514434 PLPPR2Q96GM1 343 aa11.59□□□□□ -0.55
DDR1-275ENST00000514434 ALPK1Q96QP1 1244 aa11.59□□□□□ -0.55
DDR1-275ENST00000514434 TACO1Q9BSH4 297 aaKnown RBP11.59□□□□□ -0.55
DDR1-275ENST00000514434 VIPAS39Q9H9C1 493 aa11.59□□□□□ -0.55
DDR1-275ENST00000514434 BCO1Q9HAY6 547 aa11.59□□□□□ -0.55
DDR1-275ENST00000514434 GP6Q9HCN6 339 aa11.59□□□□□ -0.55
DDR1-275ENST00000514434 SLC25A37Q9NYZ2 338 aa11.59□□□□□ -0.55
DDR1-275ENST00000514434 CALML5Q9NZT1 146 aa11.59□□□□□ -0.55
DDR1-275ENST00000514434 SLAMF8Q9P0V8 285 aa11.59□□□□□ -0.55
DDR1-275ENST00000514434 DCTN4Q9UJW0 460 aa11.59□□□□□ -0.55
DDR1-275ENST00000514434 ZNF232Q9UNY5 417 aa11.59□□□□□ -0.55
DDR1-275ENST00000514434 ZNF443Q9Y2A4 671 aaPredicted RBP11.59□□□□□ -0.55
DDR1-275ENST00000514434 USF3Q68DE3 2245 aa11.59□□□□□ -0.55
DDR1-275ENST00000514434 A0A0G2JPF8 293 aa11.58□□□□□ -0.56
DDR1-275ENST00000514434 ZC3H12DA2A288 527 aaKnown RBP11.58□□□□□ -0.56
DDR1-275ENST00000514434 HNRNPCL2B2RXH8 293 aa11.58□□□□□ -0.56
DDR1-275ENST00000514434 HNRNPCL3B7ZW38 293 aa11.58□□□□□ -0.56
DDR1-275ENST00000514434 C5orf58C9J3I9 102 aa11.58□□□□□ -0.56
DDR1-275ENST00000514434 KLF4O43474 513 aa11.58□□□□□ -0.56
DDR1-275ENST00000514434 HNRNPCL1O60812 293 aaKnown RBP11.58□□□□□ -0.56
DDR1-275ENST00000514434 RAMP1O60894 148 aa11.58□□□□□ -0.56
DDR1-275ENST00000514434 LYZL6O75951 148 aa11.58□□□□□ -0.56
DDR1-275ENST00000514434 SASH3O75995 380 aa11.58□□□□□ -0.56
DDR1-275ENST00000514434 PLAUP00749 431 aa11.58□□□□□ -0.56
DDR1-275ENST00000514434 HNRNPCL4P0DMR1 293 aa11.58□□□□□ -0.56
DDR1-275ENST00000514434 PRG2P13727 222 aa11.58□□□□□ -0.56
DDR1-275ENST00000514434 NCF2P19878 526 aaPredicted RBP11.58□□□□□ -0.56
DDR1-275ENST00000514434 PSMB1P20618 241 aaKnown RBP11.58□□□□□ -0.56
DDR1-275ENST00000514434 LOXP28300 417 aaPredicted RBP11.58□□□□□ -0.56
DDR1-275ENST00000514434 SLC1A3P43003 542 aa11.58□□□□□ -0.56
DDR1-275ENST00000514434 OR3A2P47893 321 aa11.58□□□□□ -0.56
DDR1-275ENST00000514434 COPZ1P61923 177 aa11.58□□□□□ -0.56
DDR1-275ENST00000514434 HOXC5Q00444 222 aa11.58□□□□□ -0.56
DDR1-275ENST00000514434 PAGE3Q5JUK9 113 aa11.58□□□□□ -0.56
DDR1-275ENST00000514434 SFRP5Q5T4F7 317 aa11.58□□□□□ -0.56
DDR1-275ENST00000514434 BHLHA15Q7RTS1 189 aaPredicted RBP11.58□□□□□ -0.56
DDR1-275ENST00000514434 GALNT5Q7Z7M9 940 aa11.58□□□□□ -0.56
DDR1-275ENST00000514434 ZNF440Q8IYI8 595 aa11.58□□□□□ -0.56
DDR1-275ENST00000514434 UBE2J2Q8N2K1 259 aa11.58□□□□□ -0.56
DDR1-275ENST00000514434 DDIT4LQ96D03 193 aa11.58□□□□□ -0.56
DDR1-275ENST00000514434 MAGEB18Q96M61 343 aa11.58□□□□□ -0.56
DDR1-275ENST00000514434 RAD21L1Q9H4I0 556 aa11.58□□□□□ -0.56
DDR1-275ENST00000514434 EMC3Q9P0I2 261 aa11.58□□□□□ -0.56
DDR1-275ENST00000514434 TMEM181Q9P2C4 612 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms