RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 BAG5Q9UL15 447 aa8.82□□□□□ -1
TOPBP1-209ENST00000513818 TMED7Q9Y3B3 224 aa8.82□□□□□ -1
TOPBP1-209ENST00000513818 FAM215AQ9Y5M1 114 aa8.82□□□□□ -1
TOPBP1-209ENST00000513818 RP1L1Q8IWN7 2480 aaPredicted RBP8.81□□□□□ -1
TOPBP1-209ENST00000513818 ESPL1Q14674 2120 aa8.81□□□□□ -1
TOPBP1-209ENST00000513818 IGHV3-15A0A0B4J1V0 119 aa8.81□□□□□ -1
TOPBP1-209ENST00000513818 FIGNL2A6NMB9 653 aa8.81□□□□□ -1
TOPBP1-209ENST00000513818 CLCA1A8K7I4 914 aa8.81□□□□□ -1
TOPBP1-209ENST00000513818 J3KTA2 159 aa8.81□□□□□ -1
TOPBP1-209ENST00000513818 hCG_2039718K7EN88 272 aa8.81□□□□□ -1
TOPBP1-209ENST00000513818 ETV2O00321 342 aaPredicted RBP8.81□□□□□ -1
TOPBP1-209ENST00000513818 FAAHO00519 579 aa8.81□□□□□ -1
TOPBP1-209ENST00000513818 EBAG9O00559 213 aa8.81□□□□□ -1
TOPBP1-209ENST00000513818 CCL21O00585 134 aa8.81□□□□□ -1
TOPBP1-209ENST00000513818 CXCL13O43927 109 aa8.81□□□□□ -1
TOPBP1-209ENST00000513818 GMNNO75496 209 aa8.81□□□□□ -1
TOPBP1-209ENST00000513818 DNAJC8O75937 253 aaPredicted RBP8.81□□□□□ -1
TOPBP1-209ENST00000513818 PRKD3O94806 890 aa8.81□□□□□ -1
TOPBP1-209ENST00000513818 IFNA14P01570 189 aa8.81□□□□□ -1
TOPBP1-209ENST00000513818 THY1P04216 161 aa8.81□□□□□ -1
TOPBP1-209ENST00000513818 STSP08842 583 aa8.81□□□□□ -1
TOPBP1-209ENST00000513818 TFPIP10646 304 aa8.81□□□□□ -1
TOPBP1-209ENST00000513818 ACVR2AP27037 513 aa8.81□□□□□ -1
TOPBP1-209ENST00000513818 EIF1P41567 113 aaKnown RBP8.81□□□□□ -1
TOPBP1-209ENST00000513818 SLC1A3P43003 542 aa8.81□□□□□ -1
TOPBP1-209ENST00000513818 POLR2HP52434 150 aaKnown RBP8.81□□□□□ -1
TOPBP1-209ENST00000513818 SELENOWP63302 87 aa8.81□□□□□ -1
TOPBP1-209ENST00000513818 ZSWIM7Q19AV6 140 aa8.81□□□□□ -1
TOPBP1-209ENST00000513818 TMEM176BQ3YBM2 270 aaPredicted RBP8.81□□□□□ -1
TOPBP1-209ENST00000513818 GLYR1Q49A26 553 aaPredicted RBP8.81□□□□□ -1
TOPBP1-209ENST00000513818 IFI44LQ53G44 452 aa8.81□□□□□ -1
TOPBP1-209ENST00000513818 ALG10BQ5I7T1 473 aa8.81□□□□□ -1
TOPBP1-209ENST00000513818 C3orf33Q6P1S2 294 aa8.81□□□□□ -1
TOPBP1-209ENST00000513818 WDR88Q6ZMY6 472 aa8.81□□□□□ -1
TOPBP1-209ENST00000513818 SEM1Q6ZVN7 128 aa8.81□□□□□ -1
TOPBP1-209ENST00000513818 FKBP9P1Q75LS8 142 aa8.81□□□□□ -1
TOPBP1-209ENST00000513818 ATG4DQ86TL0 474 aaPredicted RBP8.81□□□□□ -1
TOPBP1-209ENST00000513818 RANBP3LQ86VV4 465 aaPredicted RBP8.81□□□□□ -1
TOPBP1-209ENST00000513818 ADGRG3Q86Y34 549 aa8.81□□□□□ -1
TOPBP1-209ENST00000513818 MEIOBQ8N635 442 aa8.81□□□□□ -1
TOPBP1-209ENST00000513818 BHLHE22Q8NFJ8 381 aaPredicted RBP8.81□□□□□ -1
TOPBP1-209ENST00000513818 OR10D3Q8NH80 312 aa8.81□□□□□ -1
TOPBP1-209ENST00000513818 RASSF5Q8WWW0 418 aa8.81□□□□□ -1
TOPBP1-209ENST00000513818 ADGRG7Q96K78 797 aa8.81□□□□□ -1
TOPBP1-209ENST00000513818 ARL5BQ96KC2 179 aa8.81□□□□□ -1
TOPBP1-209ENST00000513818 OR5B2Q96R09 309 aa8.81□□□□□ -1
TOPBP1-209ENST00000513818 SPOCK3Q9BQ16 436 aa8.81□□□□□ -1
TOPBP1-209ENST00000513818 ZNF559Q9BR84 538 aa8.81□□□□□ -1
TOPBP1-209ENST00000513818 SRXN1Q9BYN0 137 aa8.81□□□□□ -1
TOPBP1-209ENST00000513818 TP63Q9H3D4 680 aaPredicted RBP8.81□□□□□ -1
TOPBP1-209ENST00000513818 RHCGQ9UBD6 479 aa8.81□□□□□ -1
TOPBP1-209ENST00000513818 RPS6KB2Q9UBS0 482 aa8.81□□□□□ -1
TOPBP1-209ENST00000513818 CHRNA9Q9UGM1 479 aa8.81□□□□□ -1
TOPBP1-209ENST00000513818 ERRFI1Q9UJM3 462 aaPredicted RBP8.81□□□□□ -1
TOPBP1-209ENST00000513818 SLC9A8Q9Y2E8 581 aa8.81□□□□□ -1
TOPBP1-209ENST00000513818 AP4B1Q9Y6B7 739 aa8.81□□□□□ -1
TOPBP1-209ENST00000513818 FLNCQ14315 2725 aa8.81□□□□□ -1
TOPBP1-209ENST00000513818 GCN1Q92616 2671 aaKnown RBP8.8□□□□□ -1
TOPBP1-209ENST00000513818 IGKV1D-42A0A075B6H8 117 aa8.8□□□□□ -1
TOPBP1-209ENST00000513818 A0A0B4J2E0 115 aa8.8□□□□□ -1
TOPBP1-209ENST00000513818 A0A1B0GX12 115 aa8.8□□□□□ -1
TOPBP1-209ENST00000513818 KPNA4O00629 521 aaPredicted RBP8.8□□□□□ -1
TOPBP1-209ENST00000513818 GSC2O15499 205 aa8.8□□□□□ -1
TOPBP1-209ENST00000513818 DIRAS1O95057 198 aa8.8□□□□□ -1
TOPBP1-209ENST00000513818 LYPD3O95274 346 aa8.8□□□□□ -1
TOPBP1-209ENST00000513818 TGM6O95932 706 aa8.8□□□□□ -1
TOPBP1-209ENST00000513818 MT-ND1P03886 318 aa8.8□□□□□ -1
TOPBP1-209ENST00000513818 C8BP07358 591 aa8.8□□□□□ -1
TOPBP1-209ENST00000513818 CPN1P15169 458 aa8.8□□□□□ -1
TOPBP1-209ENST00000513818 CXCR1P25024 350 aa8.8□□□□□ -1
TOPBP1-209ENST00000513818 ADH6P28332 368 aa8.8□□□□□ -1
TOPBP1-209ENST00000513818 SLC7A1P30825 629 aa8.8□□□□□ -1
TOPBP1-209ENST00000513818 CASP6P55212 293 aa8.8□□□□□ -1
TOPBP1-209ENST00000513818 CDH12P55289 794 aa8.8□□□□□ -1
TOPBP1-209ENST00000513818 DLX5P56178 289 aa8.8□□□□□ -1
TOPBP1-209ENST00000513818 NUP107P57740 925 aa8.8□□□□□ -1
TOPBP1-209ENST00000513818 TAS2R41P59536 307 aa8.8□□□□□ -1
TOPBP1-209ENST00000513818 RAC1P63000 192 aa8.8□□□□□ -1
TOPBP1-209ENST00000513818 SRSF1Q07955 248 aaKnown RBP eCLIP8.8□□□□□ -1
TOPBP1-209ENST00000513818 PON3Q15166 354 aa8.8□□□□□ -1
TOPBP1-209ENST00000513818 SYT14P1Q58G82 188 aa8.8□□□□□ -1
TOPBP1-209ENST00000513818 HBMQ6B0K9 141 aa8.8□□□□□ -1
TOPBP1-209ENST00000513818 LCN8Q6JVE9 175 aa8.8□□□□□ -1
TOPBP1-209ENST00000513818 C9orf106Q8NAJ2 232 aa8.8□□□□□ -1
TOPBP1-209ENST00000513818 OR2V1Q8NHB1 315 aa8.8□□□□□ -1
TOPBP1-209ENST00000513818 FNDC9Q8TBE3 224 aa8.8□□□□□ -1
TOPBP1-209ENST00000513818 ADAMTS16Q8TE57 1224 aa8.8□□□□□ -1
TOPBP1-209ENST00000513818 PHF10Q8WUB8 498 aaKnown RBP8.8□□□□□ -1
TOPBP1-209ENST00000513818 GEMIN6Q8WXD5 167 aaKnown RBP8.8□□□□□ -1
TOPBP1-209ENST00000513818 LZICQ8WZA0 190 aa8.8□□□□□ -1
TOPBP1-209ENST00000513818 SLC35B4Q969S0 331 aa8.8□□□□□ -1
TOPBP1-209ENST00000513818 MCUR1Q96AQ8 359 aa8.8□□□□□ -1
TOPBP1-209ENST00000513818 CCDC120Q96HB5 630 aa8.8□□□□□ -1
TOPBP1-209ENST00000513818 TRIM2Q9C040 744 aa8.8□□□□□ -1
TOPBP1-209ENST00000513818 AMBRA1Q9C0C7 1298 aa8.8□□□□□ -1
TOPBP1-209ENST00000513818 ADAM19Q9H013 955 aa8.8□□□□□ -1
TOPBP1-209ENST00000513818 LRMDAQ9H2I8 198 aa8.8□□□□□ -1
TOPBP1-209ENST00000513818 GORASP2Q9H8Y8 452 aa8.8□□□□□ -1
TOPBP1-209ENST00000513818 TMEM27Q9HBJ8 222 aa8.8□□□□□ -1
TOPBP1-209ENST00000513818 DCAF13Q9NV06 445 aaKnown RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms